Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS07695

Experiment: Iron excess (2.5x) , H2 media

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Iron excess (2.5x) , H2 media
1,410,183	-		MMJJ_RS07690	0.27	+1.7
1,410,184	+		MMJJ_RS07690	0.27	-0.1
1,410,184	+		MMJJ_RS07690	0.27	-0.9
1,410,185	-		MMJJ_RS07690	0.27	-1.0
1,410,209	+		MMJJ_RS07690	0.29	-0.4
1,410,209	+		MMJJ_RS07690	0.29	+0.3
1,410,228	-		MMJJ_RS07690	0.31	+0.8
1,410,320	-				+4.4
1,410,343	+		MMJJ_RS07690	0.41	-0.6
1,410,369	-		MMJJ_RS07690	0.43	+1.3
1,410,395	-		MMJJ_RS07690	0.45	-1.9
1,410,397	-		MMJJ_RS07690	0.45	+0.1
1,410,502	-		MMJJ_RS07690	0.54	-3.1
1,410,579	-		MMJJ_RS07690	0.61	+1.3
1,410,580	+		MMJJ_RS07690	0.61	+0.4
1,410,591	+		MMJJ_RS07690	0.62	+0.0
1,410,593	-		MMJJ_RS07690	0.62	+1.3
1,410,831	-		MMJJ_RS07690	0.82	+0.3
1,410,831	-		MMJJ_RS07690	0.82	+0.1
1,410,832	+		MMJJ_RS07690	0.82	+0.2
1,410,844	-		MMJJ_RS07690	0.83	-0.0
1,410,845	+		MMJJ_RS07690	0.83	+0.6
1,410,906	+		MMJJ_RS07690	0.88	-0.7
1,410,939	-				+0.5
1,410,962	+				+0.8
1,410,963	-				+0.7
1,410,970	-				+0.4
1,411,008	+				+2.0
1,411,008	+				-0.2
1,411,008	+				+3.0
1,411,009	-				-0.9
1,411,009	-				-0.2
1,411,009	-				-0.4
1,411,010	+				+0.2
1,411,010	+				+0.1
1,411,010	+				-1.2
1,411,011	-				+0.5
1,411,039	-				+1.4
1,411,044	-				+1.0
1,411,062	-				+0.6
1,411,065	-				-0.2
1,411,065	-				+1.5
1,411,066	+				+1.5
1,411,066	+				-0.7
1,411,067	-				-0.9
1,411,068	+				+0.1
1,411,068	+				-1.8
1,411,068	+				-0.0
1,411,068	+				+1.9
1,411,068	+				+0.2
1,411,072	+				-0.4
1,411,072	+				-1.2
1,411,074	-				-1.2
1,411,082	+				+1.3
1,411,095	+				-0.6
1,411,105	-				+1.0
1,411,108	-				+0.8
1,411,108	-				+1.2
1,411,109	+				+0.7
1,411,127	-				+0.0
1,411,128	+				+0.5
1,411,172	-				-1.2
1,411,186	-				+0.5
1,411,186	-				+1.9
1,411,186	-				+0.5
1,411,186	-				+0.4
1,411,187	+				+0.3
1,411,187	+				+1.5
1,411,209	-				+0.5
1,411,269	-				+0.5
1,411,323	-				-2.0
1,411,335	+		MMJJ_RS07695	0.10	+1.5
1,411,340	-		MMJJ_RS07695	0.10	+0.6
1,411,341	+		MMJJ_RS07695	0.10	+1.0
1,411,349	-		MMJJ_RS07695	0.11	+0.9
1,411,357	+		MMJJ_RS07695	0.11	+1.3
