Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0281 and Dshi_0282 are separated by 656 nucleotides Dshi_0282 and Dshi_0283 are separated by 80 nucleotides Dshi_0283 and Dshi_0284 are separated by 342 nucleotides
Dshi_0281: Dshi_0281 - YHS domain protein (RefSeq), at 282,323 to 282,814
_0281
Dshi_0282: Dshi_0282 - hypothetical protein (RefSeq), at 283,471 to 283,737
_0282
Dshi_0283: Dshi_0283 - hypothetical protein (RefSeq), at 283,818 to 284,120
_0283
Dshi_0284: Dshi_0284 - hypothetical protein (RefSeq), at 284,463 to 285,113
_0284
Position (kb) 283
284 Strain fitness (log2 ratio) -2
-1
0
1
2 at 282.508 kb on + strand, within Dshi_0281 at 282.529 kb on - strand, within Dshi_0281 at 282.620 kb on - strand, within Dshi_0281 at 282.620 kb on - strand, within Dshi_0281 at 282.644 kb on - strand, within Dshi_0281 at 282.649 kb on - strand, within Dshi_0281 at 282.651 kb on - strand, within Dshi_0281 at 282.667 kb on + strand, within Dshi_0281 at 282.735 kb on - strand, within Dshi_0281 at 282.743 kb on + strand, within Dshi_0281 at 282.743 kb on + strand, within Dshi_0281 at 282.751 kb on - strand, within Dshi_0281 at 282.755 kb on + strand, within Dshi_0281 at 282.763 kb on - strand, within Dshi_0281 at 282.769 kb on + strand at 282.789 kb on + strand at 282.804 kb on + strand at 282.810 kb on - strand at 282.816 kb on + strand at 282.832 kb on + strand at 282.840 kb on - strand at 282.879 kb on + strand at 282.890 kb on + strand at 282.890 kb on + strand at 282.890 kb on + strand at 282.890 kb on + strand at 282.890 kb on + strand at 282.890 kb on + strand at 282.890 kb on + strand at 282.890 kb on + strand at 282.890 kb on + strand at 282.890 kb on + strand at 282.890 kb on + strand at 282.890 kb on + strand at 282.890 kb on + strand at 282.890 kb on + strand at 282.896 kb on + strand at 282.898 kb on - strand at 282.898 kb on - strand at 282.898 kb on - strand at 282.898 kb on - strand at 282.898 kb on - strand at 282.898 kb on - strand at 282.898 kb on - strand at 282.898 kb on - strand at 282.898 kb on - strand at 282.898 kb on - strand at 282.898 kb on - strand at 282.898 kb on - strand at 282.898 kb on - strand at 282.909 kb on + strand at 282.913 kb on + strand at 282.950 kb on + strand at 282.950 kb on + strand at 282.950 kb on + strand at 282.958 kb on - strand at 282.988 kb on - strand at 283.034 kb on - strand at 283.041 kb on + strand at 283.053 kb on - strand at 283.057 kb on - strand at 283.060 kb on + strand at 283.064 kb on + strand at 283.066 kb on + strand at 283.066 kb on + strand at 283.072 kb on - strand at 283.073 kb on - strand at 283.092 kb on + strand at 283.104 kb on + strand at 283.115 kb on + strand at 283.115 kb on + strand at 283.122 kb on + strand at 283.123 kb on - strand at 283.130 kb on - strand at 283.157 kb on - strand at 283.214 kb on + strand at 283.219 kb on + strand at 283.219 kb on + strand at 283.219 kb on + strand at 283.219 kb on + strand at 283.226 kb on + strand at 283.226 kb on + strand at 283.226 kb on + strand at 283.227 kb on - strand at 283.234 kb on - strand at 283.234 kb on - strand at 283.257 kb on + strand at 283.257 kb on + strand at 283.263 kb on + strand at 283.337 kb on + strand at 283.351 kb on - strand at 283.353 kb on + strand at 283.358 kb on + strand at 283.371 kb on + strand at 283.379 kb on - strand at 283.382 kb on + strand at 283.389 kb on + strand at 283.389 kb on + strand at 283.389 kb on + strand at 283.389 kb on + strand at 283.389 kb on + strand at 283.389 kb on + strand at 283.390 kb on - strand at 283.390 kb on - strand at 283.394 kb on + strand at 283.397 kb on - strand at 283.404 kb on + strand at 283.404 kb on + strand at 283.457 kb on - strand at 283.504 kb on - strand, within Dshi_0282 at 283.522 kb on - strand, within Dshi_0282 at 283.542 kb on + strand, within Dshi_0282 at 283.550 kb on - strand, within Dshi_0282 at 283.566 kb on + strand, within Dshi_0282 at 283.577 kb on - strand, within Dshi_0282 at 283.579 kb on + strand, within Dshi_0282 at 283.579 kb on + strand, within Dshi_0282 at 283.579 kb on + strand, within Dshi_0282 at 283.579 kb on + strand, within Dshi_0282 at 283.579 kb on + strand, within Dshi_0282 at 283.579 kb on + strand, within Dshi_0282 at 283.579 kb on + strand, within Dshi_0282 at 283.584 kb on - strand, within Dshi_0282 at 283.587 kb on - strand, within Dshi_0282 at 283.587 kb on - strand, within Dshi_0282 at 283.587 kb on - strand, within Dshi_0282 at 283.597 kb on - strand, within Dshi_0282 at 283.607 kb on + strand, within Dshi_0282 at 283.643 kb on + strand, within Dshi_0282 at 283.643 kb on + strand, within Dshi_0282 at 283.643 kb on + strand, within Dshi_0282 at 283.648 kb on + strand, within Dshi_0282 at 283.648 kb on + strand, within Dshi_0282 at 283.651 kb on - strand, within Dshi_0282 at 283.655 kb on - strand, within Dshi_0282 at 283.663 kb on - strand, within Dshi_0282 at 283.677 kb on + strand, within Dshi_0282 at 283.700 kb on + strand, within Dshi_0282 at 283.711 kb on + strand at 283.711 kb on + strand at 283.713 kb on - strand at 283.724 kb on - strand at 283.732 kb on + strand at 283.732 kb on + strand at 283.732 kb on + strand at 283.746 kb on + strand at 283.748 kb on + strand at 283.748 kb on + strand at 283.748 kb on + strand at 283.748 kb on + strand at 283.750 kb on + strand at 283.756 kb on - strand at 283.756 kb on - strand at 283.756 kb on - strand at 283.761 kb on + strand at 283.766 kb on + strand at 283.776 kb on + strand at 283.784 kb on - strand at 283.787 kb on - strand at 283.787 kb on - strand at 283.798 kb on + strand at 283.802 kb on + strand at 283.813 kb on + strand at 283.816 kb on - strand at 283.816 