Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06555

Experiment: Growth at pH6 and (C) D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth at pH6 and (C) D-Glucose
1,465,607	+		PFLU_RS06550	0.34	-0.4
1,465,607	+		PFLU_RS06550	0.34	-1.5
1,465,607	+		PFLU_RS06550	0.34	-1.5
1,465,608	-		PFLU_RS06550	0.34	-2.4
1,465,680	-		PFLU_RS06550	0.41	-2.5
1,465,694	+		PFLU_RS06550	0.42	+1.9
1,465,694	+		PFLU_RS06550	0.42	-2.5
1,465,694	+		PFLU_RS06550	0.42	+0.2
1,465,694	+		PFLU_RS06550	0.42	-0.1
1,465,694	+		PFLU_RS06550	0.42	-1.1
1,465,694	+		PFLU_RS06550	0.42	-0.5
1,465,694	+		PFLU_RS06550	0.42	-3.1
1,465,694	+		PFLU_RS06550	0.42	-0.0
1,465,695	-		PFLU_RS06550	0.42	+0.8
1,465,695	-		PFLU_RS06550	0.42	-1.3
1,465,695	-		PFLU_RS06550	0.42	-0.1
1,465,695	-		PFLU_RS06550	0.42	-0.9
1,465,695	-		PFLU_RS06550	0.42	-0.4
1,465,820	+		PFLU_RS06550	0.53	-0.1
1,465,834	+		PFLU_RS06550	0.54	-0.1
1,465,834	+		PFLU_RS06550	0.54	+0.5
1,465,834	+		PFLU_RS06550	0.54	-0.8
1,465,834	+		PFLU_RS06550	0.54	+0.6
1,465,835	-		PFLU_RS06550	0.54	-3.2
1,465,835	-		PFLU_RS06550	0.54	+0.6
1,465,835	-		PFLU_RS06550	0.54	+0.5
1,465,835	-		PFLU_RS06550	0.54	-2.7
1,465,835	-		PFLU_RS06550	0.54	-0.9
1,465,835	-		PFLU_RS06550	0.54	-1.0
1,465,836	+		PFLU_RS06550	0.54	-1.4
1,465,836	+		PFLU_RS06550	0.54	+2.2
1,465,836	+		PFLU_RS06550	0.54	-0.9
1,465,836	+		PFLU_RS06550	0.54	+0.6
1,465,836	+		PFLU_RS06550	0.54	+1.3
1,465,836	+		PFLU_RS06550	0.54	+1.6
1,465,836	+		PFLU_RS06550	0.54	+0.6
1,465,836	+		PFLU_RS06550	0.54	-0.4
1,465,836	+		PFLU_RS06550	0.54	+0.2
1,465,836	+		PFLU_RS06550	0.54	-0.9
1,465,836	+		PFLU_RS06550	0.54	-0.5
1,465,836	+		PFLU_RS06550	0.54	-0.0
1,465,836	+		PFLU_RS06550	0.54	+0.0
1,465,836	+		PFLU_RS06550	0.54	-0.4
1,465,836	+		PFLU_RS06550	0.54	+1.9
1,465,836	+		PFLU_RS06550	0.54	+1.7
1,465,836	+		PFLU_RS06550	0.54	-0.3
1,465,836	+		PFLU_RS06550	0.54	-1.1
1,465,836	+		PFLU_RS06550	0.54	-1.1
1,465,836	+		PFLU_RS06550	0.54	+1.5
1,465,837	-		PFLU_RS06550	0.54	+0.9
1,465,837	-		PFLU_RS06550	0.54	-1.5
1,465,837	-		PFLU_RS06550	0.54	-0.8
1,465,837	-		PFLU_RS06550	0.54	+0.5
1,465,837	-		PFLU_RS06550	0.54	-0.7
1,465,837	-		PFLU_RS06550	0.54	+0.6
1,465,837	-		PFLU_RS06550	0.54	+0.1
1,465,837	-		PFLU_RS06550	0.54	-0.1
1,465,837	-		PFLU_RS06550	0.54	+0.6
1,465,837	-		PFLU_RS06550	0.54	-0.4
1,465,846	+		PFLU_RS06550	0.55	+1.0
1,465,846	+		PFLU_RS06550	0.55	+0.7
1,465,846	+		PFLU_RS06550	0.55	-2.3
