Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0332 and DvMF_0333 are separated by 229 nucleotides DvMF_0333 and DvMF_R0016 are separated by 252 nucleotides DvMF_R0016 and DvMF_0334 are separated by 313 nucleotides
DvMF_0332: DvMF_0332 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 387,157 to 388,566
_0332
DvMF_0333: DvMF_0333 - ADP-ribosylation/Crystallin J1 (RefSeq), at 388,796 to 389,899
_0333
DvMF_R0016: DvMF_R0016 - tRNA-Arg (RefSeq), at 390,152 to 390,228
_R0016
DvMF_0334: DvMF_0334 - Glutamate--tRNA ligase (RefSeq), at 390,542 to 391,663
_0334
Position (kb) 388
389
390 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 387.798 kb on + strand, within DvMF_0332 at 388.194 kb on + strand, within DvMF_0332 at 388.203 kb on - strand, within DvMF_0332 at 388.370 kb on + strand, within DvMF_0332 at 388.440 kb on - strand at 388.634 kb on - strand at 388.641 kb on + strand at 388.699 kb on - strand at 388.699 kb on - strand at 388.825 kb on - strand at 388.883 kb on - strand at 389.080 kb on + strand, within DvMF_0333 at 389.088 kb on - strand, within DvMF_0333 at 389.111 kb on - strand, within DvMF_0333 at 389.128 kb on - strand, within DvMF_0333 at 389.159 kb on - strand, within DvMF_0333 at 389.159 kb on - strand, within DvMF_0333 at 389.159 kb on - strand, within DvMF_0333 at 389.224 kb on + strand, within DvMF_0333 at 389.288 kb on + strand, within DvMF_0333 at 389.415 kb on - strand, within DvMF_0333 at 389.595 kb on - strand, within DvMF_0333 at 389.701 kb on + strand, within DvMF_0333 at 389.751 kb on + strand, within DvMF_0333 at 389.796 kb on + strand at 389.804 kb on - strand at 389.823 kb on - strand at 389.892 kb on - strand at 390.034 kb on - strand at 390.053 kb on - strand at 390.735 kb on + strand, within DvMF_0334 at 390.793 kb on + strand, within DvMF_0334 at 390.825 kb on - strand, within DvMF_0334
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 387,798 + DvMF_0332 0.45 -0.6 388,194 + DvMF_0332 0.74 -0.4 388,203 - DvMF_0332 0.74 +0.5 388,370 + DvMF_0332 0.86 -0.2 388,440 - -3.1 388,634 - -1.0 388,641 + -0.6 388,699 - -0.1 388,699 - -0.7 388,825 - -2.4 388,883 - -0.5 389,080 + DvMF_0333 0.26 +0.0 389,088 - DvMF_0333 0.26 -0.6 389,111 - DvMF_0333 0.29 -0.0 389,128 - DvMF_0333 0.30 -0.6 389,159 - DvMF_0333 0.33 -1.1 389,159 - DvMF_0333 0.33 +1.0 389,159 - DvMF_0333 0.33 -0.8 389,224 + DvMF_0333 0.39 -0.9 389,288 + DvMF_0333 0.45 -0.5 389,415 - DvMF_0333 0.56 -0.5 389,595 - DvMF_0333 0.72 -0.2 389,701 + DvMF_0333 0.82 -0.9 389,751 + DvMF_0333 0.87 -0.7 389,796 + -0.0 389,804 - -0.2 389,823 - -0.5 389,892 - -0.8 390,034 - -0.2 390,053 - -2.9 390,735 + DvMF_0334 0.17 -1.3 390,793 + DvMF_0334 0.22 -1.2 390,825 - DvMF_0334 0.25 -1.0
Or see this region's nucleotide sequence