Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2533 and DvMF_2534 are separated by 7 nucleotides DvMF_2534 and DvMF_2535 are separated by 113 nucleotides DvMF_2535 and DvMF_2536 are separated by 27 nucleotides
DvMF_2533: DvMF_2533 - formate dehydrogenase, alpha subunit (RefSeq), at 3,196,674 to 3,199,706
_2533
DvMF_2534: DvMF_2534 - formate dehydrogenase beta subunit (RefSeq), at 3,199,714 to 3,200,466
_2534
DvMF_2535: DvMF_2535 - Methyltransferase type 11 (RefSeq), at 3,200,580 to 3,201,257
_2535
DvMF_2536: DvMF_2536 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 3,201,285 to 3,202,718
_2536
Position (kb)
3199
3200
3201 Strain fitness (log2 ratio)
-2
-1
0
1 at 3198.806 kb on - strand, within DvMF_2533 at 3198.886 kb on - strand, within DvMF_2533 at 3198.913 kb on + strand, within DvMF_2533 at 3199.001 kb on + strand, within DvMF_2533 at 3199.011 kb on + strand, within DvMF_2533 at 3199.220 kb on - strand, within DvMF_2533 at 3199.248 kb on + strand, within DvMF_2533 at 3199.248 kb on + strand, within DvMF_2533 at 3199.249 kb on - strand, within DvMF_2533 at 3199.256 kb on - strand, within DvMF_2533 at 3199.256 kb on - strand, within DvMF_2533 at 3199.268 kb on + strand, within DvMF_2533 at 3199.302 kb on - strand, within DvMF_2533 at 3199.419 kb on + strand at 3199.701 kb on + strand at 3199.755 kb on - strand at 3199.878 kb on + strand, within DvMF_2534 at 3199.900 kb on + strand, within DvMF_2534 at 3199.952 kb on + strand, within DvMF_2534 at 3199.960 kb on - strand, within DvMF_2534 at 3200.340 kb on - strand, within DvMF_2534 at 3200.461 kb on + strand at 3200.461 kb on + strand at 3200.461 kb on + strand at 3200.469 kb on - strand at 3200.469 kb on - strand at 3200.498 kb on - strand at 3200.577 kb on + strand at 3200.818 kb on + strand, within DvMF_2535 at 3200.818 kb on + strand, within DvMF_2535 at 3200.826 kb on - strand, within DvMF_2535 at 3201.142 kb on - strand, within DvMF_2535 at 3201.215 kb on + strand at 3201.223 kb on - strand at 3201.339 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 3,198,806 - DvMF_2533 0.70 -0.2 3,198,886 - DvMF_2533 0.73 -1.0 3,198,913 + DvMF_2533 0.74 -0.4 3,199,001 + DvMF_2533 0.77 +0.6 3,199,011 + DvMF_2533 0.77 -0.4 3,199,220 - DvMF_2533 0.84 +1.0 3,199,248 + DvMF_2533 0.85 -0.7 3,199,248 + DvMF_2533 0.85 -0.7 3,199,249 - DvMF_2533 0.85 -0.7 3,199,256 - DvMF_2533 0.85 -0.2 3,199,256 - DvMF_2533 0.85 -0.8 3,199,268 + DvMF_2533 0.86 -2.6 3,199,302 - DvMF_2533 0.87 -1.4 3,199,419 + -0.4 3,199,701 + -1.2 3,199,755 - +0.2 3,199,878 + DvMF_2534 0.22 -1.1 3,199,900 + DvMF_2534 0.25 -0.7 3,199,952 + DvMF_2534 0.32 +0.4 3,199,960 - DvMF_2534 0.33 -0.6 3,200,340 - DvMF_2534 0.83 -0.8 3,200,461 + -1.0 3,200,461 + -0.5 3,200,461 + +0.7 3,200,469 - -0.1 3,200,469 - -0.9 3,200,498 - +0.8 3,200,577 + -0.5 3,200,818 + DvMF_2535 0.35 -0.5 3,200,818 + DvMF_2535 0.35 -0.8 3,200,826 - DvMF_2535 0.36 -1.1 3,201,142 - DvMF_2535 0.83 -1.6 3,201,215 + -1.7 3,201,223 - +0.7 3,201,339 + -1.6
Or see this region's nucleotide sequence