1,465,847	-		PFLU_RS06550	0.55	+0.9
1,465,881	+		PFLU_RS06550	0.58	-1.7
1,465,882	-		PFLU_RS06550	0.58	+0.8
1,465,882	-		PFLU_RS06550	0.58	-0.4
1,465,890	+		PFLU_RS06550	0.59	-1.1
1,465,890	+		PFLU_RS06550	0.59	+0.6
1,465,890	+		PFLU_RS06550	0.59	+0.9
1,465,890	+		PFLU_RS06550	0.59	+0.2
1,465,890	+		PFLU_RS06550	0.59	-0.1
1,465,890	+		PFLU_RS06550	0.59	+1.4
1,465,891	-		PFLU_RS06550	0.59	+0.1
1,465,891	-		PFLU_RS06550	0.59	-0.4
1,465,891	-		PFLU_RS06550	0.59	-2.1
1,465,891	-		PFLU_RS06550	0.59	+0.1
1,465,891	-		PFLU_RS06550	0.59	+0.9
1,465,891	-		PFLU_RS06550	0.59	-1.1
1,465,891	-		PFLU_RS06550	0.59	-2.1
1,465,891	-		PFLU_RS06550	0.59	-0.6
1,465,891	-		PFLU_RS06550	0.59	-0.7
1,465,945	+		PFLU_RS06550	0.64	+1.2
1,465,946	-		PFLU_RS06550	0.64	+2.3
1,465,960	+		PFLU_RS06550	0.65	-0.7
1,465,960	+		PFLU_RS06550	0.65	+0.8
1,465,960	+		PFLU_RS06550	0.65	+1.2
1,465,960	+		PFLU_RS06550	0.65	-2.0
1,465,961	-		PFLU_RS06550	0.65	-0.3
1,465,961	-		PFLU_RS06550	0.65	-0.1
1,465,963	+		PFLU_RS06550	0.65	+0.5
1,465,963	+		PFLU_RS06550	0.65	+1.1
1,465,964	-		PFLU_RS06550	0.65	-0.8
1,465,964	-		PFLU_RS06550	0.65	-1.1
1,465,964	-		PFLU_RS06550	0.65	-1.4
1,466,036	+		PFLU_RS06550	0.72	-0.9
1,466,037	-		PFLU_RS06550	0.72	+0.8
1,466,037	-		PFLU_RS06550	0.72	-1.7
1,466,056	+		PFLU_RS06550	0.73	+0.5
1,466,056	+		PFLU_RS06550	0.73	-0.2
1,466,057	-		PFLU_RS06550	0.74	+1.9
1,466,057	-		PFLU_RS06550	0.74	+0.5
1,466,104	+		PFLU_RS06550	0.78	+1.0
1,466,116	+		PFLU_RS06550	0.79	+0.1
1,466,116	+		PFLU_RS06550	0.79	+0.5
1,466,124	+		PFLU_RS06550	0.79	+0.5
1,466,265	+				-0.5
1,466,265	+				+0.6
1,466,265	+				+0.2
1,466,265	+				-2.0
1,466,265	+				-0.1
1,466,265	+				-0.5
1,466,265	+				+1.7
1,466,265	+				-0.7
1,466,265	+				+0.2
1,466,265	+				+0.7
1,466,265	+				-0.4
1,466,265	+				-2.4
1,466,266	-				+0.6
1,466,266	-				+0.2
1,466,266	-				-0.1
1,466,266	-				+0.7
1,466,266	-				-2.1
1,466,266	-				-0.4
1,466,266	-				+0.5
1,466,266	-				-0.5
1,466,266	-				+0.3
1,466,266	-				+0.2
1,466,266	-				+2.2
1,466,266	-				-1.7
1,466,284	+				+0.1
1,466,284	+				+0.2
1,466,284	+				+0.5
1,466,284	+				-0.7
1,466,284	+				+1.0
1,466,285	-				-0.4
1,466,285	-				-1.6
1,466,285	-				-0.4
1,466,287	+				+0.3
1,466,287	+				+0.8
1,466,287	+				-0.2
1,466,287	+				-0.2
1,466,287	+				+0.6
1,466,287	+				-0.9
1,466,287	+				+0.9
1,466,287	+				+0.7
1,466,287	+				-0.7
1,466,287	+				-0.3
