Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2411
Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with 2-Furfuraldehyde 0.0625 % |
---|---|---|---|---|---|
remove | |||||
3,048,926 | + | DvMF_2410 | 0.55 | -0.2 | |
3,049,566 | + | DvMF_2410 | 0.87 | -4.2 | |
3,049,592 | + | DvMF_2410 | 0.88 | +0.5 | |
3,049,729 | + | -2.4 | |||
3,049,738 | + | +0.4 | |||
3,049,810 | + | -0.1 | |||
3,050,177 | - | DvMF_2411 | 0.25 | -0.2 | |
3,050,227 | + | DvMF_2411 | 0.29 | -0.1 | |
3,050,269 | - | DvMF_2411 | 0.32 | +0.5 | |
3,050,295 | + | DvMF_2411 | 0.34 | +0.4 | |
3,050,460 | + | DvMF_2411 | 0.47 | +0.1 | |
3,050,542 | + | DvMF_2411 | 0.53 | -1.0 | |
3,050,696 | + | DvMF_2411 | 0.64 | -0.3 | |
3,050,910 | + | DvMF_2411 | 0.80 | -1.0 | |
3,051,112 | - | -0.6 | |||
3,051,260 | + | -1.2 | |||
3,051,279 | + | -2.0 | |||
3,051,287 | - | -0.6 | |||
3,051,287 | - | -0.3 | |||
3,051,300 | - | -0.7 | |||
3,051,461 | + | DvMF_2412 | 0.22 | -0.7 | |
3,051,510 | - | DvMF_2412 | 0.27 | -0.6 | |
3,051,537 | - | DvMF_2412 | 0.29 | -0.1 | |
3,051,578 | - | DvMF_2412 | 0.33 | -0.3 | |
3,051,666 | + | DvMF_2412 | 0.42 | -0.3 | |
3,051,736 | - | DvMF_2412 | 0.48 | -0.1 | |
3,051,972 | - | DvMF_2412 | 0.71 | -1.2 | |
3,051,990 | + | DvMF_2412 | 0.73 | +1.0 |
Or see this region's nucleotide sequence