1,411,392	-		MMJJ_RS07695	0.13	-1.4
1,411,392	-		MMJJ_RS07695	0.13	+1.1
1,411,393	+		MMJJ_RS07695	0.13	+0.5
1,411,394	-		MMJJ_RS07695	0.13	+1.0
1,411,394	-		MMJJ_RS07695	0.13	+1.4
1,411,395	+		MMJJ_RS07695	0.13	-0.9
1,411,413	+		MMJJ_RS07695	0.14	+2.5
1,411,413	+		MMJJ_RS07695	0.14	+0.3
1,411,414	-		MMJJ_RS07695	0.14	+0.8
1,411,414	-		MMJJ_RS07695	0.14	-1.2
1,411,414	-		MMJJ_RS07695	0.14	-1.0
1,411,415	+		MMJJ_RS07695	0.14	+0.0
1,411,420	-		MMJJ_RS07695	0.15	+0.4
1,411,420	-		MMJJ_RS07695	0.15	+2.9
1,411,435	-		MMJJ_RS07695	0.15	+1.3
1,411,440	+		MMJJ_RS07695	0.16	-1.0
1,411,440	+		MMJJ_RS07695	0.16	+0.2
1,411,472	+		MMJJ_RS07695	0.17	+0.0
1,411,557	-		MMJJ_RS07695	0.22	-0.0
1,411,557	-		MMJJ_RS07695	0.22	+1.4
1,411,569	-		MMJJ_RS07695	0.23	+0.1
1,411,570	+		MMJJ_RS07695	0.23	+1.5
1,411,635	+		MMJJ_RS07695	0.26	+0.6
1,411,699	-		MMJJ_RS07695	0.30	-0.0
1,411,713	+		MMJJ_RS07695	0.30	+0.4
1,411,713	+		MMJJ_RS07695	0.30	+1.0
1,411,765	+		MMJJ_RS07695	0.33	-0.3
1,411,766	-		MMJJ_RS07695	0.33	+0.6
1,411,766	-		MMJJ_RS07695	0.33	+0.9
1,411,798	+		MMJJ_RS07695	0.35	+1.4
1,411,799	-		MMJJ_RS07695	0.35	-0.7
1,411,823	-		MMJJ_RS07695	0.36	+0.9
1,411,823	-		MMJJ_RS07695	0.36	+1.2
1,411,823	-		MMJJ_RS07695	0.36	+0.2
1,411,823	-		MMJJ_RS07695	0.36	+0.1
1,411,824	+		MMJJ_RS07695	0.36	-3.6
1,411,866	+		MMJJ_RS07695	0.39	+1.7
1,411,903	-		MMJJ_RS07695	0.41	+0.1
1,411,907	-		MMJJ_RS07695	0.41	+0.7
1,411,907	-		MMJJ_RS07695	0.41	-0.7
1,411,908	+		MMJJ_RS07695	0.41	+0.0
1,411,988	+		MMJJ_RS07695	0.45	+0.5
1,412,047	-		MMJJ_RS07695	0.48	-0.0
1,412,047	-		MMJJ_RS07695	0.48	+0.2
1,412,047	-		MMJJ_RS07695	0.48	+0.1
1,412,047	-		MMJJ_RS07695	0.48	-0.8
1,412,047	-		MMJJ_RS07695	0.48	-0.9
1,412,048	+		MMJJ_RS07695	0.48	+0.6
1,412,048	+		MMJJ_RS07695	0.48	+1.1
1,412,048	+		MMJJ_RS07695	0.48	+1.0
1,412,048	+		MMJJ_RS07695	0.48	-1.6
1,412,048	+		MMJJ_RS07695	0.48	+0.8
1,412,177	-		MMJJ_RS07695	0.55	+0.8
1,412,212	-		MMJJ_RS07695	0.57	+0.3
1,412,319	-		MMJJ_RS07695	0.63	+1.4
1,412,319	-		MMJJ_RS07695	0.63	+0.4
1,412,319	-		MMJJ_RS07695	0.63	+0.9
1,412,319	-		MMJJ_RS07695	0.63	+0.3
1,412,323	-		MMJJ_RS07695	0.63	+0.8