1,466,287	+				-0.7
1,466,287	+				+0.5
1,466,288	-				-2.1
1,466,288	-				-1.2
1,466,288	-				-2.6
1,466,288	-				-0.3
1,466,288	-				-1.5
1,466,288	-				-0.7
1,466,288	-				-1.4
1,466,288	-				-2.4
1,466,288	-				+0.4
1,466,288	-				+0.3
1,466,288	-				-0.5
1,466,288	-				-0.4
1,466,288	-				-0.5
1,466,300	+				+0.7
1,466,300	+				-0.6
1,466,300	+				+0.2
1,466,300	+				-2.4
1,466,300	+				+0.1
1,466,300	+				-0.3
1,466,300	+				+0.1
1,466,301	-				+1.0
1,466,301	-				+0.0
1,466,301	-				-1.1
1,466,301	-				-0.5
1,466,301	-				+0.0
1,466,301	-				-2.0
1,466,304	+				+0.3
1,466,304	+				+2.5
1,466,304	+				+1.5
1,466,304	+				+0.3
1,466,304	+				-0.8
1,466,304	+				+0.2
1,466,304	+				-0.3
1,466,304	+				-0.3
1,466,304	+				+1.2
1,466,304	+				-0.7
1,466,304	+				+0.5
1,466,304	+				+0.2
1,466,304	+				+1.5
1,466,304	+				+0.6
1,466,304	+				+0.6
1,466,304	+				+0.4
1,466,304	+				-0.8
1,466,304	+				+1.6
1,466,304	+				+0.5
1,466,304	+				+0.6
1,466,304	+				+0.5
1,466,305	-				+0.8
1,466,305	-				-0.7
1,466,305	-				+1.5
1,466,305	-				+0.5
1,466,305	-				+0.4
1,466,305	-				+0.6
1,466,305	-				+0.9
1,466,305	-				+0.0
1,466,305	-				+0.5
1,466,305	-				-1.1
1,466,305	-				+0.5
1,466,305	-				-0.9
1,466,305	-				+1.3
1,466,305	-				-0.5
1,466,305	-				-0.1
1,466,308	+				+0.5
1,466,308	+				-0.1
1,466,308	+				+0.6
1,466,308	+				+1.9
1,466,308	+				+0.1
1,466,309	-				+0.8
1,466,309	-				-2.0
1,466,309	-				+0.8
1,466,309	-				-0.3
1,466,309	-				+1.7
1,466,309	-				-0.1
1,466,309	-				+1.0
1,466,340	+				+0.9
1,466,357	+				-0.3
1,466,357	+				+0.0
1,466,399	+				+0.1
1,466,399	+				+0.5
1,466,399	+				+1.3
1,466,399	+				-0.7
1,466,399	+				+0.1
1,466,400	-				-2.5
1,466,400	-				-0.6
1,466,400	-				-1.3
1,466,400	-				-1.1
1,466,400	-				+0.1
1,466,401	+				+1.6
1,466,401	+				+1.3
1,466,401	+				-0.1
1,466,401	+				+0.8
1,466,401	+				+2.5
1,466,401	+				+1.1
1,466,401	+				+1.2
1,466,401	+				-0.2
1,466,401	+				-1.8
1,466,401	+				-0.5
1,466,402	-				-0.5
1,466,402	-				+0.6
1,466,402	-				-1.5
1,466,402	-				-0.2
1,466,402	-				-1.4
1,466,402	-				-1.7
1,466,402	-				-0.1
1,466,402	-				-0.9
1,466,426	+				-0.6
1,466,426	+				+1.0
1,466,427	-				-2.9
1,466,432	+				-1.1
1,466,432	+				+0.6
1,466,432	+				+1.5
1,466,433	-				-1.2
1,466,442	+				-1.2
1,466,442	+				-0.2
1,466,443	-				-1.3
1,466,443	-				-0.1
1,466,443	-				-1.4
1,466,443	-				-2.5
1,466,455	-				-2.8
