Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS05510

Experiment: Iron excess (2.5x) , H2 media

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Iron excess (2.5x) , H2 media
1,031,163	-		MMJJ_RS05505	0.69	-1.6
1,031,197	+		MMJJ_RS05505	0.71	+0.6
1,031,209	-		MMJJ_RS05505	0.71	-0.1
1,031,210	+		MMJJ_RS05505	0.71	-0.5
1,031,224	+		MMJJ_RS05505	0.72	+0.1
1,031,243	+		MMJJ_RS05505	0.72	+0.8
1,031,244	-		MMJJ_RS05505	0.72	-1.0
1,031,244	-		MMJJ_RS05505	0.72	+2.8
1,031,244	-		MMJJ_RS05505	0.72	-0.4
1,031,244	-		MMJJ_RS05505	0.72	+0.7
1,031,245	+		MMJJ_RS05505	0.73	+0.8
1,031,245	+		MMJJ_RS05505	0.73	-0.9
1,031,245	+		MMJJ_RS05505	0.73	+1.2
1,031,259	-		MMJJ_RS05505	0.73	+0.5
1,031,272	-		MMJJ_RS05505	0.74	-0.1
1,031,272	-		MMJJ_RS05505	0.74	+0.8
1,031,272	-		MMJJ_RS05505	0.74	+1.0
1,031,272	-		MMJJ_RS05505	0.74	+1.2
1,031,272	-		MMJJ_RS05505	0.74	+0.8
1,031,272	-		MMJJ_RS05505	0.74	+1.7
1,031,273	+		MMJJ_RS05505	0.74	+1.6
1,031,273	+		MMJJ_RS05505	0.74	-1.9
1,031,296	+		MMJJ_RS05505	0.74	+0.0
1,031,313	-		MMJJ_RS05505	0.75	+0.2
1,031,313	-		MMJJ_RS05505	0.75	-2.1
1,031,313	-		MMJJ_RS05505	0.75	-0.1
1,031,313	-		MMJJ_RS05505	0.75	-0.2
1,031,313	-		MMJJ_RS05505	0.75	+2.5
1,031,313	-		MMJJ_RS05505	0.75	+0.7
1,031,314	+		MMJJ_RS05505	0.75	+1.8
1,031,314	+		MMJJ_RS05505	0.75	-0.2
1,031,314	+		MMJJ_RS05505	0.75	+0.4
1,031,314	+		MMJJ_RS05505	0.75	+1.2
1,031,314	+		MMJJ_RS05505	0.75	+1.5
1,031,314	+		MMJJ_RS05505	0.75	+1.5
1,031,317	-		MMJJ_RS05505	0.75	+0.5
1,031,318	+		MMJJ_RS05505	0.75	-0.3
1,031,320	+		MMJJ_RS05505	0.75	-0.5
1,031,324	-		MMJJ_RS05505	0.75	+0.6
1,031,324	-		MMJJ_RS05505	0.75	-0.4
1,031,359	+		MMJJ_RS05505	0.77	-0.6
1,031,367	-		MMJJ_RS05505	0.77	+0.8
1,031,367	-		MMJJ_RS05505	0.77	-0.7
1,031,384	-		MMJJ_RS05505	0.78	+0.4
1,031,392	-		MMJJ_RS05505	0.78	+0.7
1,031,392	-		MMJJ_RS05505	0.78	-0.1
1,031,394	-		MMJJ_RS05505	0.78	+1.6
1,031,394	-		MMJJ_RS05505	0.78	+1.4
1,031,394	-		MMJJ_RS05505	0.78	+0.6
1,031,394	-		MMJJ_RS05505	0.78	+1.1
1,031,394	-		MMJJ_RS05505	0.78	+0.0
1,031,395	+		MMJJ_RS05505	0.78	-0.1
1,031,395	+		MMJJ_RS05505	0.78	+0.5
