Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1725 and DvMF_1726 are separated by 369 nucleotides DvMF_1726 and DvMF_1727 are separated by 172 nucleotides DvMF_1727 and DvMF_1728 overlap by 4 nucleotides
DvMF_1725: DvMF_1725 - protein of unknown function UPF0150 (RefSeq), at 2,108,877 to 2,109,284
_1725
DvMF_1726: DvMF_1726 - hypothetical protein (RefSeq), at 2,109,654 to 2,109,977
_1726
DvMF_1727: DvMF_1727 - hypothetical protein (RefSeq), at 2,110,150 to 2,110,947
_1727
DvMF_1728: DvMF_1728 - ABC transporter related (RefSeq), at 2,110,944 to 2,111,777
_1728
Position (kb)
2110
2111 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2109.390 kb on - strand at 2109.571 kb on + strand at 2109.571 kb on + strand at 2109.721 kb on + strand, within DvMF_1726 at 2109.891 kb on + strand, within DvMF_1726 at 2110.212 kb on + strand at 2110.235 kb on - strand, within DvMF_1727 at 2110.580 kb on - strand, within DvMF_1727 at 2110.606 kb on + strand, within DvMF_1727 at 2110.655 kb on - strand, within DvMF_1727 at 2110.778 kb on - strand, within DvMF_1727 at 2110.792 kb on - strand, within DvMF_1727 at 2110.794 kb on + strand, within DvMF_1727 at 2111.095 kb on - strand, within DvMF_1728 at 2111.122 kb on + strand, within DvMF_1728 at 2111.175 kb on + strand, within DvMF_1728 at 2111.272 kb on - strand, within DvMF_1728 at 2111.539 kb on + strand, within DvMF_1728 at 2111.681 kb on + strand, within DvMF_1728 at 2111.865 kb on + strand at 2111.905 kb on - strand at 2111.920 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 2,109,390 - -0.6 2,109,571 + -0.8 2,109,571 + -0.1 2,109,721 + DvMF_1726 0.21 -0.8 2,109,891 + DvMF_1726 0.73 -1.0 2,110,212 + -0.9 2,110,235 - DvMF_1727 0.11 -1.5 2,110,580 - DvMF_1727 0.54 -0.9 2,110,606 + DvMF_1727 0.57 -2.4 2,110,655 - DvMF_1727 0.63 +0.2 2,110,778 - DvMF_1727 0.79 -1.1 2,110,792 - DvMF_1727 0.80 -0.2 2,110,794 + DvMF_1727 0.81 +1.1 2,111,095 - DvMF_1728 0.18 -0.6 2,111,122 + DvMF_1728 0.21 -2.7 2,111,175 + DvMF_1728 0.28 -0.7 2,111,272 - DvMF_1728 0.39 -0.0 2,111,539 + DvMF_1728 0.71 -1.3 2,111,681 + DvMF_1728 0.88 -3.1 2,111,865 + +0.7 2,111,905 - +0.8 2,111,920 + -0.3
Or see this region's nucleotide sequence