1,466,455	-				-2.6
1,466,497	+				-2.3
1,466,498	-				-0.9
1,466,535	-				-0.9
1,466,535	-				+2.9
1,466,544	+				-2.2
1,466,544	+				-1.5
1,466,544	+				-0.4
1,466,613	+				-1.7
1,466,613	+				-0.8
1,466,631	+		PFLU_RS06555	0.11	-2.5
1,466,631	+		PFLU_RS06555	0.11	-2.0
1,466,631	+		PFLU_RS06555	0.11	-1.7
1,466,631	+		PFLU_RS06555	0.11	+0.5
1,466,631	+		PFLU_RS06555	0.11	+1.2
1,466,631	+		PFLU_RS06555	0.11	-0.5
1,466,631	+		PFLU_RS06555	0.11	-2.4
1,466,631	+		PFLU_RS06555	0.11	-0.9
1,466,631	+		PFLU_RS06555	0.11	+1.5
1,466,699	+		PFLU_RS06555	0.17	-1.2
1,466,699	+		PFLU_RS06555	0.17	-2.7
1,466,992	+		PFLU_RS06555	0.43	-2.2
1,466,992	+		PFLU_RS06555	0.43	-0.5
1,466,992	+		PFLU_RS06555	0.43	-1.1
1,466,993	-		PFLU_RS06555	0.43	+0.5
1,466,993	-		PFLU_RS06555	0.43	-0.9
1,466,993	-		PFLU_RS06555	0.43	-2.5
1,466,993	-		PFLU_RS06555	0.43	-1.5
1,466,993	-		PFLU_RS06555	0.43	-1.1
1,467,088	+		PFLU_RS06555	0.51	-3.2
1,467,088	+		PFLU_RS06555	0.51	+1.0
1,467,088	+		PFLU_RS06555	0.51	-0.7
1,467,088	+		PFLU_RS06555	0.51	-1.5
1,467,088	+		PFLU_RS06555	0.51	+0.9
1,467,089	-		PFLU_RS06555	0.51	-1.1
1,467,089	-		PFLU_RS06555	0.51	-2.5
1,467,089	-		PFLU_RS06555	0.51	-0.5
1,467,089	-		PFLU_RS06555	0.51	-0.9
1,467,089	-		PFLU_RS06555	0.51	-2.2
1,467,089	-		PFLU_RS06555	0.51	-0.7
1,467,089	-		PFLU_RS06555	0.51	+0.2
1,467,089	-		PFLU_RS06555	0.51	+1.7
1,467,089	-		PFLU_RS06555	0.51	-1.1
1,467,089	-		PFLU_RS06555	0.51	-0.1
1,467,089	-		PFLU_RS06555	0.51	-0.5
1,467,089	-		PFLU_RS06555	0.51	-3.2
1,467,089	-		PFLU_RS06555	0.51	-2.0
1,467,089	-		PFLU_RS06555	0.51	-0.1
1,467,188	+		PFLU_RS06555	0.60	-1.4
1,467,188	+		PFLU_RS06555	0.60	-2.3
1,467,188	+		PFLU_RS06555	0.60	-1.8
1,467,189	-		PFLU_RS06555	0.60	-1.7
1,467,379	-		PFLU_RS06555	0.76	-2.9
1,467,430	+		PFLU_RS06555	0.81	-0.3
1,467,430	+		PFLU_RS06555	0.81	-0.9
1,467,430	+		PFLU_RS06555	0.81	-2.0
1,467,430	+		PFLU_RS06555	0.81	-1.6
1,467,430	+		PFLU_RS06555	0.81	-2.5
1,467,430	+		PFLU_RS06555	0.81	-0.8
1,467,430	+		PFLU_RS06555	0.81	-2.8
1,467,430	+		PFLU_RS06555	0.81	-3.0
1,467,430	+		PFLU_RS06555	0.81	-3.6
1,467,431	-		PFLU_RS06555	0.81	+0.1
1,467,431	-		PFLU_RS06555	0.81	-1.6
1,467,431	-		PFLU_RS06555	0.81	+0.1
1,467,431	-		PFLU_RS06555	0.81	-2.2
1,467,431	-		PFLU_RS06555	0.81	-0.1
1,467,431	-		PFLU_RS06555	0.81	-2.4
1,467,431	-		PFLU_RS06555	0.81	-1.7
1,467,431	-		PFLU_RS06555	0.81	-0.8
1,467,431	-		PFLU_RS06555	0.81	+0.2
