Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1651 and DvMF_1652 overlap by 1 nucleotides DvMF_1652 and DvMF_1653 are separated by 2 nucleotides DvMF_1653 and DvMF_1654 overlap by 4 nucleotides DvMF_1654 and DvMF_1655 are separated by 45 nucleotides
DvMF_1651: DvMF_1651 - hypothetical protein (RefSeq), at 2,030,300 to 2,030,698
_1651
DvMF_1652: DvMF_1652 - phage head-tail adaptor (RefSeq), at 2,030,698 to 2,031,012
_1652
DvMF_1653: DvMF_1653 - phage conserved hypothetical protein, phiE125 gp8 (RefSeq), at 2,031,015 to 2,031,599
_1653
DvMF_1654: DvMF_1654 - hypothetical protein (RefSeq), at 2,031,596 to 2,031,775
_1654
DvMF_1655: DvMF_1655 - phage major capsid protein, HK97 family (RefSeq), at 2,031,821 to 2,033,041
_1655
Position (kb)
2031
2032 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2030.743 kb on + strand, within DvMF_1652 at 2030.743 kb on + strand, within DvMF_1652 at 2030.900 kb on + strand, within DvMF_1652 at 2030.917 kb on - strand, within DvMF_1652 at 2031.032 kb on + strand at 2031.108 kb on - strand, within DvMF_1653 at 2031.277 kb on + strand, within DvMF_1653 at 2031.304 kb on - strand, within DvMF_1653 at 2031.310 kb on + strand, within DvMF_1653 at 2031.489 kb on - strand, within DvMF_1653 at 2031.529 kb on - strand, within DvMF_1653 at 2031.538 kb on + strand, within DvMF_1653 at 2031.538 kb on + strand, within DvMF_1653 at 2031.546 kb on - strand at 2031.604 kb on + strand at 2031.660 kb on + strand, within DvMF_1654 at 2031.660 kb on + strand, within DvMF_1654 at 2031.660 kb on + strand, within DvMF_1654 at 2032.047 kb on - strand, within DvMF_1655 at 2032.079 kb on - strand, within DvMF_1655 at 2032.483 kb on - strand, within DvMF_1655 at 2032.613 kb on + strand, within DvMF_1655
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 2,030,743 + DvMF_1652 0.14 -1.7 2,030,743 + DvMF_1652 0.14 +1.3 2,030,900 + DvMF_1652 0.64 -0.8 2,030,917 - DvMF_1652 0.70 +1.4 2,031,032 + -0.3 2,031,108 - DvMF_1653 0.16 -0.2 2,031,277 + DvMF_1653 0.45 -0.8 2,031,304 - DvMF_1653 0.49 +0.0 2,031,310 + DvMF_1653 0.50 +0.3 2,031,489 - DvMF_1653 0.81 +0.1 2,031,529 - DvMF_1653 0.88 -0.8 2,031,538 + DvMF_1653 0.89 -1.7 2,031,538 + DvMF_1653 0.89 -0.8 2,031,546 - -3.1 2,031,604 + -0.5 2,031,660 + DvMF_1654 0.36 -1.8 2,031,660 + DvMF_1654 0.36 -1.0 2,031,660 + DvMF_1654 0.36 -0.3 2,032,047 - DvMF_1655 0.19 +0.1 2,032,079 - DvMF_1655 0.21 -0.3 2,032,483 - DvMF_1655 0.54 -1.8 2,032,613 + DvMF_1655 0.65 -0.4
Or see this region's nucleotide sequence