Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1602
Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with 2-Furfuraldehyde 0.0625 % |
---|---|---|---|---|---|
remove | |||||
1,971,959 | - | DvMF_1601 | 0.38 | -0.2 | |
1,972,038 | + | DvMF_1601 | 0.43 | +0.5 | |
1,972,046 | - | DvMF_1601 | 0.44 | -1.7 | |
1,972,065 | + | DvMF_1601 | 0.45 | -0.2 | |
1,972,230 | + | DvMF_1601 | 0.56 | +0.7 | |
1,972,254 | - | DvMF_1601 | 0.58 | +0.7 | |
1,972,316 | + | DvMF_1601 | 0.62 | +0.1 | |
1,972,323 | + | DvMF_1601 | 0.62 | -1.2 | |
1,972,392 | - | DvMF_1601 | 0.67 | -0.9 | |
1,972,418 | - | DvMF_1601 | 0.69 | -0.4 | |
1,972,525 | + | DvMF_1601 | 0.76 | -1.3 | |
1,972,549 | + | DvMF_1601 | 0.77 | +0.6 | |
1,972,640 | + | DvMF_1601 | 0.83 | -3.4 | |
1,972,761 | + | -0.5 | |||
1,972,968 | - | DvMF_1602 | 0.26 | +0.4 | |
1,972,973 | - | DvMF_1602 | 0.28 | +2.0 | |
1,973,042 | + | DvMF_1602 | 0.55 | +0.9 | |
1,973,135 | - | +0.2 | |||
1,973,140 | - | -2.4 | |||
1,973,297 | - | -0.3 | |||
1,973,308 | - | -1.4 | |||
1,973,308 | - | -2.0 | |||
1,973,323 | - | DvMF_1603 | 0.10 | -1.9 | |
1,973,521 | - | DvMF_1603 | 0.21 | +0.1 | |
1,973,554 | - | DvMF_1603 | 0.23 | -3.7 | |
1,973,659 | - | DvMF_1603 | 0.29 | -0.9 | |
1,973,913 | - | DvMF_1603 | 0.43 | -0.5 | |
1,974,154 | + | DvMF_1603 | 0.57 | +0.6 |
Or see this region's nucleotide sequence