1,412,323	-		MMJJ_RS07695	0.63	+0.6
1,412,323	-		MMJJ_RS07695	0.63	+0.2
1,412,323	-		MMJJ_RS07695	0.63	+1.4
1,412,391	-		MMJJ_RS07695	0.67	+1.0
1,412,391	-		MMJJ_RS07695	0.67	-1.0
1,412,391	-		MMJJ_RS07695	0.67	+0.8
1,412,391	-		MMJJ_RS07695	0.67	+2.1
1,412,391	-		MMJJ_RS07695	0.67	+0.0
1,412,392	+		MMJJ_RS07695	0.67	+0.3
1,412,409	-		MMJJ_RS07695	0.68	-0.7
1,412,409	-		MMJJ_RS07695	0.68	+0.1
1,412,526	-		MMJJ_RS07695	0.74	+0.7
1,412,526	-		MMJJ_RS07695	0.74	+0.6
1,412,591	-		MMJJ_RS07695	0.77	-0.5
1,412,591	-		MMJJ_RS07695	0.77	+0.8
1,412,592	+		MMJJ_RS07695	0.77	+1.1
1,412,593	-		MMJJ_RS07695	0.78	+0.3
1,412,593	-		MMJJ_RS07695	0.78	+0.6
1,412,593	-		MMJJ_RS07695	0.78	-1.0
1,412,594	+		MMJJ_RS07695	0.78	+0.4
1,412,624	+		MMJJ_RS07695	0.79	+0.7
1,412,747	+		MMJJ_RS07695	0.86	-0.1
1,412,783	-		MMJJ_RS07695	0.88	+0.5
1,412,783	-		MMJJ_RS07695	0.88	-1.2
1,412,785	-		MMJJ_RS07695	0.88	+0.3
1,412,785	-		MMJJ_RS07695	0.88	-1.6
1,412,785	-		MMJJ_RS07695	0.88	+1.1
1,412,786	+		MMJJ_RS07695	0.88	+1.6
1,412,788	+		MMJJ_RS07695	0.88	+1.5
1,412,788	+		MMJJ_RS07695	0.88	+0.1
1,412,869	-				-1.7
1,412,873	-				+0.6
1,412,873	-				+1.0
1,412,873	-				+0.2
1,412,873	-				+0.5
1,412,874	+				+0.2
1,412,874	+				+0.3
1,412,874	+				+1.3
1,412,874	+				+1.8
1,412,878	+				+2.0
1,412,880	+				-0.1
1,412,969	-				+0.6
1,412,969	-				+1.5
1,412,970	+				+0.4
1,412,970	+				+1.9
1,412,970	+				-0.2
1,413,002	+				+0.8
1,413,010	+				-0.4
1,413,014	-				+1.1
1,413,021	-				+2.0
1,413,021	-				+0.9
1,413,021	-				+0.5
1,413,021	-				-0.4
1,413,021	-				+0.8
1,413,021	-				+0.6
1,413,021	-				+0.6
1,413,021	-				-2.4
1,413,021	-				+1.2
1,413,022	+				-1.0
1,413,022	+				-0.6
1,413,022	+				+0.5
1,413,022	+				-0.1
1,413,022	+				+0.3
1,413,022	+				+0.4
1,413,022	+				-1.3
1,413,022	+				+1.6
1,413,022	+				-0.9
1,413,022	+				-0.5
1,413,022	+				-1.0
1,413,024	-				-0.7
1,413,024	-				+0.8
1,413,024	-				+0.0
1,413,024	-				+0.3
1,413,024	-				+1.7
1,413,024	-				+0.3
1,413,024	-				+1.2
1,413,025	+				+1.3
1,413,025	+				-0.2
1,413,025	+				-2.1
1,413,025	+				-3.3
1,413,025	+				+1.2
1,413,025	+				-0.1
1,413,025	+				+2.3
