Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS07215

Experiment: Iron excess (2.5x) , H2 media

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Iron excess (2.5x) , H2 media
1,320,051	+		MMJJ_RS07205	0.81	+0.2
1,320,072	-				+1.0
1,320,094	-				+1.4
1,320,107	-				+0.3
1,320,108	+				+1.7
1,320,118	-				+1.0
1,320,139	-				+0.5
1,320,140	+				-2.4
1,320,147	-				+0.2
1,320,209	+				-0.1
1,320,216	-				+0.0
1,320,216	-				-0.2
1,320,217	+				-0.1
1,320,221	+				+1.4
1,320,221	+				+1.6
1,320,266	-		MMJJ_RS07210	0.15	-1.2
1,320,291	-		MMJJ_RS07210	0.18	+0.8
1,320,291	-		MMJJ_RS07210	0.18	-0.0
1,320,292	+		MMJJ_RS07210	0.18	+0.3
1,320,292	+		MMJJ_RS07210	0.18	-1.2
1,320,292	+		MMJJ_RS07210	0.18	+1.7
1,320,293	-		MMJJ_RS07210	0.18	-0.1
1,320,293	-		MMJJ_RS07210	0.18	+0.2
1,320,319	+		MMJJ_RS07210	0.21	+0.5
1,320,351	-		MMJJ_RS07210	0.25	+1.4
1,320,394	-		MMJJ_RS07210	0.30	-1.7
1,320,410	-		MMJJ_RS07210	0.32	-1.1
1,320,438	-		MMJJ_RS07210	0.35	-1.1
1,320,438	-		MMJJ_RS07210	0.35	+0.7
1,320,466	-		MMJJ_RS07210	0.38	+0.2
1,320,467	+		MMJJ_RS07210	0.38	+1.3
1,320,467	+		MMJJ_RS07210	0.38	+1.9
1,320,471	-		MMJJ_RS07210	0.39	+1.1
1,320,472	+		MMJJ_RS07210	0.39	+0.5
1,320,472	+		MMJJ_RS07210	0.39	-1.2
1,320,491	+		MMJJ_RS07210	0.41	-1.3
1,320,491	+		MMJJ_RS07210	0.41	-0.5
1,320,491	+		MMJJ_RS07210	0.41	+0.0
1,320,506	-		MMJJ_RS07210	0.43	-0.2
1,320,506	-		MMJJ_RS07210	0.43	+1.5
1,320,507	+		MMJJ_RS07210	0.43	+0.1
1,320,541	+		MMJJ_RS07210	0.47	+1.9
1,320,541	+		MMJJ_RS07210	0.47	-0.3
1,320,541	+		MMJJ_RS07210	0.47	+1.7
1,320,568	+		MMJJ_RS07210	0.50	-0.5
1,320,573	-		MMJJ_RS07210	0.51	-0.1
1,320,573	-		MMJJ_RS07210	0.51	+1.0
1,320,573	-		MMJJ_RS07210	0.51	+0.9
1,320,573	-		MMJJ_RS07210	0.51	+1.3
1,320,573	-		MMJJ_RS07210	0.51	-0.5
1,320,574	+		MMJJ_RS07210	0.51	+1.0
1,320,580	+		MMJJ_RS07210	0.52	+1.1
1,320,614	-		MMJJ_RS07210	0.56	+0.7
1,320,615	+		MMJJ_RS07210	0.56	-0.4
1,320,619	+		MMJJ_RS07210	0.56	-1.7
1,320,731	-		MMJJ_RS07210	0.69	+0.6
1,320,820	-		MMJJ_RS07210	0.80	-0.7
1,320,821	+		MMJJ_RS07210	0.80	+1.5
1,320,824	-		MMJJ_RS07210	0.80	-0.1
1,320,824	-		MMJJ_RS07210	0.80	-0.4
1,320,825	+		MMJJ_RS07210	0.80	+0.2
1,320,826	-		MMJJ_RS07210	0.80	+1.7
