Experiment: syringaldehyde 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_18525 and AO356_18530 are separated by 937 nucleotides AO356_18530 and AO356_18535 are separated by 164 nucleotides AO356_18535 and AO356_18540 overlap by 4 nucleotides
AO356_18525: AO356_18525 - mercuric reductase, at 4,167,863 to 4,168,000
_18525
AO356_18530: AO356_18530 - L-tyrosine transporter <small>(from data)</small>, at 4,168,938 to 4,170,353
_18530
AO356_18535: AO356_18535 - class I peptide chain release factor, at 4,170,518 to 4,170,931
_18535
AO356_18540: AO356_18540 - MFS transporter, at 4,170,928 to 4,172,127
_18540
Position (kb) 4168
4169
4170
4171 Strain fitness (log2 ratio) -1
0
1
2 at 4168.000 kb on + strand at 4168.000 kb on + strand at 4168.000 kb on + strand at 4168.001 kb on - strand at 4168.012 kb on + strand at 4168.012 kb on + strand at 4168.013 kb on - strand at 4168.023 kb on + strand at 4168.023 kb on + strand at 4168.023 kb on + strand at 4168.120 kb on - strand at 4168.199 kb on + strand at 4168.199 kb on + strand at 4168.199 kb on + strand at 4168.200 kb on - strand at 4168.241 kb on + strand at 4168.241 kb on + strand at 4168.241 kb on + strand at 4168.241 kb on + strand at 4168.241 kb on + strand at 4168.241 kb on + strand at 4168.241 kb on + strand at 4168.241 kb on + strand at 4168.242 kb on - strand at 4168.246 kb on - strand at 4168.246 kb on - strand at 4168.246 kb on - strand at 4168.249 kb on + strand at 4168.372 kb on + strand at 4168.546 kb on + strand at 4168.547 kb on - strand at 4168.553 kb on - strand at 4168.553 kb on - strand at 4168.553 kb on - strand at 4168.683 kb on + strand at 4168.684 kb on - strand at 4168.684 kb on - strand at 4168.700 kb on + strand at 4168.796 kb on - strand at 4168.796 kb on - strand at 4168.796 kb on - strand at 4168.796 kb on - strand at 4168.796 kb on - strand at 4168.902 kb on - strand at 4169.193 kb on + strand, within AO356_18530 at 4169.194 kb on - strand, within AO356_18530 at 4169.194 kb on - strand, within AO356_18530 at 4169.194 kb on - strand, within AO356_18530 at 4169.244 kb on + strand, within AO356_18530 at 4169.244 kb on + strand, within AO356_18530 at 4169.244 kb on + strand, within AO356_18530 at 4169.244 kb on + strand, within AO356_18530 at 4169.245 kb on - strand, within AO356_18530 at 4169.245 kb on - strand, within AO356_18530 at 4169.245 kb on - strand, within AO356_18530 at 4169.245 kb on - strand, within AO356_18530 at 4169.245 kb on - strand, within AO356_18530 at 4169.245 kb on - strand, within AO356_18530 at 4169.286 kb on + strand, within AO356_18530 at 4169.286 kb on + strand, within AO356_18530 at 4169.286 kb on + strand, within AO356_18530 at 4169.286 kb on + strand, within AO356_18530 at 4169.286 kb on + strand, within AO356_18530 at 4169.286 kb on + strand, within AO356_18530 at 4169.286 kb on + strand, within AO356_18530 at 4169.286 kb on + strand, within AO356_18530 at 4169.286 kb on + strand, within AO356_18530 at 4169.286 kb on + strand, within AO356_18530 at 4169.286 kb on + strand, within AO356_18530 at 4169.287 kb on - strand, within AO356_18530 at 4169.287 kb on - strand, within AO356_18530 at 4169.287 kb on - strand, within AO356_18530 at 4169.287 kb on - strand, within AO356_18530 at 4169.287 kb on - strand, within AO356_18530 at 4169.454 kb on + strand, within AO356_18530 at 4169.454 kb on + strand, within AO356_18530 at 4169.454 kb on + strand, within AO356_18530 at 4169.454 kb on + strand, within AO356_18530 at 4169.455 kb on - strand, within AO356_18530 at 4169.455 kb on - strand, within AO356_18530 at 4169.455 kb on - strand, within AO356_18530 at 4169.455 kb on - strand, within AO356_18530 at 4169.455 kb