kb on - strand at 283.821 kb on - strand at 283.821 kb on - strand at 283.832 kb on + strand at 283.832 kb on + strand at 283.832 kb on + strand at 283.835 kb on - strand at 283.840 kb on - strand at 283.840 kb on - strand at 283.850 kb on + strand, within Dshi_0283 at 283.874 kb on + strand, within Dshi_0283 at 283.874 kb on + strand, within Dshi_0283 at 283.887 kb on + strand, within Dshi_0283 at 283.901 kb on + strand, within Dshi_0283 at 283.901 kb on + strand, within Dshi_0283 at 283.909 kb on - strand, within Dshi_0283 at 283.928 kb on + strand, within Dshi_0283 at 283.935 kb on + strand, within Dshi_0283 at 283.935 kb on + strand, within Dshi_0283 at 283.935 kb on + strand, within Dshi_0283 at 283.935 kb on + strand, within Dshi_0283 at 283.936 kb on - strand, within Dshi_0283 at 283.939 kb on - strand, within Dshi_0283 at 283.943 kb on - strand, within Dshi_0283 at 283.944 kb on - strand, within Dshi_0283 at 283.984 kb on + strand, within Dshi_0283 at 283.991 kb on + strand, within Dshi_0283 at 283.991 kb on + strand, within Dshi_0283 at 283.992 kb on - strand, within Dshi_0283 at 283.992 kb on - strand, within Dshi_0283 at 283.999 kb on - strand, within Dshi_0283 at 284.009 kb on + strand, within Dshi_0283 at 284.009 kb on + strand, within Dshi_0283 at 284.057 kb on + strand, within Dshi_0283 at 284.057 kb on + strand, within Dshi_0283 at 284.057 kb on + strand, within Dshi_0283 at 284.057 kb on + strand, within Dshi_0283 at 284.057 kb on + strand, within Dshi_0283 at 284.057 kb on + strand, within Dshi_0283 at 284.057 kb on + strand, within Dshi_0283 at 284.057 kb on + strand, within Dshi_0283 at 284.057 kb on + strand, within Dshi_0283 at 284.057 kb on + strand, within Dshi_0283 at 284.057 kb on + strand, within Dshi_0283 at 284.057 kb on + strand, within Dshi_0283 at 284.065 kb on - strand, within Dshi_0283 at 284.065 kb on - strand, within Dshi_0283 at 284.065 kb on - strand, within Dshi_0283 at 284.065 kb on - strand, within Dshi_0283 at 284.065 kb on - strand, within Dshi_0283 at 284.074 kb on + strand, within Dshi_0283 at 284.074 kb on + strand, within Dshi_0283 at 284.105 kb on - strand at 284.114 kb on + strand at 284.114 kb on + strand at 284.114 kb on + strand at 284.114 kb on + strand at 284.122 kb on - strand at 284.123 kb on + strand at 284.123 kb on + strand at 284.124 kb on + strand at 284.140 kb on + strand at 284.140 kb on + strand at 284.146 kb on + strand at 284.147 kb on + strand at 284.147 kb on + strand at 284.147 kb on + strand at 284.147 kb on + strand at 284.148 kb on - strand at 284.152 kb on + strand at 284.152 kb on + strand at 284.153 kb on + strand at 284.153 kb on + strand at 284.153 kb on + strand at 284.153 kb on + strand at 284.153 kb on + strand at 284.153 kb on + strand at 284.153 kb on + strand at 284.155 kb on - strand at 