Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0628 and DvMF_0629 are separated by 9 nucleotides DvMF_0629 and DvMF_0630 overlap by 14 nucleotides DvMF_0630 and DvMF_0631 overlap by 4 nucleotides
DvMF_0628: DvMF_0628 - protein of unknown function DUF214 (RefSeq), at 750,226 to 751,401
_0628
DvMF_0629: DvMF_0629 - protein of unknown function DUF214 (RefSeq), at 751,411 to 752,562
_0629
DvMF_0630: DvMF_0630 - ABC transporter related (RefSeq), at 752,549 to 753,355
_0630
DvMF_0631: DvMF_0631 - efflux transporter, RND family, MFP subunit (RefSeq), at 753,352 to 754,650
_0631
Position (kb) 751
752
753 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 750.435 kb on - strand, within DvMF_0628 at 750.617 kb on + strand, within DvMF_0628 at 750.694 kb on - strand, within DvMF_0628 at 750.902 kb on - strand, within DvMF_0628 at 751.208 kb on + strand, within DvMF_0628 at 751.277 kb on + strand, within DvMF_0628 at 751.622 kb on + strand, within DvMF_0629 at 751.892 kb on - strand, within DvMF_0629 at 751.953 kb on - strand, within DvMF_0629 at 752.098 kb on - strand, within DvMF_0629 at 752.234 kb on - strand, within DvMF_0629 at 752.491 kb on + strand at 752.628 kb on - strand at 752.808 kb on + strand, within DvMF_0630 at 752.816 kb on - strand, within DvMF_0630 at 752.851 kb on - strand, within DvMF_0630 at 752.933 kb on - strand, within DvMF_0630 at 753.005 kb on + strand, within DvMF_0630 at 753.074 kb on - strand, within DvMF_0630 at 753.188 kb on + strand, within DvMF_0630 at 753.486 kb on + strand, within DvMF_0631
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 750,435 - DvMF_0628 0.18 -0.0 750,617 + DvMF_0628 0.33 -0.8 750,694 - DvMF_0628 0.40 -3.2 750,902 - DvMF_0628 0.57 -0.5 751,208 + DvMF_0628 0.84 -0.9 751,277 + DvMF_0628 0.89 -1.2 751,622 + DvMF_0629 0.18 -1.5 751,892 - DvMF_0629 0.42 -1.4 751,953 - DvMF_0629 0.47 -0.9 752,098 - DvMF_0629 0.60 -1.8 752,234 - DvMF_0629 0.71 -1.6 752,491 + +0.2 752,628 - -0.6 752,808 + DvMF_0630 0.32 -0.3 752,816 - DvMF_0630 0.33 -0.4 752,851 - DvMF_0630 0.37 -2.2 752,933 - DvMF_0630 0.48 +0.2 753,005 + DvMF_0630 0.57 -1.2 753,074 - DvMF_0630 0.65 -1.3 753,188 + DvMF_0630 0.79 -0.5 753,486 + DvMF_0631 0.10 -0.4
Or see this region's nucleotide sequence