on - strand, within AO356_18530 at 4169.682 kb on + strand, within AO356_18530 at 4169.682 kb on + strand, within AO356_18530 at 4169.682 kb on + strand, within AO356_18530 at 4169.683 kb on - strand, within AO356_18530 at 4169.763 kb on + strand, within AO356_18530 at 4169.764 kb on - strand, within AO356_18530 at 4169.822 kb on + strand, within AO356_18530 at 4169.823 kb on - strand, within AO356_18530 at 4169.862 kb on + strand, within AO356_18530 at 4169.862 kb on + strand, within AO356_18530 at 4169.863 kb on - strand, within AO356_18530 at 4169.863 kb on - strand, within AO356_18530 at 4169.863 kb on - strand, within AO356_18530 at 4169.863 kb on - strand, within AO356_18530 at 4169.877 kb on + strand, within AO356_18530 at 4169.877 kb on + strand, within AO356_18530 at 4169.877 kb on + strand, within AO356_18530 at 4169.878 kb on - strand, within AO356_18530 at 4169.878 kb on - strand, within AO356_18530 at 4169.878 kb on - strand, within AO356_18530 at 4169.878 kb on - strand, within AO356_18530 at 4169.966 kb on - strand, within AO356_18530 at 4170.018 kb on + strand, within AO356_18530 at 4170.018 kb on + strand, within AO356_18530 at 4170.018 kb on + strand, within AO356_18530 at 4170.018 kb on + strand, within AO356_18530 at 4170.018 kb on + strand, within AO356_18530 at 4170.099 kb on + strand, within AO356_18530 at 4170.099 kb on + strand, within AO356_18530 at 4170.100 kb on - strand, within AO356_18530 at 4170.100 kb on - strand, within AO356_18530 at 4170.100 kb on - strand, within AO356_18530 at 4170.183 kb on + strand, within AO356_18530 at 4170.183 kb on + strand, within AO356_18530 at 4170.183 kb on + strand, within AO356_18530 at 4170.183 kb on + strand, within AO356_18530 at 4170.183 kb on + strand, within AO356_18530 at 4170.183 kb on + strand, within AO356_18530 at 4170.184 kb on - strand, within AO356_18530 at 4170.184 kb on - strand, within AO356_18530 at 4170.184 kb on - strand, within AO356_18530 at 4170.184 kb on - strand, within AO356_18530 at 4170.184 kb on - strand, within AO356_18530 at 4170.184 kb on - strand, within AO356_18530 at 4170.294 kb on + strand at 4170.294 kb on + strand at 4170.294 kb on + strand at 4170.295 kb on - strand at 4170.295 kb on - strand at 4170.295 kb on - strand at 4170.351 kb on + strand at 4170.351 kb on + strand at 4170.351 kb on + strand at 4170.351 kb on + strand at 4170.352 kb on - strand at 4170.352 kb on - strand at 4170.352 kb on - strand at 4170.352 kb on - strand at 4170.352 kb on - strand at 4170.405 kb on + strand at 4170.405 kb on + strand at 4170.459 kb on + strand at 4170.460 kb on - strand at 4170.671 kb on + strand, within AO356_18535 at 4170.671 kb on + strand, within AO356_18535 at 4170.672 kb on - strand, within AO356_18535 at 4170.672 kb on - strand, within AO356_18535 at 4170.747 kb on - strand, within AO356_18535 at 4170.747 kb on - strand, within AO356_18535 at 4170.977 kb on + strand at 4170.978 kb on - strand at 4170.978 kb on - strand at 4170.978 kb on - strand at 4171.110 kb on - strand, within AO356_18540
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 10 mM remove 4,168,000 + -0.7 4,168,000 + +0.9 4,168,000 + -0.1 4,168,001 - -0.8 4,168,012 + +0.5 4,168,012 + +0.2 4,168,013 - -0.7 4,168,023 + +0.6 4,168,023 + -0.4 4,168,023 + +0.4 4,168,120 - +0.2 4,168,199 + +0.3 4,168,199 + +0.0 4,168,199 + +0.7 4,168,200 - -0.3 4,168,241 + +1.1 4,168,241 + +0.7 4,168,241 + -0.0 4,168,241 + +0.6 4,168,241 + +0.1 4,168,241 + +0.4 4,168,241 + +0.2 4,168,241 + +0.1 4,168,242 - +0.5 4,168,246 - -0.3 4,168,246 - -0.6 4,168,246 - +1.5 4,168,249 + -0.4 4,168,372 + +0.1 4,168,546 + -0.1 4,168,547 - +0.3 4,168,553 - -0.3 4,168,553 - +1.1 