1,467,431	-		PFLU_RS06555	0.81	+1.7
1,467,431	-		PFLU_RS06555	0.81	-2.0
1,467,431	-		PFLU_RS06555	0.81	-0.7
1,467,431	-		PFLU_RS06555	0.81	-1.5
1,467,431	-		PFLU_RS06555	0.81	+0.1
1,468,397	+		PFLU_RS06565	0.14	-2.5
1,468,397	+		PFLU_RS06565	0.14	-1.1
1,468,397	+		PFLU_RS06565	0.14	-0.5
1,468,397	+		PFLU_RS06565	0.14	+1.0
1,468,397	+		PFLU_RS06565	0.14	+1.5
1,468,397	+		PFLU_RS06565	0.14	-0.8
1,468,397	+		PFLU_RS06565	0.14	+0.7
1,468,398	-		PFLU_RS06565	0.15	-0.5
1,468,398	-		PFLU_RS06565	0.15	-1.0
1,468,398	-		PFLU_RS06565	0.15	+0.1
1,468,398	-		PFLU_RS06565	0.15	+0.5
1,468,398	-		PFLU_RS06565	0.15	+1.3
1,468,398	-		PFLU_RS06565	0.15	-0.2
1,468,398	-		PFLU_RS06565	0.15	-1.0
1,468,398	-		PFLU_RS06565	0.15	-1.8
1,468,398	-		PFLU_RS06565	0.15	-0.5
1,468,398	-		PFLU_RS06565	0.15	-0.6
1,468,398	-		PFLU_RS06565	0.15	-1.2
1,468,398	-		PFLU_RS06565	0.15	-2.0
1,468,398	-		PFLU_RS06565	0.15	-0.3
1,468,498	+		PFLU_RS06565	0.53	-0.5
1,468,498	+		PFLU_RS06565	0.53	+0.5
1,468,498	+		PFLU_RS06565	0.53	+1.0
1,468,498	+		PFLU_RS06565	0.53	-0.3
1,468,498	+		PFLU_RS06565	0.53	+1.6
1,468,498	+		PFLU_RS06565	0.53	+0.1
1,468,498	+		PFLU_RS06565	0.53	+0.9
1,468,498	+		PFLU_RS06565	0.53	+1.0
1,468,498	+		PFLU_RS06565	0.53	-0.1
1,468,498	+		PFLU_RS06565	0.53	+1.0
1,468,499	-		PFLU_RS06565	0.53	+0.6
1,468,499	-		PFLU_RS06565	0.53	+0.6
1,468,499	-		PFLU_RS06565	0.53	+0.3
1,468,499	-		PFLU_RS06565	0.53	+0.9
1,468,499	-		PFLU_RS06565	0.53	+0.0
1,468,499	-		PFLU_RS06565	0.53	-1.3
1,468,499	-		PFLU_RS06565	0.53	-0.1
1,468,499	-		PFLU_RS06565	0.53	-0.1
1,468,499	-		PFLU_RS06565	0.53	-2.5
1,468,499	-		PFLU_RS06565	0.53	-1.7
1,468,499	-		PFLU_RS06565	0.53	-0.9
1,468,499	-		PFLU_RS06565	0.53	-1.0
1,468,559	+		PFLU_RS06565	0.76	+0.4
1,468,559	+		PFLU_RS06565	0.76	+0.8
1,468,560	-		PFLU_RS06565	0.77	-0.0
1,468,560	-		PFLU_RS06565	0.77	+0.5
1,468,578	-		PFLU_RS06565	0.84	-1.1
1,468,578	-		PFLU_RS06565	0.84	-1.4
1,468,578	-		PFLU_RS06565	0.84	+0.3
1,468,600	+				-0.5
1,468,600	+				+1.0
1,468,600	+				-2.5
1,468,600	+				-0.1
1,468,600	+				+0.7
1,468,600	+				+0.7
1,468,600	+				-2.0
1,468,600	+				+0.9
1,468,601	-				-0.7
1,468,601	-				+3.0
1,468,601	-				+3.2
1,468,601	-				-0.1
1,468,601	-				-0.4
1,468,613	+				-0.4
1,468,613	+				+1.7
1,468,613	+				-0.6
1,468,613	+				-0.5
1,468,613	+				+0.1
1,468,614	-				-1.2
1,468,614	-				-1.5
1,468,614	-				+2.7
1,468,614	-				-0.1
1,468,634	-				+1.5