Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0308
Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with 2-Furfuraldehyde 0.0625 % |
|---|---|---|---|---|---|
| remove | |||||
| 355,129 | - | -2.4 | |||
| 355,217 | + | +0.3 | |||
| 355,293 | - | -0.1 | |||
| 355,524 | - | -3.1 | |||
| 355,658 | - | DvMF_0308 | 0.17 | -1.6 | |
| 355,770 | + | DvMF_0308 | 0.25 | -0.1 | |
| 355,772 | - | DvMF_0308 | 0.25 | -2.3 | |
| 355,778 | - | DvMF_0308 | 0.26 | -2.0 | |
| 355,778 | - | DvMF_0308 | 0.26 | -3.3 | |
| 355,778 | - | DvMF_0308 | 0.26 | -1.7 | |
| 355,797 | - | DvMF_0308 | 0.27 | -3.2 | |
| 355,817 | - | DvMF_0308 | 0.28 | -1.2 | |
| 355,852 | - | DvMF_0308 | 0.31 | -3.0 | |
| 356,083 | - | DvMF_0308 | 0.47 | -2.4 | |
| 356,124 | + | DvMF_0308 | 0.50 | -1.6 | |
| 356,280 | - | DvMF_0308 | 0.61 | -3.1 | |
| 357,006 | - | -3.2 | |||
| 357,011 | - | +1.6 | |||
| 357,308 | + | rpsA | DvMF_0309 | 0.11 | -2.3 |
| 357,316 | - | rpsA | DvMF_0309 | 0.11 | -0.6 |
| 357,431 | - | rpsA | DvMF_0309 | 0.18 | -2.9 |
| 357,433 | + | rpsA | DvMF_0309 | 0.18 | +0.5 |
| 357,447 | - | rpsA | DvMF_0309 | 0.19 | -0.5 |
| 357,482 | - | rpsA | DvMF_0309 | 0.21 | -0.1 |
| 357,629 | - | rpsA | DvMF_0309 | 0.30 | -1.5 |
| 357,689 | - | rpsA | DvMF_0309 | 0.33 | +1.6 |
Or see this region's nucleotide sequence