Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0117 and Dshi_0118 are separated by 46 nucleotides Dshi_0118 and Dshi_0119 are separated by 48 nucleotides Dshi_0119 and Dshi_0120 overlap by 4 nucleotides Dshi_0120 and Dshi_0121 overlap by 4 nucleotides
Dshi_0117: Dshi_0117 - methionine aminopeptidase, type I (RefSeq), at 116,582 to 117,397
_0117
Dshi_0118: Dshi_0118 - sugar fermentation stimulation protein (RefSeq), at 117,444 to 118,178
_0118
Dshi_0119: Dshi_0119 - molybdopterin binding domain (RefSeq), at 118,227 to 118,955
_0119
Dshi_0120: Dshi_0120 - GCN5-related N-acetyltransferase (RefSeq), at 118,952 to 119,677
_0120
Dshi_0121: Dshi_0121 - uncharacterized peroxidase-related enzyme (RefSeq), at 119,674 to 120,249
_0121
Position (kb)
118
119 Strain fitness (log2 ratio)
-1
0
1 at 117.368 kb on + strand at 117.508 kb on - strand at 117.609 kb on - strand, within Dshi_0118 at 117.615 kb on - strand, within Dshi_0118 at 117.617 kb on - strand, within Dshi_0118 at 117.721 kb on - strand, within Dshi_0118 at 117.736 kb on + strand, within Dshi_0118 at 117.744 kb on - strand, within Dshi_0118 at 117.776 kb on + strand, within Dshi_0118 at 117.867 kb on - strand, within Dshi_0118 at 117.952 kb on + strand, within Dshi_0118 at 117.956 kb on - strand, within Dshi_0118 at 118.096 kb on - strand, within Dshi_0118 at 118.101 kb on + strand, within Dshi_0118 at 118.109 kb on - strand at 118.109 kb on - strand at 118.180 kb on + strand at 118.185 kb on + strand at 118.187 kb on + strand at 118.193 kb on - strand at 118.195 kb on - strand at 118.216 kb on - strand at 118.216 kb on - strand at 118.216 kb on - strand at 118.217 kb on + strand at 118.225 kb on - strand at 118.289 kb on + strand at 118.378 kb on - strand, within Dshi_0119 at 118.589 kb on + strand, within Dshi_0119 at 118.611 kb on - strand, within Dshi_0119 at 118.642 kb on + strand, within Dshi_0119 at 118.753 kb on - strand, within Dshi_0119 at 118.755 kb on - strand, within Dshi_0119 at 119.007 kb on + strand at 119.016 kb on + strand at 119.041 kb on - strand, within Dshi_0120 at 119.121 kb on - strand, within Dshi_0120 at 119.272 kb on - strand, within Dshi_0120 at 119.314 kb on + strand, within Dshi_0120 at 119.395 kb on - strand, within Dshi_0120 at 119.397 kb on + strand, within Dshi_0120 at 119.483 kb on - strand, within Dshi_0120 at 119.625 kb on + strand at 119.692 kb on - strand at 119.772 kb on + strand, within Dshi_0121 at 119.842 kb on + strand, within Dshi_0121
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 117,368 + -0.2 117,508 - +0.7 117,609 - Dshi_0118 0.22 -0.1 117,615 - Dshi_0118 0.23 -0.3 117,617 - Dshi_0118 0.24 +1.4 117,721 - Dshi_0118 0.38 +0.0 117,736 + Dshi_0118 0.40 -0.3 117,744 - Dshi_0118 0.41 +1.7 117,776 + Dshi_0118 0.45 +0.2 117,867 - Dshi_0118 0.58 +0.1 117,952 + Dshi_0118 0.69 -0.1 117,956 - Dshi_0118 0.70 +0.4 118,096 - Dshi_0118 0.89 -1.0 118,101 + Dshi_0118 0.89 +0.3 118,109 - +0.3 118,109 - -0.1 118,180 + -0.8 118,185 + -0.8 118,187 + +1.5 118,193 - -0.2 118,195 - -0.1 118,216 - -0.2 118,216 - +0.6 118,216 - -0.8 118,217 + -0.3 118,225 - +0.6 118,289 + -1.1 118,378 - Dshi_0119 0.21 -0.8 118,589 + Dshi_0119 0.50 +0.0 118,611 - Dshi_0119 0.53 -0.0 118,642 + Dshi_0119 0.57 -0.2 118,753 - Dshi_0119 0.72 -0.5 118,755 - Dshi_0119 0.72 -0.3 119,007 + -0.0 119,016 + -1.3 119,041 - Dshi_0120 0.12 +0.0 119,121 - Dshi_0120 0.23 -1.1 119,272 - Dshi_0120 0.44 +0.8 119,314 + Dshi_0120 0.50 +0.5 119,395 - Dshi_0120 0.61 -0.2 119,397 + Dshi_0120 0.61 -0.0 119,483 - Dshi_0120 0.73 +0.7 119,625 + -0.2 119,692 - +0.7 119,772 + Dshi_0121 0.17 -0.5 119,842 + Dshi_0121 0.29 -0.2
Or see this region's nucleotide sequence