Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS07690

Experiment: Iron excess (2.5x) , H2 media

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Iron excess (2.5x) , H2 media
1,408,883	+		MMJJ_RS07685	0.44	+0.8
1,408,893	+		MMJJ_RS07685	0.45	-1.0
1,408,916	+		MMJJ_RS07685	0.46	-0.2
1,408,972	-		MMJJ_RS07685	0.50	-0.5
1,408,973	+		MMJJ_RS07685	0.50	-0.3
1,408,992	+		MMJJ_RS07685	0.51	+0.8
1,409,029	+		MMJJ_RS07685	0.53	+0.6
1,409,040	-		MMJJ_RS07685	0.54	-0.0
1,409,040	-		MMJJ_RS07685	0.54	-0.7
1,409,040	-		MMJJ_RS07685	0.54	+1.4
1,409,041	+		MMJJ_RS07685	0.54	-0.0
1,409,041	+		MMJJ_RS07685	0.54	+0.9
1,409,041	+		MMJJ_RS07685	0.54	+1.6
1,409,046	-		MMJJ_RS07685	0.54	+0.9
1,409,046	-		MMJJ_RS07685	0.54	+0.2
1,409,061	+		MMJJ_RS07685	0.55	+0.4
1,409,061	+		MMJJ_RS07685	0.55	+2.5
1,409,139	+		MMJJ_RS07685	0.60	-0.3
1,409,162	+		MMJJ_RS07685	0.62	+0.6
1,409,162	+		MMJJ_RS07685	0.62	+0.5
1,409,165	-		MMJJ_RS07685	0.62	+1.2
1,409,166	+		MMJJ_RS07685	0.62	+1.0
1,409,216	-		MMJJ_RS07685	0.65	+1.4
1,409,216	-		MMJJ_RS07685	0.65	+0.9
1,409,217	+		MMJJ_RS07685	0.65	+1.4
1,409,217	+		MMJJ_RS07685	0.65	+1.0
1,409,222	+		MMJJ_RS07685	0.66	-0.1
1,409,222	+		MMJJ_RS07685	0.66	-0.7
1,409,225	+		MMJJ_RS07685	0.66	-0.2
1,409,225	+		MMJJ_RS07685	0.66	+1.4
1,409,267	-		MMJJ_RS07685	0.68	-0.2
1,409,280	-		MMJJ_RS07685	0.69	+0.7
1,409,281	+		MMJJ_RS07685	0.69	-0.1
1,409,299	-		MMJJ_RS07685	0.70	+1.0
1,409,311	-		MMJJ_RS07685	0.71	+1.4
1,409,311	-		MMJJ_RS07685	0.71	+0.3
1,409,315	-		MMJJ_RS07685	0.72	-0.4
1,409,315	-		MMJJ_RS07685	0.72	+0.5
1,409,316	+		MMJJ_RS07685	0.72	+2.0
1,409,316	+		MMJJ_RS07685	0.72	+0.5
1,409,320	-		MMJJ_RS07685	0.72	-0.5
1,409,320	-		MMJJ_RS07685	0.72	+0.5
1,409,320	-		MMJJ_RS07685	0.72	+0.0
1,409,413	-		MMJJ_RS07685	0.78	+1.7
1,409,429	-		MMJJ_RS07685	0.79	+0.5
1,409,429	-		MMJJ_RS07685	0.79	+1.6
1,409,429	-		MMJJ_RS07685	0.79	-1.8
1,409,430	+		MMJJ_RS07685	0.79	-1.8
1,409,435	-		MMJJ_RS07685	0.79	+1.6
1,409,436	+		MMJJ_RS07685	0.79	+0.1
1,409,436	+		MMJJ_RS07685	0.79	+1.4
1,409,460	+		MMJJ_RS07685	0.81	+0.9
1,409,486	-		MMJJ_RS07685	0.82	+1.3
1,409,501	+		MMJJ_RS07685	0.83	+0.7
1,409,501	+		MMJJ_RS07685	0.83	+0.2
