Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt flgB and DvMF_2285 overlap by 1 nucleotides DvMF_2285 and DvMF_2286 are separated by 19 nucleotides DvMF_2286 and DvMF_2287 are separated by 316 nucleotides
DvMF_2284: flgB - flagellar basal body rod protein FlgB (RefSeq), at 2,873,035 to 2,873,445
flgB
DvMF_2285: DvMF_2285 - flagellar basal-body rod protein FlgC (RefSeq), at 2,873,445 to 2,873,882
_2285
DvMF_2286: DvMF_2286 - flagellar hook-basal body complex subunit FliE (RefSeq), at 2,873,902 to 2,874,234
_2286
DvMF_2287: DvMF_2287 - flagellar M-ring protein FliF (RefSeq), at 2,874,551 to 2,876,170
_2287
Position (kb)
2873
2874
2875 Strain fitness (log2 ratio)
-1
0
1 at 2873.064 kb on - strand at 2873.236 kb on + strand, within flgB at 2873.403 kb on + strand, within flgB at 2873.566 kb on - strand, within DvMF_2285 at 2873.566 kb on - strand, within DvMF_2285 at 2873.817 kb on - strand, within DvMF_2285 at 2874.020 kb on - strand, within DvMF_2286 at 2874.219 kb on - strand at 2874.503 kb on + strand at 2874.506 kb on - strand at 2874.508 kb on + strand at 2874.583 kb on + strand at 2874.643 kb on - strand at 2874.837 kb on + strand, within DvMF_2287 at 2874.877 kb on - strand, within DvMF_2287 at 2874.909 kb on - strand, within DvMF_2287 at 2874.909 kb on - strand, within DvMF_2287 at 2875.111 kb on - strand, within DvMF_2287 at 2875.170 kb on + strand, within DvMF_2287 at 2875.194 kb on + strand, within DvMF_2287 at 2875.206 kb on - strand, within DvMF_2287
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 2,873,064 - +0.6 2,873,236 + flgB DvMF_2284 0.49 +1.1 2,873,403 + flgB DvMF_2284 0.90 +1.1 2,873,566 - DvMF_2285 0.28 +1.4 2,873,566 - DvMF_2285 0.28 +1.4 2,873,817 - DvMF_2285 0.85 +1.3 2,874,020 - DvMF_2286 0.35 +1.3 2,874,219 - +1.3 2,874,503 + -0.8 2,874,506 - -1.0 2,874,508 + +0.1 2,874,583 + +0.9 2,874,643 - -0.6 2,874,837 + DvMF_2287 0.18 +1.6 2,874,877 - DvMF_2287 0.20 +0.5 2,874,909 - DvMF_2287 0.22 +0.6 2,874,909 - DvMF_2287 0.22 +0.9 2,875,111 - DvMF_2287 0.35 +1.0 2,875,170 + DvMF_2287 0.38 +0.6 2,875,194 + DvMF_2287 0.40 +0.3 2,875,206 - DvMF_2287 0.40 +1.0
Or see this region's nucleotide sequence