1,031,400	-		MMJJ_RS05505	0.78	+0.4
1,031,400	-		MMJJ_RS05505	0.78	-2.3
1,031,400	-		MMJJ_RS05505	0.78	+0.2
1,031,401	+		MMJJ_RS05505	0.78	+0.1
1,031,404	+		MMJJ_RS05505	0.78	+1.0
1,031,404	-		MMJJ_RS05505	0.78	+0.4
1,031,426	+		MMJJ_RS05505	0.79	+0.4
1,031,460	-		MMJJ_RS05505	0.81	+1.0
1,031,460	-		MMJJ_RS05505	0.81	-0.2
1,031,460	-		MMJJ_RS05505	0.81	+1.1
1,031,468	+		MMJJ_RS05505	0.81	+0.4
1,031,472	-		MMJJ_RS05505	0.81	-1.4
1,031,472	-		MMJJ_RS05505	0.81	-1.1
1,031,472	-		MMJJ_RS05505	0.81	-1.6
1,031,473	+		MMJJ_RS05505	0.81	+0.5
1,031,473	+		MMJJ_RS05505	0.81	-2.4
1,031,474	-		MMJJ_RS05505	0.81	-0.7
1,031,474	-		MMJJ_RS05505	0.81	+0.4
1,031,475	+		MMJJ_RS05505	0.81	-2.3
1,031,475	+		MMJJ_RS05505	0.81	+0.1
1,031,475	+		MMJJ_RS05505	0.81	+1.1
1,031,475	+		MMJJ_RS05505	0.81	+0.2
1,031,485	-		MMJJ_RS05505	0.82	+1.9
1,031,486	+		MMJJ_RS05505	0.82	+0.7
1,031,490	-		MMJJ_RS05505	0.82	+1.3
1,031,490	-		MMJJ_RS05505	0.82	+0.2
1,031,491	+		MMJJ_RS05505	0.82	+1.5
1,031,491	+		MMJJ_RS05505	0.82	-1.4
1,031,522	+		MMJJ_RS05505	0.83	+1.0
1,031,522	+		MMJJ_RS05505	0.83	-0.0
1,031,526	+		MMJJ_RS05505	0.83	+1.0
1,031,526	+		MMJJ_RS05505	0.83	-1.8
1,031,543	-		MMJJ_RS05505	0.84	+0.8
1,031,557	-		MMJJ_RS05505	0.84	+0.9
1,031,558	+		MMJJ_RS05505	0.84	+1.2
1,031,560	-		MMJJ_RS05505	0.84	+1.3
1,031,572	-		MMJJ_RS05505	0.85	+0.9
1,031,575	-		MMJJ_RS05505	0.85	+0.5
1,031,576	+		MMJJ_RS05505	0.85	+1.1
1,031,581	-		MMJJ_RS05505	0.85	+0.7
1,031,582	+		MMJJ_RS05505	0.85	+1.3
1,031,582	+		MMJJ_RS05505	0.85	+0.6
1,031,620	-		MMJJ_RS05505	0.87	-0.4
1,031,620	-		MMJJ_RS05505	0.87	+0.2
1,031,621	+		MMJJ_RS05505	0.87	+1.5
1,031,672	-		MMJJ_RS05505	0.89	-0.1
1,031,673	+		MMJJ_RS05505	0.89	+0.1
1,031,673	+		MMJJ_RS05505	0.89	-1.3
1,031,679	-		MMJJ_RS05505	0.89	+0.8
1,031,679	-		MMJJ_RS05505	0.89	+2.6
1,031,727	+				+1.6
1,031,727	+				+0.1
1,031,727	+				+0.3
1,031,727	+				-1.2
1,031,727	+				+1.1
1,031,727	+				+0.0
1,031,727	+				-1.2
1,031,739	-				-2.6
1,031,743	-				+1.3
1,031,751	+				+0.2
1,031,755	+				+2.6
1,031,760	-				+0.2
1,031,797	-				+1.2
1,031,813	-				-1.9
1,031,814	+				+0.3