1,409,543	-		MMJJ_RS07685	0.86	-0.9
1,409,544	+		MMJJ_RS07685	0.86	+1.4
1,409,544	+		MMJJ_RS07685	0.86	-0.1
1,409,575	+		MMJJ_RS07685	0.88	+0.8
1,409,579	-		MMJJ_RS07685	0.88	+0.8
1,409,595	+		MMJJ_RS07685	0.89	+0.1
1,409,637	-				+0.1
1,409,637	-				+0.0
1,409,637	-				+1.0
1,409,637	-				-1.4
1,409,637	-				+0.8
1,409,637	-				+0.7
1,409,638	+				+1.1
1,409,638	+				-1.3
1,409,638	+				+0.3
1,409,638	+				+0.4
1,409,638	+				+1.1
1,409,638	+				-0.3
1,409,642	-				-0.7
1,409,642	-				+1.0
1,409,642	-				+0.1
1,409,643	+				+0.5
1,409,643	+				+1.1
1,409,643	+				-0.9
1,409,645	-				-1.4
1,409,645	-				-0.1
1,409,645	-				-0.7
1,409,645	-				+1.1
1,409,645	-				+0.4
1,409,645	-				+0.4
1,409,645	-				+1.2
1,409,646	+				+0.8
1,409,646	+				-0.8
1,409,646	+				+0.5
1,409,646	+				-0.6
1,409,646	+				-0.7
1,409,649	-				-1.3
1,409,649	-				+1.2
1,409,649	-				-0.4
1,409,650	+				-0.1
1,409,650	+				+1.1
1,409,650	+				+1.4
1,409,650	+				+0.3
1,409,650	+				-0.2
1,409,650	+				-0.4
1,409,650	+				-0.2
1,409,651	-				+1.8
1,409,651	-				+0.4
1,409,651	-				-0.6
1,409,651	-				+1.0
1,409,651	-				-0.8
1,409,651	-				+1.7
1,409,651	-				+1.8
1,409,651	-				+0.3
1,409,651	-				+1.4
1,409,651	-				+0.8
1,409,651	-				+1.2
1,409,651	-				+0.8
1,409,651	-				+0.7
1,409,652	+				-0.3
1,409,652	+				-0.5
1,409,652	+				+0.4
1,409,652	+				+0.7
1,409,652	+				-1.0
1,409,652	+				-0.6
1,409,652	+				+1.4
1,409,652	+				+0.6
1,409,693	-				+0.3
1,409,699	+				+1.2
1,409,750	+				+0.6
1,409,750	+				-0.6
1,409,754	+				+0.7
1,409,754	+				-0.0
1,409,768	+				-2.5
1,409,781	-				-1.1
1,409,781	-				+0.5
1,409,781	-				+0.3
1,409,782	+				-1.4
1,409,782	+				-0.3
1,409,790	+				-1.0
1,409,790	+				-0.6
1,409,795	-				+1.2
1,409,797	-				-1.6
1,409,797	-				-0.2
1,409,811	-				+0.6
1,409,811	-				-2.4
1,409,811	-				+2.0
1,409,811	-				+0.2
1,409,812	+				+0.8
1,409,813	-				+0.9
1,409,813	-				+0.1
1,409,814	+				+0.5
1,409,814	+				+2.2
1,409,814	+				+1.7
1,409,814	+				-0.3
1,409,819	-				-0.1
1,409,819	-				+0.4
1,409,829	-				+1.8
1,409,829	-				+1.9
1,409,830	+				+0.3
1,409,830	+				-0.2
1,409,830	+				+1.1
