Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2590 and DvMF_2591 are separated by 165 nucleotides DvMF_2591 and DvMF_2592 are separated by 109 nucleotides DvMF_2592 and DvMF_2593 are separated by 170 nucleotides
DvMF_2590: DvMF_2590 - response regulator receiver protein (RefSeq), at 3,275,128 to 3,275,523
_2590
DvMF_2591: DvMF_2591 - transcriptional regulator, BadM/Rrf2 family (RefSeq), at 3,275,689 to 3,276,141
_2591
DvMF_2592: DvMF_2592 - two component transcriptional regulator, Fis family (RefSeq), at 3,276,251 to 3,276,637
_2592
DvMF_2593: DvMF_2593 - protein of unknown function DUF224 cysteine-rich region domain protein (RefSeq), at 3,276,808 to 3,278,199
_2593
Position (kb)
3275
3276
3277 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3274.754 kb on - strand at 3274.885 kb on + strand at 3275.145 kb on + strand at 3275.145 kb on + strand at 3275.145 kb on + strand at 3275.317 kb on - strand, within DvMF_2590 at 3275.591 kb on - strand at 3275.595 kb on - strand at 3275.687 kb on + strand at 3275.695 kb on - strand at 3275.736 kb on + strand, within DvMF_2591 at 3275.812 kb on + strand, within DvMF_2591 at 3275.869 kb on + strand, within DvMF_2591 at 3276.448 kb on + strand, within DvMF_2592 at 3276.667 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 3,274,754 - -0.3 3,274,885 + -3.0 3,275,145 + -0.9 3,275,145 + -1.5 3,275,145 + -0.6 3,275,317 - DvMF_2590 0.48 -0.4 3,275,591 - -2.1 3,275,595 - -0.5 3,275,687 + -0.4 3,275,695 - -1.8 3,275,736 + DvMF_2591 0.10 -2.3 3,275,812 + DvMF_2591 0.27 -0.7 3,275,869 + DvMF_2591 0.40 -1.5 3,276,448 + DvMF_2592 0.51 -0.9 3,276,667 + -0.6
Or see this region's nucleotide sequence