Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1153 and DvMF_1154 are separated by 168 nucleotides DvMF_1154 and DvMF_1155 are separated by 135 nucleotides DvMF_1155 and DvMF_1156 are separated by 306 nucleotides
DvMF_1153: DvMF_1153 - Phenylacetate--CoA ligase (RefSeq), at 1,414,629 to 1,415,933
_1153
DvMF_1154: DvMF_1154 - protein of unknown function DUF456 (RefSeq), at 1,416,102 to 1,416,611
_1154
DvMF_1155: DvMF_1155 - RNA methyltransferase, TrmH family, group 1 (RefSeq), at 1,416,747 to 1,417,547
_1155
DvMF_1156: DvMF_1156 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 1,417,854 to 1,420,274
_1156
Position (kb)
1416
1417
1418 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1415.839 kb on + strand at 1415.847 kb on - strand at 1415.910 kb on - strand at 1416.053 kb on + strand at 1416.162 kb on - strand, within DvMF_1154 at 1416.591 kb on + strand at 1416.596 kb on + strand at 1416.604 kb on - strand at 1416.647 kb on + strand at 1416.890 kb on + strand, within DvMF_1155 at 1416.990 kb on - strand, within DvMF_1155 at 1417.042 kb on - strand, within DvMF_1155 at 1417.066 kb on + strand, within DvMF_1155 at 1417.069 kb on - strand, within DvMF_1155 at 1417.210 kb on - strand, within DvMF_1155 at 1417.220 kb on - strand, within DvMF_1155 at 1417.241 kb on - strand, within DvMF_1155 at 1417.259 kb on + strand, within DvMF_1155 at 1417.487 kb on + strand at 1417.490 kb on - strand at 1417.677 kb on - strand at 1417.865 kb on - strand at 1417.924 kb on + strand at 1417.961 kb on + strand at 1418.151 kb on + strand, within DvMF_1156 at 1418.151 kb on + strand, within DvMF_1156 at 1418.225 kb on + strand, within DvMF_1156 at 1418.225 kb on - strand, within DvMF_1156 at 1418.433 kb on + strand, within DvMF_1156 at 1418.433 kb on + strand, within DvMF_1156 at 1418.445 kb on + strand, within DvMF_1156 at 1418.515 kb on + strand, within DvMF_1156
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 1,415,839 + -0.3 1,415,847 - +0.4 1,415,910 - -1.1 1,416,053 + -0.5 1,416,162 - DvMF_1154 0.12 -1.3 1,416,591 + -0.0 1,416,596 + -1.6 1,416,604 - -1.2 1,416,647 + -0.7 1,416,890 + DvMF_1155 0.18 -1.3 1,416,990 - DvMF_1155 0.30 -0.5 1,417,042 - DvMF_1155 0.37 -1.6 1,417,066 + DvMF_1155 0.40 -1.8 1,417,069 - DvMF_1155 0.40 -0.6 1,417,210 - DvMF_1155 0.58 -2.1 1,417,220 - DvMF_1155 0.59 -3.1 1,417,241 - DvMF_1155 0.62 -3.4 1,417,259 + DvMF_1155 0.64 -0.8 1,417,487 + -0.3 1,417,490 - -0.6 1,417,677 - -2.0 1,417,865 - -1.1 1,417,924 + -0.7 1,417,961 + -3.6 1,418,151 + DvMF_1156 0.12 -0.2 1,418,151 + DvMF_1156 0.12 -1.1 1,418,225 + DvMF_1156 0.15 -0.8 1,418,225 - DvMF_1156 0.15 -0.0 1,418,433 + DvMF_1156 0.24 -0.2 1,418,433 + DvMF_1156 0.24 -0.3 1,418,445 + DvMF_1156 0.24 +1.0 1,418,515 + DvMF_1156 0.27 -0.9
Or see this region's nucleotide sequence