Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1063 and DvMF_1064 are separated by 1 nucleotides DvMF_1064 and DvMF_1065 are separated by 164 nucleotides DvMF_1065 and DvMF_1066 are separated by 3 nucleotides DvMF_1066 and DvMF_1067 overlap by 4 nucleotides
DvMF_1063: DvMF_1063 - hypothetical protein (RefSeq), at 1,304,498 to 1,305,007
_1063
DvMF_1064: DvMF_1064 - hypothetical protein (RefSeq), at 1,305,009 to 1,305,587
_1064
DvMF_1065: DvMF_1065 - hypothetical protein (RefSeq), at 1,305,752 to 1,307,830
_1065
DvMF_1066: DvMF_1066 - hypothetical protein (RefSeq), at 1,307,834 to 1,308,430
_1066
DvMF_1067: DvMF_1067 - hypothetical protein (RefSeq), at 1,308,427 to 1,309,047
_1067
Position (kb)
1305
1306
1307
1308 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1304.840 kb on - strand, within DvMF_1063 at 1304.950 kb on + strand, within DvMF_1063 at 1305.084 kb on - strand, within DvMF_1064 at 1305.350 kb on - strand, within DvMF_1064 at 1305.434 kb on + strand, within DvMF_1064 at 1305.485 kb on - strand, within DvMF_1064 at 1305.717 kb on - strand at 1305.838 kb on + strand at 1305.893 kb on + strand at 1305.918 kb on + strand at 1305.931 kb on - strand at 1305.968 kb on - strand, within DvMF_1065 at 1306.082 kb on + strand, within DvMF_1065 at 1306.408 kb on + strand, within DvMF_1065 at 1306.454 kb on - strand, within DvMF_1065 at 1306.479 kb on - strand, within DvMF_1065 at 1306.479 kb on - strand, within DvMF_1065 at 1306.594 kb on - strand, within DvMF_1065 at 1306.763 kb on + strand, within DvMF_1065 at 1306.894 kb on + strand, within DvMF_1065 at 1307.128 kb on - strand, within DvMF_1065 at 1307.184 kb on + strand, within DvMF_1065 at 1307.212 kb on - strand, within DvMF_1065 at 1307.247 kb on - strand, within DvMF_1065 at 1307.333 kb on - strand, within DvMF_1065 at 1307.443 kb on + strand, within DvMF_1065 at 1307.471 kb on + strand, within DvMF_1065 at 1307.506 kb on - strand, within DvMF_1065 at 1307.602 kb on + strand, within DvMF_1065 at 1307.999 kb on + strand, within DvMF_1066 at 1308.084 kb on + strand, within DvMF_1066 at 1308.156 kb on - strand, within DvMF_1066 at 1308.312 kb on + strand, within DvMF_1066 at 1308.383 kb on + strand at 1308.644 kb on + strand, within DvMF_1067 at 1308.721 kb on + strand, within DvMF_1067 at 1308.729 kb on + strand, within DvMF_1067
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 1,304,840 - DvMF_1063 0.67 -2.6 1,304,950 + DvMF_1063 0.89 -0.8 1,305,084 - DvMF_1064 0.13 -2.6 1,305,350 - DvMF_1064 0.59 -4.1 1,305,434 + DvMF_1064 0.73 -0.5 1,305,485 - DvMF_1064 0.82 -0.6 1,305,717 - +0.2 1,305,838 + -0.5 1,305,893 + -1.5 1,305,918 + -0.8 1,305,931 - +0.8 1,305,968 - DvMF_1065 0.10 -0.5 1,306,082 + DvMF_1065 0.16 -1.1 1,306,408 + DvMF_1065 0.32 -1.9 1,306,454 - DvMF_1065 0.34 -2.4 1,306,479 - DvMF_1065 0.35 -0.9 1,306,479 - DvMF_1065 0.35 -0.4 1,306,594 - DvMF_1065 0.41 +0.2 1,306,763 + DvMF_1065 0.49 -1.7 1,306,894 + DvMF_1065 0.55 -0.9 1,307,128 - DvMF_1065 0.66 -0.5 1,307,184 + DvMF_1065 0.69 -0.9 1,307,212 - DvMF_1065 0.70 -0.8 1,307,247 - DvMF_1065 0.72 -1.3 1,307,333 - DvMF_1065 0.76 -0.7 1,307,443 + DvMF_1065 0.81 -3.9 1,307,471 + DvMF_1065 0.83 -0.9 1,307,506 - DvMF_1065 0.84 -1.1 1,307,602 + DvMF_1065 0.89 -1.1 1,307,999 + DvMF_1066 0.28 -0.5 1,308,084 + DvMF_1066 0.42 -2.5 1,308,156 - DvMF_1066 0.54 +0.8 1,308,312 + DvMF_1066 0.80 -0.5 1,308,383 + -0.1 1,308,644 + DvMF_1067 0.35 -2.5 1,308,721 + DvMF_1067 0.47 -0.0 1,308,729 + DvMF_1067 0.49 -0.8
Or see this region's nucleotide sequence