Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1523 and DvMF_1524 are separated by 215 nucleotides DvMF_1524 and DvMF_1525 are separated by 122 nucleotides DvMF_1525 and DvMF_1526 are separated by 305 nucleotides
DvMF_1523: DvMF_1523 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 1,878,423 to 1,878,818
_1523
DvMF_1524: DvMF_1524 - flavin reductase domain protein FMN-binding (RefSeq), at 1,879,034 to 1,879,681
_1524
DvMF_1525: DvMF_1525 - Antibiotic biosynthesis monooxygenase (RefSeq), at 1,879,804 to 1,880,109
_1525
DvMF_1526: DvMF_1526 - chromate transporter, chromate ion transporter (CHR) family (RefSeq), at 1,880,415 to 1,881,662
_1526
Position (kb)
1879
1880
1881 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1879.039 kb on - strand at 1879.118 kb on - strand, within DvMF_1524 at 1879.367 kb on + strand, within DvMF_1524 at 1879.375 kb on - strand, within DvMF_1524 at 1879.375 kb on - strand, within DvMF_1524 at 1879.432 kb on - strand, within DvMF_1524 at 1879.508 kb on - strand, within DvMF_1524 at 1879.787 kb on + strand at 1879.795 kb on - strand at 1880.029 kb on + strand, within DvMF_1525 at 1880.137 kb on - strand at 1880.142 kb on - strand at 1880.161 kb on - strand at 1880.161 kb on - strand at 1880.465 kb on - strand at 1880.475 kb on - strand at 1880.502 kb on - strand at 1880.509 kb on + strand at 1880.513 kb on + strand at 1880.791 kb on - strand, within DvMF_1526 at 1880.909 kb on - strand, within DvMF_1526
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 1,879,039 - -2.1 1,879,118 - DvMF_1524 0.13 -1.1 1,879,367 + DvMF_1524 0.51 -0.2 1,879,375 - DvMF_1524 0.53 -0.6 1,879,375 - DvMF_1524 0.53 -0.7 1,879,432 - DvMF_1524 0.61 -2.2 1,879,508 - DvMF_1524 0.73 +0.3 1,879,787 + -0.3 1,879,795 - -2.9 1,880,029 + DvMF_1525 0.74 -2.4 1,880,137 - -0.2 1,880,142 - +0.1 1,880,161 - -0.8 1,880,161 - -0.1 1,880,465 - -0.8 1,880,475 - -0.5 1,880,502 - -2.1 1,880,509 + -0.8 1,880,513 + -2.8 1,880,791 - DvMF_1526 0.30 -1.4 1,880,909 - DvMF_1526 0.40 -3.4
Or see this region's nucleotide sequence