Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2073 and DvMF_2074 are separated by 168 nucleotides DvMF_2074 and DvMF_2075 are separated by 652 nucleotides
DvMF_2073: DvMF_2073 - hypothetical protein (RefSeq), at 2,573,304 to 2,574,506
_2073
DvMF_2074: DvMF_2074 - glycosyl transferase family 2 (RefSeq), at 2,574,675 to 2,575,799
_2074
DvMF_2075: DvMF_2075 - fumarate hydratase, class II (RefSeq), at 2,576,452 to 2,578,038
_2075
Position (kb)
2574
2575
2576 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2573.791 kb on - strand, within DvMF_2073 at 2573.822 kb on + strand, within DvMF_2073 at 2574.043 kb on - strand, within DvMF_2073 at 2574.043 kb on - strand, within DvMF_2073 at 2574.103 kb on - strand, within DvMF_2073 at 2574.313 kb on - strand, within DvMF_2073 at 2574.575 kb on - strand at 2574.703 kb on - strand at 2574.763 kb on - strand at 2574.779 kb on + strand at 2574.943 kb on - strand, within DvMF_2074 at 2574.962 kb on - strand, within DvMF_2074 at 2574.990 kb on + strand, within DvMF_2074 at 2574.997 kb on + strand, within DvMF_2074 at 2575.005 kb on - strand, within DvMF_2074 at 2575.066 kb on + strand, within DvMF_2074 at 2575.080 kb on + strand, within DvMF_2074 at 2575.088 kb on - strand, within DvMF_2074 at 2575.113 kb on - strand, within DvMF_2074 at 2575.128 kb on - strand, within DvMF_2074 at 2575.128 kb on - strand, within DvMF_2074 at 2575.213 kb on + strand, within DvMF_2074 at 2575.389 kb on - strand, within DvMF_2074 at 2575.532 kb on + strand, within DvMF_2074 at 2575.640 kb on + strand, within DvMF_2074 at 2575.662 kb on + strand, within DvMF_2074 at 2575.704 kb on - strand at 2575.746 kb on - strand at 2575.964 kb on - strand at 2575.966 kb on + strand at 2576.015 kb on + strand at 2576.089 kb on - strand at 2576.123 kb on + strand at 2576.268 kb on - strand at 2576.371 kb on - strand at 2576.470 kb on - strand at 2576.472 kb on + strand at 2576.506 kb on - strand at 2576.605 kb on - strand at 2576.613 kb on + strand, within DvMF_2075 at 2576.680 kb on + strand, within DvMF_2075 at 2576.684 kb on + strand, within DvMF_2075 at 2576.755 kb on + strand, within DvMF_2075
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 2,573,791 - DvMF_2073 0.40 -1.1 2,573,822 + DvMF_2073 0.43 +0.6 2,574,043 - DvMF_2073 0.61 -0.5 2,574,043 - DvMF_2073 0.61 +1.1 2,574,103 - DvMF_2073 0.66 +0.5 2,574,313 - DvMF_2073 0.84 -0.7 2,574,575 - -1.5 2,574,703 - -1.5 2,574,763 - -1.4 2,574,779 + -2.4 2,574,943 - DvMF_2074 0.24 -1.2 2,574,962 - DvMF_2074 0.26 -1.2 2,574,990 + DvMF_2074 0.28 -0.5 2,574,997 + DvMF_2074 0.29 -3.2 2,575,005 - DvMF_2074 0.29 +0.6 2,575,066 + DvMF_2074 0.35 -0.4 2,575,080 + DvMF_2074 0.36 +0.5 2,575,088 - DvMF_2074 0.37 -0.2 2,575,113 - DvMF_2074 0.39 -0.5 2,575,128 - DvMF_2074 0.40 +0.1 2,575,128 - DvMF_2074 0.40 -0.1 2,575,213 + DvMF_2074 0.48 -2.5 2,575,389 - DvMF_2074 0.63 +0.0 2,575,532 + DvMF_2074 0.76 -0.4 2,575,640 + DvMF_2074 0.86 -0.4 2,575,662 + DvMF_2074 0.88 -1.1 2,575,704 - -0.9 2,575,746 - -0.9 2,575,964 - -0.1 2,575,966 + -0.4 2,576,015 + -1.5 2,576,089 - -1.4 2,576,123 + -0.1 2,576,268 - +0.5 2,576,371 - -1.2 2,576,470 - -1.0 2,576,472 + +0.1 2,576,506 - -1.5 2,576,605 - -0.6 2,576,613 + DvMF_2075 0.10 +0.3 2,576,680 + DvMF_2075 0.14 -2.5 2,576,684 + DvMF_2075 0.15 -0.9 2,576,755 + DvMF_2075 0.19 -0.5
Or see this region's nucleotide sequence