1,413,026	-				+0.3
1,413,026	-				+0.4
1,413,026	-				-0.4
1,413,027	+				+0.1
1,413,027	+				-0.1
1,413,028	-				-2.1
1,413,028	-				+2.1
1,413,029	+				+0.2
1,413,029	+				-0.9
1,413,029	+				+0.6
1,413,031	-				+0.7
1,413,031	-				+1.2
1,413,031	-				-1.1
1,413,031	-				+0.5
1,413,031	-				+1.2
1,413,031	-				-0.6
1,413,032	+				+0.4
1,413,032	+				-0.4
1,413,032	+				+1.4
1,413,032	+				+1.4
1,413,034	-				+1.7
1,413,034	-				-0.1
1,413,034	-				-3.2
1,413,034	-				-0.7
1,413,037	-				-0.0
1,413,038	+				+1.0
1,413,044	+				+0.2
1,413,053	-				-0.4
1,413,054	+				+2.2
1,413,059	-				+0.5
1,413,074	-				+0.1
1,413,075	+				+0.2
1,413,156	+				+1.2
1,413,182	-				+0.8
1,413,183	+				+0.1
1,413,206	-		MMJJ_RS07700	0.10	-1.5
1,413,213	-		MMJJ_RS07700	0.11	+0.4
1,413,213	-		MMJJ_RS07700	0.11	+0.4
1,413,214	+		MMJJ_RS07700	0.11	-0.1
1,413,214	+		MMJJ_RS07700	0.11	-0.5
1,413,220	-		MMJJ_RS07700	0.12	+0.1
1,413,220	-		MMJJ_RS07700	0.12	+0.8
1,413,262	-		MMJJ_RS07700	0.15	+0.6
1,413,262	-		MMJJ_RS07700	0.15	+1.8
1,413,280	-		MMJJ_RS07700	0.16	-0.8
1,413,392	+		MMJJ_RS07700	0.26	-0.2
1,413,404	-		MMJJ_RS07700	0.27	-0.4
1,413,405	+		MMJJ_RS07700	0.27	-0.5
1,413,408	-		MMJJ_RS07700	0.27	+1.1
1,413,444	-		MMJJ_RS07700	0.30	-0.5
1,413,445	+		MMJJ_RS07700	0.30	+1.9
1,413,457	+		MMJJ_RS07700	0.31	-0.5
1,413,467	-		MMJJ_RS07700	0.32	-1.3
1,413,622	-		MMJJ_RS07700	0.44	-1.2
1,413,641	-		MMJJ_RS07700	0.46	+0.9
1,413,648	+		MMJJ_RS07700	0.46	+0.8
1,413,678	-		MMJJ_RS07700	0.49	+1.1
1,413,678	-		MMJJ_RS07700	0.49	+0.4
1,413,680	-		MMJJ_RS07700	0.49	+0.2
1,413,680	-		MMJJ_RS07700	0.49	+0.2
1,413,681	+		MMJJ_RS07700	0.49	-0.3
1,413,681	+		MMJJ_RS07700	0.49	-0.4
1,413,681	+		MMJJ_RS07700	0.49	+0.8
1,413,757	+		MMJJ_RS07700	0.55	-0.2
1,413,772	+		MMJJ_RS07700	0.57	-0.9
1,413,772	+		MMJJ_RS07700	0.57	+0.8
1,413,779	-		MMJJ_RS07700	0.57	+0.0
1,413,781	-		MMJJ_RS07700	0.57	+0.5
1,413,790	-		MMJJ_RS07700	0.58	-2.2
1,413,791	+				-0.6
1,413,843	+		MMJJ_RS07700	0.62	+0.3
1,413,847	-		MMJJ_RS07700	0.63	+0.7
1,413,848	+		MMJJ_RS07700	0.63	+0.4
1,413,872	+		MMJJ_RS07700	0.65	+0.5
1,413,918	-		MMJJ_RS07700	0.69	-1.2