1,031,836	+				+0.9
1,031,925	-				+1.5
1,031,925	-				+0.3
1,031,925	-				+1.1
1,031,925	-				+0.1
1,031,926	+				+1.2
1,031,941	-				+0.5
1,031,944	-				-0.4
1,031,955	-				+0.9
1,032,016	+				+0.8
1,032,046	+				-0.3
1,032,054	-				+1.2
1,032,054	-				+1.6
1,032,055	+				+0.7
1,032,055	+				+1.0
1,032,055	+				-0.5
1,032,055	+				+0.5
1,032,074	-				+0.8
1,032,075	+				+2.2
1,032,077	-				+0.8
1,032,077	-				+0.0
1,032,094	-				+1.4
1,032,094	-				+0.7
1,032,095	+				+0.5
1,032,104	-				+1.1
1,032,150	-				+1.2
1,032,150	-				+2.8
1,032,150	-				+0.2
1,032,150	-				+0.3
1,032,150	-				+1.2
1,032,150	-				+0.2
1,032,151	+				+0.5
1,032,151	+				+1.3
1,032,172	-				+2.0
1,032,172	-				+1.6
1,032,172	-				+0.6
1,032,172	-				+1.4
1,032,172	-				+0.9
1,032,219	+		MMJJ_RS05510	0.23	-0.2
1,032,219	-		MMJJ_RS05510	0.23	+2.2
1,032,219	-		MMJJ_RS05510	0.23	+0.4
1,032,219	-		MMJJ_RS05510	0.23	+0.1
1,032,220	+		MMJJ_RS05510	0.23	+0.6
1,032,220	+		MMJJ_RS05510	0.23	+0.3
1,032,221	-		MMJJ_RS05510	0.24	+0.3
1,032,221	-		MMJJ_RS05510	0.24	-0.6
1,032,221	-		MMJJ_RS05510	0.24	-0.0
1,032,222	+		MMJJ_RS05510	0.24	+0.4
1,032,222	+		MMJJ_RS05510	0.24	-0.1
1,032,222	+		MMJJ_RS05510	0.24	-0.8
1,032,226	-		MMJJ_RS05510	0.25	+0.2
1,032,226	-		MMJJ_RS05510	0.25	+1.0
1,032,227	+		MMJJ_RS05510	0.25	+1.6
1,032,228	-		MMJJ_RS05510	0.26	-0.6
1,032,228	-		MMJJ_RS05510	0.26	+0.7
1,032,228	-		MMJJ_RS05510	0.26	+0.6
1,032,228	-		MMJJ_RS05510	0.26	+0.6
1,032,229	+		MMJJ_RS05510	0.26	-0.2
1,032,229	+		MMJJ_RS05510	0.26	+0.4
1,032,229	+		MMJJ_RS05510	0.26	+0.6
1,032,229	+		MMJJ_RS05510	0.26	+0.9
1,032,229	+		MMJJ_RS05510	0.26	+0.4
1,032,229	+		MMJJ_RS05510	0.26	-0.3
1,032,246	+		MMJJ_RS05510	0.31	+2.9
1,032,284	+		MMJJ_RS05510	0.43	+0.9
1,032,284	+		MMJJ_RS05510	0.43	-1.2
1,032,294	-		MMJJ_RS05510	0.47	-1.3
1,032,331	-		MMJJ_RS05510	0.58	+0.7
1,032,357	-		MMJJ_RS05510	0.66	-0.1
1,032,391	+		MMJJ_RS05510	0.77	+0.1
1,032,393	+		MMJJ_RS05510	0.78	+1.0
1,032,579	+		MMJJ_RS05515	0.10	-0.8
1,032,617	+		MMJJ_RS05515	0.14	-1.1
1,033,395	+		MMJJ_RS05515	0.86	-1.6
1,033,434	+		MMJJ_RS05515	0.89	-2.2