1,409,830	+				+1.0
1,409,830	+				-0.2
1,409,831	-				+0.5
1,409,831	-				+1.6
1,409,831	-				-4.5
1,409,834	-				+0.4
1,409,835	+				-0.3
1,409,842	+				+1.3
1,409,858	-				+1.2
1,409,884	+				-0.1
1,409,925	+				+1.8
1,409,932	+				+0.6
1,410,017	-		MMJJ_RS07690	0.13	-0.7
1,410,027	+		MMJJ_RS07690	0.14	+1.4
1,410,027	+		MMJJ_RS07690	0.14	+0.6
1,410,061	+		MMJJ_RS07690	0.17	+0.4
1,410,084	-		MMJJ_RS07690	0.19	+0.5
1,410,119	-		MMJJ_RS07690	0.22	+1.2
1,410,119	-		MMJJ_RS07690	0.22	+0.3
1,410,120	+		MMJJ_RS07690	0.22	-1.0
1,410,134	+		MMJJ_RS07690	0.23	-0.9
1,410,140	-		MMJJ_RS07690	0.23	+0.9
1,410,140	-		MMJJ_RS07690	0.23	+0.5
1,410,141	+		MMJJ_RS07690	0.23	+1.9
1,410,141	+		MMJJ_RS07690	0.23	-2.0
1,410,144	+		MMJJ_RS07690	0.24	-0.9
1,410,144	+		MMJJ_RS07690	0.24	+1.1
1,410,144	+		MMJJ_RS07690	0.24	+0.1
1,410,144	+		MMJJ_RS07690	0.24	+1.0
1,410,183	-		MMJJ_RS07690	0.27	+1.7
1,410,184	+		MMJJ_RS07690	0.27	-0.1
1,410,184	+		MMJJ_RS07690	0.27	-0.9
1,410,185	-		MMJJ_RS07690	0.27	-1.0
1,410,209	+		MMJJ_RS07690	0.29	-0.4
1,410,209	+		MMJJ_RS07690	0.29	+0.3
1,410,228	-		MMJJ_RS07690	0.31	+0.8
1,410,320	-				+4.4
1,410,343	+		MMJJ_RS07690	0.41	-0.6
1,410,369	-		MMJJ_RS07690	0.43	+1.3
1,410,395	-		MMJJ_RS07690	0.45	-1.9
1,410,397	-		MMJJ_RS07690	0.45	+0.1
1,410,502	-		MMJJ_RS07690	0.54	-3.1
1,410,579	-		MMJJ_RS07690	0.61	+1.3
1,410,580	+		MMJJ_RS07690	0.61	+0.4
1,410,591	+		MMJJ_RS07690	0.62	+0.0
1,410,593	-		MMJJ_RS07690	0.62	+1.3
1,410,831	-		MMJJ_RS07690	0.82	+0.3
1,410,831	-		MMJJ_RS07690	0.82	+0.1
1,410,832	+		MMJJ_RS07690	0.82	+0.2
1,410,844	-		MMJJ_RS07690	0.83	-0.0
1,410,845	+		MMJJ_RS07690	0.83	+0.6
1,410,906	+		MMJJ_RS07690	0.88	-0.7
1,410,939	-				+0.5
1,410,962	+				+0.8
1,410,963	-				+0.7
1,410,970	-				+0.4
1,411,008	+				+2.0
1,411,008	+				-0.2
1,411,008	+				+3.0
1,411,009	-				-0.9
1,411,009	-				-0.2
1,411,009	-				-0.4
1,411,010	+				+0.2
1,411,010	+				+0.1
1,411,010	+				-1.2
1,411,011	-				+0.5
1,411,039	-				+1.4
1,411,044	-				+1.0
1,411,062	-				+0.6
1,411,065	-				-0.2
1,411,065	-				+1.5
1,411,066	+				+1.5
1,411,066	+				-0.7
1,411,067	-				-0.9
1,411,068	+				+0.1
1,411,068	+				-1.8
1,411,068	+				-0.0
