Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0472 and DvMF_0473 are separated by 69 nucleotides DvMF_0473 and DvMF_0474 are separated by 168 nucleotides DvMF_0474 and DvMF_0475 are separated by 0 nucleotides
DvMF_0472: DvMF_0472 - hypothetical protein (RefSeq), at 554,737 to 555,705
_0472
DvMF_0473: DvMF_0473 - hypoxanthine phosphoribosyltransferase (RefSeq), at 555,775 to 556,314
_0473
DvMF_0474: DvMF_0474 - acetyltransferase (RefSeq), at 556,483 to 556,950
_0474
DvMF_0475: DvMF_0475 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq), at 556,951 to 557,424
_0475
Position (kb) 555
556
557 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 554.827 kb on - strand at 554.847 kb on - strand, within DvMF_0472 at 555.112 kb on + strand, within DvMF_0472 at 555.227 kb on - strand, within DvMF_0472 at 555.255 kb on + strand, within DvMF_0472 at 555.315 kb on - strand, within DvMF_0472 at 555.464 kb on + strand, within DvMF_0472 at 555.619 kb on - strand at 555.619 kb on - strand at 555.631 kb on - strand at 555.666 kb on + strand at 555.847 kb on + strand, within DvMF_0473 at 556.066 kb on - strand, within DvMF_0473 at 556.141 kb on + strand, within DvMF_0473 at 556.201 kb on + strand, within DvMF_0473 at 556.276 kb on - strand at 556.524 kb on + strand at 556.659 kb on - strand, within DvMF_0474 at 556.737 kb on + strand, within DvMF_0474 at 556.832 kb on + strand, within DvMF_0474 at 556.882 kb on + strand, within DvMF_0474 at 557.110 kb on - strand, within DvMF_0475 at 557.145 kb on - strand, within DvMF_0475
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 554,827 - +0.8 554,847 - DvMF_0472 0.11 +0.4 555,112 + DvMF_0472 0.39 +1.5 555,227 - DvMF_0472 0.51 -0.0 555,255 + DvMF_0472 0.53 -0.2 555,315 - DvMF_0472 0.60 +0.5 555,464 + DvMF_0472 0.75 +0.7 555,619 - +0.4 555,619 - -0.6 555,631 - +0.9 555,666 + -0.0 555,847 + DvMF_0473 0.13 -3.6 556,066 - DvMF_0473 0.54 -1.7 556,141 + DvMF_0473 0.68 -1.5 556,201 + DvMF_0473 0.79 -0.7 556,276 - -1.5 556,524 + -1.9 556,659 - DvMF_0474 0.38 -0.6 556,737 + DvMF_0474 0.54 -0.9 556,832 + DvMF_0474 0.75 -1.2 556,882 + DvMF_0474 0.85 +2.2 557,110 - DvMF_0475 0.34 -0.2 557,145 - DvMF_0475 0.41 -0.6
Or see this region's nucleotide sequence