Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1534

Experiment: L-Methionine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_1533 and Dshi_1534 are separated by 71 nucleotidesDshi_1534 and Dshi_1535 overlap by 4 nucleotides Dshi_1533: Dshi_1533 - phosphate ABC transporter, periplasmic phosphate-binding protein (RefSeq), at 1,593,702 to 1,594,727 _1533 Dshi_1534: Dshi_1534 - phosphate ABC transporter, inner membrane subunit PstC (RefSeq), at 1,594,799 to 1,596,268 _1534 Dshi_1535: Dshi_1535 - phosphate ABC transporter, inner membrane subunit PstA (RefSeq), at 1,596,265 to 1,597,617 _1535 Position (kb) 1594 1595 1596 1597Strain fitness (log2 ratio) -1 0 1at 1594.677 kb on - strandat 1594.737 kb on - strandat 1594.741 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Methionine (N)
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1,594,677 - +1.5
1,594,737 - -0.1
1,594,741 + +1.2

Or see this region's nucleotide sequence