Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2142 and DvMF_2143 are separated by 59 nucleotides DvMF_2143 and DvMF_2144 are separated by 94 nucleotides DvMF_2144 and DvMF_2145 overlap by 4 nucleotides
DvMF_2142: DvMF_2142 - dihydroorotate oxidase B, electron transfer subunit (RefSeq), at 2,668,098 to 2,668,967
_2142
DvMF_2143: DvMF_2143 - dihydroorotate dehydrogenase family protein (RefSeq), at 2,669,027 to 2,669,953
_2143
DvMF_2144: DvMF_2144 - GCN5-related N-acetyltransferase (RefSeq), at 2,670,048 to 2,670,587
_2144
DvMF_2145: DvMF_2145 - Protein of unknown function DUF1778 (RefSeq), at 2,670,584 to 2,670,856
_2145
Position (kb)
2669
2670 Strain fitness (log2 ratio)
-2
-1
0
1 at 2668.085 kb on + strand at 2668.469 kb on + strand, within DvMF_2142 at 2668.477 kb on + strand, within DvMF_2142 at 2668.582 kb on - strand, within DvMF_2142 at 2669.167 kb on + strand, within DvMF_2143 at 2669.197 kb on + strand, within DvMF_2143 at 2669.197 kb on + strand, within DvMF_2143 at 2669.485 kb on + strand, within DvMF_2143 at 2669.657 kb on - strand, within DvMF_2143 at 2669.665 kb on + strand, within DvMF_2143 at 2669.929 kb on + strand at 2670.045 kb on + strand at 2670.045 kb on + strand at 2670.053 kb on - strand at 2670.053 kb on - strand at 2670.281 kb on + strand, within DvMF_2144 at 2670.416 kb on - strand, within DvMF_2144 at 2670.755 kb on + strand, within DvMF_2145
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 2,668,085 + +0.1 2,668,469 + DvMF_2142 0.43 -1.9 2,668,477 + DvMF_2142 0.44 -0.5 2,668,582 - DvMF_2142 0.56 -0.3 2,669,167 + DvMF_2143 0.15 -1.4 2,669,197 + DvMF_2143 0.18 -2.4 2,669,197 + DvMF_2143 0.18 -2.3 2,669,485 + DvMF_2143 0.49 -2.7 2,669,657 - DvMF_2143 0.68 -0.2 2,669,665 + DvMF_2143 0.69 +0.7 2,669,929 + -0.9 2,670,045 + -0.3 2,670,045 + -0.8 2,670,053 - -0.5 2,670,053 - -0.8 2,670,281 + DvMF_2144 0.43 -0.8 2,670,416 - DvMF_2144 0.68 -0.6 2,670,755 + DvMF_2145 0.63 -2.5
Or see this region's nucleotide sequence