Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2039

Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntaspS and DvMF_2039 are separated by 151 nucleotidesDvMF_2039 and DvMF_2040 are separated by 1 nucleotides DvMF_2038: aspS - aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) (from data), at 2,528,054 to 2,529,898 aspS DvMF_2039: DvMF_2039 - peptide deformylase (RefSeq), at 2,530,050 to 2,530,604 _2039 DvMF_2040: DvMF_2040 - methionyl-tRNA formyltransferase (RefSeq), at 2,530,606 to 2,531,715 _2040 Position (kb) 2530 2531Strain fitness (log2 ratio) -2 -1 0 1at 2529.892 kb on + strandat 2529.892 kb on + strandat 2529.899 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 %
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2,529,892 + -2.2
2,529,892 + +0.0
2,529,899 + -1.3

Or see this region's nucleotide sequence