4,168,553 - +0.5 4,168,683 + +0.2 4,168,684 - +0.2 4,168,684 - +1.2 4,168,700 + +2.4 4,168,796 - -0.2 4,168,796 - -0.8 4,168,796 - +0.4 4,168,796 - +2.0 4,168,796 - -0.3 4,168,902 - +1.0 4,169,193 + AO356_18530 0.18 -1.2 4,169,194 - AO356_18530 0.18 +0.4 4,169,194 - AO356_18530 0.18 +0.4 4,169,194 - AO356_18530 0.18 -0.2 4,169,244 + AO356_18530 0.22 -0.2 4,169,244 + AO356_18530 0.22 -0.6 4,169,244 + AO356_18530 0.22 +0.4 4,169,244 + AO356_18530 0.22 +0.5 4,169,245 - AO356_18530 0.22 -0.3 4,169,245 - AO356_18530 0.22 -0.6 4,169,245 - AO356_18530 0.22 +0.3 4,169,245 - AO356_18530 0.22 -1.5 4,169,245 - AO356_18530 0.22 +1.3 4,169,245 - AO356_18530 0.22 +0.2 4,169,286 + AO356_18530 0.25 +0.2 4,169,286 + AO356_18530 0.25 +0.1 4,169,286 + AO356_18530 0.25 +0.1 4,169,286 + AO356_18530 0.25 +0.1 4,169,286 + AO356_18530 0.25 +0.7 4,169,286 + AO356_18530 0.25 +0.7 4,169,286 + AO356_18530 0.25 +0.5 4,169,286 + AO356_18530 0.25 +0.1 4,169,286 + AO356_18530 0.25 +0.1 4,169,286 + AO356_18530 0.25 +0.5 4,169,286 + AO356_18530 0.25 +0.4 4,169,287 - AO356_18530 0.25 -1.0 4,169,287 - AO356_18530 0.25 +0.8 4,169,287 - AO356_18530 0.25 -0.8 4,169,287 - AO356_18530 0.25 +0.6 4,169,287 - AO356_18530 0.25 -0.3 4,169,454 + AO356_18530 0.36 +0.2 4,169,454 + AO356_18530 0.36 -0.1 4,169,454 + AO356_18530 0.36 +0.6 4,169,454 + AO356_18530 0.36 +0.7 4,169,455 - AO356_18530 0.37 -0.2 4,169,455 - AO356_18530 0.37 +0.1 4,169,455 - AO356_18530 0.37 -0.3 4,169,455 - AO356_18530 0.37 +0.8 4,169,455 - AO356_18530 0.37 +0.5 4,169,682 + AO356_18530 0.53 -0.6 4,169,682 + AO356_18530 0.53 +0.2 4,169,682 + AO356_18530 0.53 +0.9 4,169,683 - AO356_18530 0.53 +0.6 4,169,763 + AO356_18530 0.58 +0.9 4,169,764 - AO356_18530 0.58 +0.4 4,169,822 + AO356_18530 0.62 -0.1 4,169,823 - AO356_18530 0.62 -1.1 4,169,862 + AO356_18530 0.65 -0.6 4,169,862 + AO356_18530 0.65 -0.5 4,169,863 - AO356_18530 0.65 +0.7 4,169,863 - AO356_18530 0.65 +0.6 4,169,863 - AO356_18530 0.65 +0.4 4,169,863 - AO356_18530 0.65 +0.5 4,169,877 + AO356_18530 0.66 +0.9 4,169,877 + AO356_18530 0.66 +0.2 4,169,877 + AO356_18530 0.66 +0.2 4,169,878 - AO356_18530 0.66 -0.1 4,169,878 - AO356_18530 0.66 +0.4 4,169,878 - AO356_18530 0.66 +0.8 4,169,878 - AO356_18530 0.66 -0.4 4,169,966 - AO356_18530 0.73 +0.9 4,170,018 + AO356_18530 0.76 -0.1 4,170,018 + AO356_18530 0.76 -0.5 4,170,018 + AO356_18530 0.76 -0.3 4,170,018 + AO356_18530 0.76 +0.4 4,170,018 + AO356_18530 0.76 +0.5 4,170,099 + AO356_18530 0.82 +0.6 4,170,099 + AO356_18530 0.82 -0.2 4,170,100 - AO356_18530 0.82 +0.3 4,170,100 - AO356_18530 0.82 +0.4 4,170,100 - AO356_18530 0.82 +0.0 4,170,183 + AO356_18530 0.88 -0.1 4,170,183 + AO356_18530 0.88 -0.8 4,170,183 + AO356_18530 0.88 -0.0 4,170,183 + AO356_18530 0.88 -0.6 4,170,183 + AO356_18530 0.88 +0.4 4,170,183 + AO356_18530 0.88 +0.2 4,170,184 - AO356_18530 0.88 -0.5 4,170,184 - AO356_18530 0.88 +0.7 4,170,184 - AO356_18530 0.88 +0.3 4,170,184 - AO356_18530 0.88 -0.2 4,170,184 - AO356_18530 0.88 +0.4 4,170,184 - AO356_18530 0.88 +1.5 4,170,294 + +0.5 4,170,294 + -0.2 4,170,294 + -0.1 4,170,295 - +0.7 4,170,295 - -0.5 4,170,295 - +1.9 4,170,351 + -0.5 4,170,351 + -0.1 4,170,351 + -0.4 4,170,351 + +0.6 4,170,352 - +1.0 4,170,352 - -0.2 4,170,352 - -0.2 4,170,352 - +0.7 4,170,352 - +0.1 4,170,405 + +0.7 4,170,405 + +0.8 4,170,459 + -0.6 4,170,460 - -0.0 4,170,671 + AO356_18535 0.37 -1.2 4,170,671 + AO356_18535 0.37 +1.1 4,170,672 - AO356_18535 0.37 +0.5 4,170,672 - AO356_18535 0.37 +1.3 4,170,747 - AO356_18535 0.55 +0.4 4,170,747 - AO356_18535 0.55 +0.1 4,170,977 + +0.7 4,170,978 - +0.4 4,170,978 - +0.2 4,170,978 - +0.6 4,171,110 - AO356_18540 0.15 -0.1
Or see this region's nucleotide sequence