Experiment: MoYLS4 with 2-Furfuraldehyde 0.0625 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0224 and DvMF_0225 are separated by 16 nucleotides DvMF_0225 and DvMF_0226 are separated by 315 nucleotides DvMF_0226 and DvMF_0227 are separated by 242 nucleotides
DvMF_0224: DvMF_0224 - glycine dehydrogenase subunit 1 (RefSeq), at 251,248 to 252,579
_0224
DvMF_0225: DvMF_0225 - glycine cleavage system protein H (RefSeq), at 252,596 to 252,979
_0225
DvMF_0226: DvMF_0226 - response regulator receiver protein (RefSeq), at 253,295 to 253,708
_0226
DvMF_0227: DvMF_0227 - phosphoglucomutase (RefSeq), at 253,951 to 255,600
_0227
Position (kb)
253
254 Strain fitness (log2 ratio)
-2
-1
0
1 at 252.302 kb on + strand, within DvMF_0224 at 252.302 kb on + strand, within DvMF_0224 at 252.358 kb on + strand, within DvMF_0224 at 252.550 kb on - strand at 252.552 kb on + strand at 252.552 kb on + strand at 252.552 kb on + strand at 252.552 kb on + strand at 252.560 kb on - strand at 252.679 kb on + strand, within DvMF_0225 at 252.701 kb on - strand, within DvMF_0225 at 252.995 kb on + strand at 253.061 kb on + strand at 253.082 kb on - strand at 253.112 kb on - strand at 253.152 kb on - strand at 253.252 kb on + strand at 253.666 kb on + strand, within DvMF_0226 at 253.833 kb on + strand at 253.908 kb on + strand at 253.995 kb on - strand at 254.152 kb on - strand, within DvMF_0227 at 254.268 kb on - strand, within DvMF_0227 at 254.305 kb on - strand, within DvMF_0227 at 254.388 kb on - strand, within DvMF_0227 at 254.476 kb on + strand, within DvMF_0227 at 254.484 kb on - strand, within DvMF_0227
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2-Furfuraldehyde 0.0625 % remove 252,302 + DvMF_0224 0.79 +0.1 252,302 + DvMF_0224 0.79 -0.2 252,358 + DvMF_0224 0.83 -0.8 252,550 - -2.4 252,552 + +0.2 252,552 + +0.9 252,552 + -0.2 252,552 + +0.3 252,560 - -1.2 252,679 + DvMF_0225 0.22 -0.7 252,701 - DvMF_0225 0.27 -0.5 252,995 + -0.5 253,061 + -1.4 253,082 - +0.1 253,112 - -1.0 253,152 - -2.0 253,252 + -0.4 253,666 + DvMF_0226 0.90 -2.0 253,833 + -0.8 253,908 + -0.8 253,995 - -0.5 254,152 - DvMF_0227 0.12 +0.2 254,268 - DvMF_0227 0.19 -0.7 254,305 - DvMF_0227 0.21 +0.3 254,388 - DvMF_0227 0.26 +0.1 254,476 + DvMF_0227 0.32 +0.3 254,484 - DvMF_0227 0.32 -1.0
Or see this region's nucleotide sequence