Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0685 and DvMF_0686 are separated by 43 nucleotides DvMF_0686 and DvMF_0687 are separated by 11 nucleotides DvMF_0687 and DvMF_0688 are separated by 10 nucleotides
DvMF_0685: DvMF_0685 - PEP-CTERM system associated protein (RefSeq), at 826,262 to 827,584
_0685
DvMF_0686: DvMF_0686 - secretion ATPase, PEP-CTERM locus subfamily (RefSeq), at 827,628 to 828,815
_0686
DvMF_0687: DvMF_0687 - exopolysaccharide/PEPCTERM locus tyrosine autokinase (RefSeq), at 828,827 to 829,708
_0687
DvMF_0688: DvMF_0688 - polysaccharide chain length determinant protein, PEP-CTERM locus subfamily (RefSeq), at 829,719 to 831,161
_0688
Position (kb) 827
828
829 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 826.647 kb on + strand, within DvMF_0685 at 826.793 kb on + strand, within DvMF_0685 at 827.030 kb on - strand, within DvMF_0685 at 827.140 kb on - strand, within DvMF_0685 at 827.463 kb on - strand at 827.523 kb on + strand at 828.037 kb on + strand, within DvMF_0686 at 828.417 kb on + strand, within DvMF_0686 at 828.598 kb on - strand, within DvMF_0686 at 828.677 kb on + strand, within DvMF_0686 at 828.808 kb on + strand at 828.935 kb on + strand, within DvMF_0687 at 829.158 kb on - strand, within DvMF_0687 at 829.343 kb on + strand, within DvMF_0687 at 829.348 kb on + strand, within DvMF_0687 at 829.351 kb on - strand, within DvMF_0687 at 829.538 kb on - strand, within DvMF_0687 at 829.717 kb on + strand at 829.725 kb on - strand at 829.725 kb on - strand at 829.725 kb on - strand at 829.804 kb on - strand at 829.815 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 826,647 + DvMF_0685 0.29 -0.8 826,793 + DvMF_0685 0.40 -0.5 827,030 - DvMF_0685 0.58 -2.0 827,140 - DvMF_0685 0.66 -0.7 827,463 - -0.8 827,523 + -1.4 828,037 + DvMF_0686 0.34 -0.3 828,417 + DvMF_0686 0.66 -2.0 828,598 - DvMF_0686 0.82 -0.3 828,677 + DvMF_0686 0.88 -3.2 828,808 + -0.5 828,935 + DvMF_0687 0.12 -0.5 829,158 - DvMF_0687 0.38 -1.1 829,343 + DvMF_0687 0.59 -0.2 829,348 + DvMF_0687 0.59 -2.6 829,351 - DvMF_0687 0.59 +0.9 829,538 - DvMF_0687 0.81 -0.3 829,717 + -4.0 829,725 - -1.3 829,725 - -0.7 829,725 - -3.6 829,804 - -2.7 829,815 - -1.1
Or see this region's nucleotide sequence