1,320,826	-		MMJJ_RS07210	0.80	-1.0
1,320,826	-		MMJJ_RS07210	0.80	-0.8
1,320,826	-		MMJJ_RS07210	0.80	+1.2
1,320,827	+		MMJJ_RS07210	0.81	+0.0
1,320,827	+		MMJJ_RS07210	0.81	+1.0
1,320,865	-		MMJJ_RS07210	0.85	-0.4
1,320,993	+				-0.5
1,321,015	+				+1.2
1,321,015	+				+0.8
1,321,015	+				+1.5
1,321,040	-				+0.6
1,321,069	-				+1.3
1,321,069	-				+2.0
1,321,070	+				-0.4
1,321,070	+				+1.5
1,321,077	-				+1.0
1,321,077	-				-0.4
1,321,078	+				+0.4
1,321,078	+				-2.7
1,321,078	+				-2.2
1,321,167	+		MMJJ_RS07215	0.13	+0.2
1,321,167	+		MMJJ_RS07215	0.13	+0.8
1,321,182	+		MMJJ_RS07215	0.14	+0.3
1,321,223	+		MMJJ_RS07215	0.18	+0.5
1,321,224	-		MMJJ_RS07215	0.18	-0.1
1,321,224	-		MMJJ_RS07215	0.18	+1.2
1,321,225	+		MMJJ_RS07215	0.18	+0.1
1,321,225	+		MMJJ_RS07215	0.18	+1.5
1,321,225	+		MMJJ_RS07215	0.18	+0.4
1,321,228	-		MMJJ_RS07215	0.19	+0.9
1,321,228	-		MMJJ_RS07215	0.19	+0.3
1,321,229	+		MMJJ_RS07215	0.19	+0.4
1,321,234	+		MMJJ_RS07215	0.19	-0.4
1,321,237	-		MMJJ_RS07215	0.20	+1.1
1,321,237	-		MMJJ_RS07215	0.20	+1.4
1,321,238	+		MMJJ_RS07215	0.20	-0.2
1,321,238	+		MMJJ_RS07215	0.20	+1.0
1,321,238	+		MMJJ_RS07215	0.20	+1.1
1,321,261	-		MMJJ_RS07215	0.22	+0.6
1,321,265	-		MMJJ_RS07215	0.22	+0.1
1,321,265	-		MMJJ_RS07215	0.22	-0.7
1,321,265	-		MMJJ_RS07215	0.22	+0.6
1,321,266	+		MMJJ_RS07215	0.23	-0.5
1,321,285	-		MMJJ_RS07215	0.24	-0.0
1,321,300	-		MMJJ_RS07215	0.26	-1.5
1,321,300	-		MMJJ_RS07215	0.26	+0.4
1,321,301	+		MMJJ_RS07215	0.26	+0.3
1,321,329	-		MMJJ_RS07215	0.29	+0.5
1,321,329	-		MMJJ_RS07215	0.29	+0.4
1,321,406	+		MMJJ_RS07215	0.36	+1.1
1,321,423	-		MMJJ_RS07215	0.38	-0.4
1,321,462	-		MMJJ_RS07215	0.42	+1.2
1,321,462	-		MMJJ_RS07215	0.42	+0.9
1,321,462	-		MMJJ_RS07215	0.42	-1.2
1,321,462	-		MMJJ_RS07215	0.42	+1.0
1,321,462	-		MMJJ_RS07215	0.42	-0.2
1,321,463	+		MMJJ_RS07215	0.42	-0.1
1,321,463	+		MMJJ_RS07215	0.42	+0.6
1,321,613	+		MMJJ_RS07215	0.57	-0.2
1,321,627	-		MMJJ_RS07215	0.58	+0.2
1,321,628	+		MMJJ_RS07215	0.58	-0.8
1,321,646	+		MMJJ_RS07215	0.60	+0.6
1,321,651	-		MMJJ_RS07215	0.61	+0.8
1,321,660	+		MMJJ_RS07215	0.62	-0.5
1,321,679	+		MMJJ_RS07215	0.63	-0.3
1,321,685	+		MMJJ_RS07215	0.64	+1.1