1,411,068	+				+1.9
1,411,068	+				+0.2
1,411,072	+				-0.4
1,411,072	+				-1.2
1,411,074	-				-1.2
1,411,082	+				+1.3
1,411,095	+				-0.6
1,411,105	-				+1.0
1,411,108	-				+0.8
1,411,108	-				+1.2
1,411,109	+				+0.7
1,411,127	-				+0.0
1,411,128	+				+0.5
1,411,172	-				-1.2
1,411,186	-				+0.5
1,411,186	-				+1.9
1,411,186	-				+0.5
1,411,186	-				+0.4
1,411,187	+				+0.3
1,411,187	+				+1.5
1,411,209	-				+0.5
1,411,269	-				+0.5
1,411,323	-				-2.0
1,411,335	+		MMJJ_RS07695	0.10	+1.5
1,411,340	-		MMJJ_RS07695	0.10	+0.6
1,411,341	+		MMJJ_RS07695	0.10	+1.0
1,411,349	-		MMJJ_RS07695	0.11	+0.9
1,411,357	+		MMJJ_RS07695	0.11	+1.3
1,411,392	-		MMJJ_RS07695	0.13	-1.4
1,411,392	-		MMJJ_RS07695	0.13	+1.1
1,411,393	+		MMJJ_RS07695	0.13	+0.5
1,411,394	-		MMJJ_RS07695	0.13	+1.0
1,411,394	-		MMJJ_RS07695	0.13	+1.4
1,411,395	+		MMJJ_RS07695	0.13	-0.9
1,411,413	+		MMJJ_RS07695	0.14	+2.5
1,411,413	+		MMJJ_RS07695	0.14	+0.3
1,411,414	-		MMJJ_RS07695	0.14	+0.8
1,411,414	-		MMJJ_RS07695	0.14	-1.2
1,411,414	-		MMJJ_RS07695	0.14	-1.0
1,411,415	+		MMJJ_RS07695	0.14	+0.0
1,411,420	-		MMJJ_RS07695	0.15	+0.4
1,411,420	-		MMJJ_RS07695	0.15	+2.9
1,411,435	-		MMJJ_RS07695	0.15	+1.3
1,411,440	+		MMJJ_RS07695	0.16	-1.0
1,411,440	+		MMJJ_RS07695	0.16	+0.2
1,411,472	+		MMJJ_RS07695	0.17	+0.0
1,411,557	-		MMJJ_RS07695	0.22	-0.0
1,411,557	-		MMJJ_RS07695	0.22	+1.4
1,411,569	-		MMJJ_RS07695	0.23	+0.1
1,411,570	+		MMJJ_RS07695	0.23	+1.5
1,411,635	+		MMJJ_RS07695	0.26	+0.6
1,411,699	-		MMJJ_RS07695	0.30	-0.0
1,411,713	+		MMJJ_RS07695	0.30	+0.4
1,411,713	+		MMJJ_RS07695	0.30	+1.0
1,411,765	+		MMJJ_RS07695	0.33	-0.3
1,411,766	-		MMJJ_RS07695	0.33	+0.6
1,411,766	-		MMJJ_RS07695	0.33	+0.9
1,411,798	+		MMJJ_RS07695	0.35	+1.4
1,411,799	-		MMJJ_RS07695	0.35	-0.7
1,411,823	-		MMJJ_RS07695	0.36	+0.9
1,411,823	-		MMJJ_RS07695	0.36	+1.2
1,411,823	-		MMJJ_RS07695	0.36	+0.2
1,411,823	-		MMJJ_RS07695	0.36	+0.1
1,411,824	+		MMJJ_RS07695	0.36	-3.6
1,411,866	+		MMJJ_RS07695	0.39	+1.7
1,411,903	-		MMJJ_RS07695	0.41	+0.1
1,411,907	-		MMJJ_RS07695	0.41	+0.7
1,411,907	-		MMJJ_RS07695	0.41	-0.7
1,411,908	+		MMJJ_RS07695	0.41	+0.0
1,411,988	+		MMJJ_RS07695	0.45	+0.5