284.155 kb on - strand at 284.160 kb on + strand at 284.160 kb on - strand at 284.160 kb on - strand at 284.160 kb on - strand at 284.160 kb on - strand at 284.161 kb on - strand at 284.163 kb on + strand at 284.168 kb on - strand at 284.168 kb on - strand at 284.193 kb on + strand at 284.198 kb on + strand at 284.206 kb on - strand at 284.206 kb on - strand at 284.211 kb on + strand at 284.219 kb on - strand at 284.256 kb on - strand at 284.268 kb on + strand at 284.271 kb on - strand at 284.272 kb on - strand at 284.286 kb on + strand at 284.286 kb on + strand at 284.286 kb on + strand at 284.286 kb on + strand at 284.358 kb on + strand at 284.366 kb on + strand at 284.366 kb on + strand at 284.374 kb on - strand at 284.374 kb on - strand at 284.374 kb on - strand at 284.374 kb on - strand at 284.375 kb on + strand at 284.376 kb on + strand at 284.381 kb on + strand at 284.381 kb on + strand at 284.383 kb on + strand at 284.383 kb on + strand at 284.384 kb on - strand at 284.397 kb on + strand at 284.426 kb on + strand at 284.428 kb on + strand at 284.434 kb on + strand at 284.434 kb on - strand at 284.434 kb on - strand at 284.436 kb on - strand at 284.443 kb on - strand at 284.444 kb on - strand at 284.473 kb on - strand at 284.482 kb on + strand at 284.485 kb on - strand at 284.496 kb on + strand at 284.509 kb on + strand at 284.509 kb on + strand at 284.509 kb on + strand at 284.511 kb on + strand at 284.511 kb on + strand at 284.517 kb on - strand at 284.517 kb on - strand at 284.524 kb on + strand at 284.551 kb on + strand, within Dshi_0284 at 284.552 kb on + strand, within Dshi_0284 at 284.552 kb on - strand, within Dshi_0284 at 284.560 kb on - strand, within Dshi_0284 at 284.567 kb on + strand, within Dshi_0284 at 284.575 kb on - strand, within Dshi_0284 at 284.575 kb on - strand, within Dshi_0284 at 284.590 kb on - strand, within Dshi_0284 at 284.624 kb on + strand, within Dshi_0284 at 284.624 kb on - strand, within Dshi_0284 at 284.639 kb on + strand, within Dshi_0284 at 284.655 kb on - strand, within Dshi_0284 at 284.657 kb on - strand, within Dshi_0284 at 284.731 kb on - strand, within Dshi_0284
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 282,508 + Dshi_0281 0.38 -1.0 282,529 - Dshi_0281 0.42 -0.2 282,620 - Dshi_0281 0.60 -0.8 282,620 - Dshi_0281 0.60 +0.1 282,644 - Dshi_0281 0.65 -1.8 282,649 - Dshi_0281 0.66 +0.4 282,651 - Dshi_0281 0.67 -0.7 282,667 + Dshi_0281 0.70 -0.8 282,735 - Dshi_0281 0.84 -1.6 282,743 + Dshi_0281 0.85 -1.1 282,743 + Dshi_0281 0.85 +0.7 282,751 - Dshi_0281 0.87 -0.3 282,755 + Dshi_0281 0.88 -0.0 282,763 - Dshi_0281 0.89 -0.3 282,769 + +0.0 282,789 + +0.9 282,804 + -0.6 282,810 - -0.1 282,816 + -0.1 282,832 + +0.6 282,840 - -0.4 282,879 + +0.2 282,890 + -0.6 282,890 + +0.7 282,890 + -0.1 282,890 + +0.3 282,890 + -0.0 282,890 + -0.2 