1,321,687	-		MMJJ_RS07215	0.64	-3.0
1,321,695	+		MMJJ_RS07215	0.65	-0.7
1,321,697	-		MMJJ_RS07215	0.65	-3.1
1,321,717	-		MMJJ_RS07215	0.67	+1.4
1,321,718	+		MMJJ_RS07215	0.67	-0.5
1,321,718	+		MMJJ_RS07215	0.67	+1.4
1,321,718	+		MMJJ_RS07215	0.67	+0.1
1,321,719	-		MMJJ_RS07215	0.67	-0.2
1,321,719	-		MMJJ_RS07215	0.67	-0.2
1,321,720	+		MMJJ_RS07215	0.68	+1.8
1,321,739	+		MMJJ_RS07215	0.69	+0.3
1,321,783	-		MMJJ_RS07215	0.74	+1.1
1,321,784	+		MMJJ_RS07215	0.74	-0.6
1,321,838	+		MMJJ_RS07215	0.79	-0.1
1,321,873	-		MMJJ_RS07215	0.83	-0.1
1,321,874	+		MMJJ_RS07215	0.83	-0.3
1,321,874	+		MMJJ_RS07215	0.83	-0.3
1,321,912	-		MMJJ_RS07215	0.87	+1.5
1,321,926	-		MMJJ_RS07215	0.88	-0.2
1,321,928	-		MMJJ_RS07215	0.88	-0.7
1,321,928	-		MMJJ_RS07215	0.88	+0.1
1,321,929	+		MMJJ_RS07215	0.88	+1.5
1,321,959	-				+0.9
1,321,959	-				+2.3
1,322,006	+				+1.3
1,322,021	-				+0.6
1,322,021	-				+0.8
1,322,021	-				+0.5
1,322,022	+				+0.4
1,322,022	+				+0.7
1,322,022	+				-0.8
1,322,031	-				+0.9
1,322,031	-				+0.5
1,322,048	-				+0.8
1,322,049	+				+1.1
1,322,068	-				+0.4
1,322,069	+				+0.8
1,322,097	-				+0.1
1,322,098	+				-1.0
1,322,098	+				+1.1
1,322,099	-				+0.2
1,322,099	-				+0.6
1,322,101	-				-1.5
1,322,101	-				+0.7
1,322,101	-				+0.6
1,322,101	-				+1.9
1,322,101	-				+1.8
1,322,101	-				+0.3
1,322,101	-				+1.1
1,322,102	+				+0.4
1,322,102	+				+0.8
1,322,102	+				-0.1
1,322,102	+				+0.6
1,322,102	+				+1.2
1,322,102	+				+0.2
1,322,102	+				+1.5
1,322,104	-				+0.7
1,322,105	+				+1.5
1,322,105	+				+1.0
1,322,105	+				+0.3
1,322,105	+				-2.7
1,322,106	-				+0.7
1,322,125	-				+0.4
1,322,125	-				+0.3
1,322,126	+				+0.1
1,322,135	+				-0.1
1,322,145	+				+0.6
1,322,157	-				-0.3
1,322,313	-		MMJJ_RS07220	0.19	-1.2
1,322,313	-		MMJJ_RS07220	0.19	+1.4
1,322,404	-		MMJJ_RS07220	0.30	-1.7
1,322,405	+		MMJJ_RS07220	0.30	-0.9
1,322,406	-		MMJJ_RS07220	0.30	+0.7
1,322,413	-		MMJJ_RS07220	0.31	-0.0
1,322,413	-		MMJJ_RS07220	0.31	+1.6
1,322,414	+		MMJJ_RS07220	0.31	-0.4
1,322,414	+		MMJJ_RS07220	0.31	+1.1
1,322,414	+		MMJJ_RS07220	0.31	+0.2
1,322,417	-		MMJJ_RS07220	0.31	+1.3
1,322,417	-		MMJJ_RS07220	0.31	-0.3
1,322,417	-		MMJJ_RS07220	0.31	-1.0
