Experiment: MoYLS4 with 2,2' Dipyridyl 75uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0878 and DORF7930 are separated by 102 nucleotides DORF7930 and DVU0880 are separated by 13 nucleotides DVU0880 and fusA are separated by 494 nucleotides
DVU0878: DVU0878 - dnaK suppressor protein, putative (TIGR), at 970,085 to 970,441
DVU0878
DORF7930: DORF7930 - no description, at 970,544 to 970,678
DORF7930
DVU0880: DVU0880 - hypothetical protein (TIGR), at 970,692 to 970,976
DVU0880
DVU0881: fusA - translation elongation factor G, putative (TIGR), at 971,471 to 973,537
fusA
Position (kb) 970
971 Strain fitness (log2 ratio) -2
-1
0
1 at 969.771 kb on - strand at 969.856 kb on + strand at 969.918 kb on + strand at 969.936 kb on + strand at 969.995 kb on + strand at 970.001 kb on + strand at 970.128 kb on + strand, within DVU0878 at 970.162 kb on + strand, within DVU0878 at 970.189 kb on + strand, within DVU0878 at 970.207 kb on - strand, within DVU0878 at 970.223 kb on + strand, within DVU0878 at 970.223 kb on + strand, within DVU0878 at 970.223 kb on + strand, within DVU0878 at 970.231 kb on - strand, within DVU0878 at 970.234 kb on + strand, within DVU0878 at 970.254 kb on + strand, within DVU0878 at 970.254 kb on + strand, within DVU0878 at 970.254 kb on + strand, within DVU0878 at 970.254 kb on + strand, within DVU0878 at 970.262 kb on - strand, within DVU0878 at 970.262 kb on - strand, within DVU0878 at 970.262 kb on - strand, within DVU0878 at 970.262 kb on - strand, within DVU0878 at 970.290 kb on + strand, within DVU0878 at 970.308 kb on - strand, within DVU0878 at 970.387 kb on + strand, within DVU0878 at 970.410 kb on - strand at 970.412 kb on + strand at 970.422 kb on - strand at 970.450 kb on - strand at 970.538 kb on + strand at 970.541 kb on - strand at 970.601 kb on - strand, within DORF7930 at 970.608 kb on - strand, within DORF7930 at 970.753 kb on + strand, within DVU0880 at 970.829 kb on + strand, within DVU0880 at 970.860 kb on + strand, within DVU0880 at 970.890 kb on - strand, within DVU0880 at 970.890 kb on - strand, within DVU0880 at 970.900 kb on - strand, within DVU0880 at 970.938 kb on - strand, within DVU0880 at 970.975 kb on + strand at 971.123 kb on + strand at 971.128 kb on - strand at 971.133 kb on - strand at 971.269 kb on + strand at 971.269 kb on + strand at 971.335 kb on + strand at 971.343 kb on - strand at 971.349 kb on + strand at 971.417 kb on + strand at 971.454 kb on + strand at 971.462 kb on - strand at 971.497 kb on + strand at 971.510 kb on - strand at 971.554 kb on - strand at 971.593 kb on + strand at 971.601 kb on - strand at 971.837 kb on + strand, within fusA at 971.847 kb on - strand, within fusA at 971.847 kb on - strand, within fusA at 971.897 kb on - strand, within fusA at 971.910 kb on - strand, within fusA at 971.934 kb on + strand, within fusA at 971.950 kb on + strand, within fusA at 971.973 kb on - strand, within fusA
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with 2,2' Dipyridyl 75uM remove 969,771 - -0.3 969,856 + -2.5 969,918 + -0.0 969,936 + -0.1 969,995 + -0.3 970,001 + +0.0 970,128 + DVU0878 0.12 -1.1 970,162 + DVU0878 0.22 +0.0 970,189 + DVU0878 0.29 +1.0 970,207 - DVU0878 0.34 +0.6 970,223 + DVU0878 0.39 -0.1 970,223 + DVU0878 0.39 -0.1 970,223 + DVU0878 0.39 +0.2 970,231 - DVU0878 0.41 +0.2 970,234 + DVU0878 0.42 -0.2 970,254 + DVU0878 0.47 +0.4 970,254 + DVU0878 0.47 -0.5 970,254 + DVU0878 0.47 -0.2 970,254 + DVU0878 0.47 +0.6 970,262 - DVU0878 0.50 +0.1 970,262 - DVU0878 0.50 -1.6 970,262 - DVU0878 0.50 -1.0 970,262 - DVU0878 0.50 -0.3 970,290 + DVU0878 0.57 -1.4 970,308 - DVU0878 0.62 -1.2 970,387 + DVU0878 0.85 -0.1 970,410 - -0.8 970,412 + -0.1 970,422 - -0.2 970,450 - -0.6 970,538 + -0.1 970,541 - -0.3 970,601 - DORF7930 0.42 -1.6 970,608 - DORF7930 0.47 -0.2 970,753 + DVU0880 0.21 +0.2 970,829 + DVU0880 0.48 -0.1 970,860 + DVU0880 0.59 +0.9 970,890 - DVU0880 0.69 +1.1 970,890 - DVU0880 0.69 +0.4 970,900 - DVU0880 0.73 +0.2 970,938 - DVU0880 0.86 -0.1 970,975 + -1.2 971,123 + +0.6 971,128 - -0.1 971,133 - +0.9 971,269 + -0.4 971,269 + -0.4 971,335 + -1.1 971,343 - -1.8 971,349 + -0.7 971,417 + -0.5 971,454 + +0.0 971,462 - +0.5 971,497 + -1.1 971,510 - -1.5 971,554 - +0.1 971,593 + +0.1 971,601 - +0.2 971,837 + fusA DVU0881 0.18 +0.4 971,847 - fusA DVU0881 0.18 -0.1 971,847 - fusA DVU0881 0.18 +0.0 971,897 - fusA DVU0881 0.21 +0.0 971,910 - fusA DVU0881 0.21 +0.0 971,934 + fusA DVU0881 0.22 +0.4 971,950 + fusA DVU0881 0.23 +0.2 971,973 - fusA DVU0881 0.24 -0.0
Or see this region's nucleotide sequence