282,890 + -0.8 282,890 + -0.3 282,890 + -0.0 282,890 + -0.6 282,890 + -0.1 282,890 + -0.6 282,890 + -0.4 282,890 + -0.7 282,896 + -0.1 282,898 - -0.2 282,898 - -0.2 282,898 - -0.7 282,898 - -0.2 282,898 - +0.6 282,898 - +0.1 282,898 - +0.2 282,898 - +0.7 282,898 - +0.3 282,898 - +0.6 282,898 - -0.2 282,898 - -0.4 282,898 - +0.0 282,909 + +0.4 282,913 + -0.0 282,950 + -0.1 282,950 + -0.8 282,950 + -0.3 282,958 - -0.5 282,988 - +0.1 283,034 - +0.3 283,041 + +0.1 283,053 - +0.2 283,057 - +0.3 283,060 + +0.5 283,064 + +1.4 283,066 + +0.8 283,066 + -0.1 283,072 - +0.0 283,073 - -1.3 283,092 + -0.0 283,104 + +0.0 283,115 + +0.2 283,115 + +0.8 283,122 + +0.4 283,123 - -0.7 283,130 - +0.9 283,157 - +0.6 283,214 + +0.0 283,219 + +0.9 283,219 + -0.3 283,219 + +0.1 283,219 + +0.0 283,226 + -2.7 283,226 + +0.1 283,226 + -1.3 283,227 - +0.6 283,234 - -0.2 283,234 - -0.4 283,257 + -0.7 283,257 + +0.7 283,263 + +0.6 283,337 + -0.2 283,351 - +0.0 283,353 + -0.7 283,358 + +0.4 283,371 + -0.7 283,379 - -1.1 283,382 + +0.6 283,389 + -0.7 283,389 + +0.8 283,389 + +1.3 283,389 + +0.6 283,389 + -1.0 283,389 + +0.3 283,390 - -0.2 283,390 - +0.4 283,394 + -0.4 283,397 - -0.2 283,404 + +0.4 283,404 + +0.3 283,457 - +0.5 283,504 - Dshi_0282 0.12 -0.9 283,522 - Dshi_0282 0.19 -1.0 283,542 + Dshi_0282 0.27 -0.7 283,550 - Dshi_0282 0.30 -0.1 283,566 + Dshi_0282 0.36 +0.5 283,577 - Dshi_0282 0.40 +0.3 283,579 + Dshi_0282 0.40 +0.8 283,579 + Dshi_0282 0.40 +0.8 283,579 + Dshi_0282 0.40 +0.4 283,579 + Dshi_0282 0.40 -0.8 283,579 + Dshi_0282 0.40 -0.1 283,579 + Dshi_0282 0.40 -0.0 283,579 + Dshi_0282 0.40 -0.0 283,584 - Dshi_0282 0.42 +0.3 283,587 - Dshi_0282 0.43 -0.0 283,587 - Dshi_0282 0.43 +0.3 283,587 - Dshi_0282 0.43 +0.6 283,597 - Dshi_0282 0.47 +0.6 283,607 + Dshi_0282 0.51 -0.3 283,643 + Dshi_0282 0.64 +0.1 283,643 + Dshi_0282 0.64 -0.0 283,643 + Dshi_0282 0.64 -0.6 283,648 + Dshi_0282 0.66 -0.2 283,648 + Dshi_0282 0.66 -0.9 283,651 - Dshi_0282 0.67 -0.4 283,655 - Dshi_0282 0.69 +0.1 283,663 - Dshi_0282 0.72 +0.6 283,677 + Dshi_0282 0.77 +1.0 283,700 + Dshi_0282 0.86 +1.0 283,711 + -0.4 283,711 + -0.3 283,713 - -0.5 283,724 - -0.5 283,732 + +0.6 283,732 + -1.1 283,732 + -0.6 283,746 + -0.3 283,748 + -1.0 283,748 + -1.1 283,748 + +0.2 283,748 + -1.2 283,750 + +0.1 283,756 - -0.0 283,756 - -1.0 283,756 - +0.3 283,761 + -0.2 283,766 + -0.7 283,776 + -0.2 283,784 - -0.4 283,787 - +0.0 283,787 - -1.1 283,798 + +0.8 283,802 + +0.2 283,813 + -0.6 283,816 - -0.3 283,816 - -0.4 283,821 - +2.0 283,821 - +0.6 283,832 + -0.6 283,832 + -1.9 283,832 + -1.0 283,835 - +0.7 283,840 - -0.2 283,840 - -1.0 283,850 + Dshi_0283 0.11 +0.3 283,874 + Dshi_0283 0.18 -0.8 283,874 + Dshi_0283 0.18 +0.7 283,887 + Dshi_0283 0.23 -0.2 283,901 + Dshi_0283 0.27 +0.4 283,901 + Dshi_0283 0.27 +0.4 283,909 - Dshi_0283 0.30 -0.8 