1,322,417	-		MMJJ_RS07220	0.31	+0.3
1,322,417	-		MMJJ_RS07220	0.31	+0.7
1,322,417	-		MMJJ_RS07220	0.31	-0.9
1,322,417	-		MMJJ_RS07220	0.31	+0.5
1,322,418	+		MMJJ_RS07220	0.31	-0.5
1,322,418	+		MMJJ_RS07220	0.31	-0.5
1,322,418	+		MMJJ_RS07220	0.31	+0.1
1,322,418	+		MMJJ_RS07220	0.31	+0.4
1,322,418	+		MMJJ_RS07220	0.31	-0.5
1,322,440	+		MMJJ_RS07220	0.34	-0.8
1,322,490	-		MMJJ_RS07220	0.40	-1.4
1,322,490	-		MMJJ_RS07220	0.40	+1.1
1,322,575	-		MMJJ_RS07220	0.50	+1.0
1,322,581	-		MMJJ_RS07220	0.50	+0.1
1,322,582	+		MMJJ_RS07220	0.51	-0.7
1,322,582	+		MMJJ_RS07220	0.51	+0.2
1,322,582	+		MMJJ_RS07220	0.51	+2.0
1,322,582	+		MMJJ_RS07220	0.51	+1.1
1,322,583	-		MMJJ_RS07220	0.51	-2.4
1,322,583	-		MMJJ_RS07220	0.51	+1.1
1,322,583	-		MMJJ_RS07220	0.51	+0.2
1,322,583	-		MMJJ_RS07220	0.51	-0.1
1,322,584	+		MMJJ_RS07220	0.51	-0.8
1,322,584	+		MMJJ_RS07220	0.51	-1.3
1,322,606	-		MMJJ_RS07220	0.53	+0.9
1,322,606	-		MMJJ_RS07220	0.53	+1.2
1,322,606	-		MMJJ_RS07220	0.53	+0.4
1,322,607	+		MMJJ_RS07220	0.53	+0.2
1,322,607	+		MMJJ_RS07220	0.53	+1.2
1,322,608	-		MMJJ_RS07220	0.54	+1.2
1,322,608	-		MMJJ_RS07220	0.54	+1.1
1,322,615	+		MMJJ_RS07220	0.54	-0.3
1,322,619	+		MMJJ_RS07220	0.55	+1.4
1,322,658	-		MMJJ_RS07220	0.59	-0.3
1,322,658	-		MMJJ_RS07220	0.59	+1.6
1,322,683	-		MMJJ_RS07220	0.62	+1.1
1,322,735	-		MMJJ_RS07220	0.69	+1.1
1,322,736	+		MMJJ_RS07220	0.69	+0.5
1,322,747	-		MMJJ_RS07220	0.70	+1.3
1,322,762	+		MMJJ_RS07220	0.72	+1.6
1,322,768	-		MMJJ_RS07220	0.72	+2.7
1,322,768	-		MMJJ_RS07220	0.72	-0.1
1,322,768	-		MMJJ_RS07220	0.72	-0.4
1,322,769	+		MMJJ_RS07220	0.73	-0.6
1,322,769	+		MMJJ_RS07220	0.73	+0.5
1,322,773	-		MMJJ_RS07220	0.73	-0.4
1,322,774	+		MMJJ_RS07220	0.73	+0.7
1,322,775	-		MMJJ_RS07220	0.73	+0.8
1,322,776	+		MMJJ_RS07220	0.73	+2.4
1,322,779	-		MMJJ_RS07220	0.74	-1.2
1,322,815	-		MMJJ_RS07220	0.78	+0.1
1,322,864	-		MMJJ_RS07220	0.84	+0.2
1,322,865	+		MMJJ_RS07220	0.84	-0.2
1,322,902	+		MMJJ_RS07220	0.88	+2.6
1,322,979	+				-0.5
1,322,979	+				+1.4
1,322,980	-				-0.8
1,322,983	+				+0.4
1,323,003	-				-0.5
1,323,004	+				+0.6
1,323,004	+				-0.3
1,323,004	+				+1.7
1,323,004	+				+1.4
1,323,017	-				+1.4
1,323,027	+				+0.0
1,323,037	+				+0.3