283,928 + Dshi_0283 0.36 -0.9 283,935 + Dshi_0283 0.39 +0.5 283,935 + Dshi_0283 0.39 +0.3 283,935 + Dshi_0283 0.39 +0.3 283,935 + Dshi_0283 0.39 +1.1 283,936 - Dshi_0283 0.39 +1.1 283,939 - Dshi_0283 0.40 -1.3 283,943 - Dshi_0283 0.41 +0.4 283,944 - Dshi_0283 0.42 +0.9 283,984 + Dshi_0283 0.55 -0.1 283,991 + Dshi_0283 0.57 -0.9 283,991 + Dshi_0283 0.57 +0.7 283,992 - Dshi_0283 0.57 +0.3 283,992 - Dshi_0283 0.57 -0.7 283,999 - Dshi_0283 0.60 +0.5 284,009 + Dshi_0283 0.63 -0.2 284,009 + Dshi_0283 0.63 +0.3 284,057 + Dshi_0283 0.79 -0.2 284,057 + Dshi_0283 0.79 +1.3 284,057 + Dshi_0283 0.79 +0.4 284,057 + Dshi_0283 0.79 +0.8 284,057 + Dshi_0283 0.79 -0.2 284,057 + Dshi_0283 0.79 +0.9 284,057 + Dshi_0283 0.79 +0.1 284,057 + Dshi_0283 0.79 -1.9 284,057 + Dshi_0283 0.79 -0.1 284,057 + Dshi_0283 0.79 -0.8 284,057 + Dshi_0283 0.79 -0.9 284,057 + Dshi_0283 0.79 -0.7 284,065 - Dshi_0283 0.82 +0.7 284,065 - Dshi_0283 0.82 +0.7 284,065 - Dshi_0283 0.82 -0.8 284,065 - Dshi_0283 0.82 -0.7 284,065 - Dshi_0283 0.82 -0.2 284,074 + Dshi_0283 0.84 +0.4 284,074 + Dshi_0283 0.84 -0.1 284,105 - -0.8 284,114 + -0.1 284,114 + +0.2 284,114 + -1.9 284,114 + +1.0 284,122 - -0.9 284,123 + -0.3 284,123 + -0.1 284,124 + -0.1 284,140 + -0.3 284,140 + +0.3 284,146 + -0.4 284,147 + +0.8 284,147 + -0.2 284,147 + -0.6 284,147 + -1.0 284,148 - +0.1 284,152 + -1.1 284,152 + -0.0 284,153 + -0.7 284,153 + +0.3 284,153 + -0.3 284,153 + -0.1 284,153 + +0.3 284,153 + +0.5 284,153 + -0.5 284,155 - -0.3 284,155 - +0.3 284,160 + +0.1 284,160 - +0.3 284,160 - -0.8 284,160 - +0.1 284,160 - +0.0 284,161 - +0.3 284,163 + -0.2 284,168 - +1.2 284,168 - +0.5 284,193 + -0.5 284,198 + -0.1 284,206 - +0.5 284,206 - -1.1 284,211 + +0.4 284,219 - -0.3 284,256 - -0.1 284,268 + -0.3 284,271 - -0.5 284,272 - -0.2 284,286 + -0.0 284,286 + +0.7 284,286 + -0.6 284,286 + -0.4 284,358 + -0.3 284,366 + +0.1 284,366 + -0.3 284,374 - +1.3 284,374 - -0.1 284,374 - -0.4 284,374 - -0.4 284,375 + -0.0 284,376 + +0.3 284,381 + -0.1 284,381 + +0.7 284,383 + +0.3 284,383 + +0.1 284,384 - +0.7 284,397 + -0.6 284,426 + +0.7 284,428 + +0.9 284,434 + +0.2 284,434 - -0.4 284,434 - +0.7 284,436 - -0.2 284,443 - -0.1 284,444 - -0.8 284,473 - +0.4 284,482 + +0.5 284,485 - -0.3 284,496 + -0.1 284,509 + +0.0 284,509 + +2.1 284,509 + -0.2 284,511 + +0.7 284,511 + -1.1 284,517 - +0.3 284,517 - +1.0 284,524 + +0.0 284,551 + Dshi_0284 0.14 -0.0 284,552 + Dshi_0284 0.14 -0.2 284,552 - Dshi_0284 0.14 +0.3 284,560 - Dshi_0284 0.15 +0.3 284,567 + Dshi_0284 0.16 +0.3 284,575 - Dshi_0284 0.17 +0.2 284,575 - Dshi_0284 0.17 +0.6 284,590 - Dshi_0284 0.20 -0.3 284,624 + Dshi_0284 0.25 -0.2 284,624 - Dshi_0284 0.25 +0.0 284,639 + Dshi_0284 0.27 +0.1 284,655 - Dshi_0284 0.29 -0.4 284,657 - Dshi_0284 0.30 -0.1 284,731 - Dshi_0284 0.41 -0.2
Or see this region's nucleotide sequence