Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11350

Experiment: R2A with sulfate 250 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with sulfate 250 mM
2,514,738	+		LRK54_RS11345	0.18	-0.2
2,514,738	+		LRK54_RS11345	0.18	-0.7
2,514,738	+		LRK54_RS11345	0.18	+0.7
2,514,738	+		LRK54_RS11345	0.18	-1.1
2,514,738	+		LRK54_RS11345	0.18	+0.4
2,514,738	+		LRK54_RS11345	0.18	-0.2
2,514,738	+		LRK54_RS11345	0.18	+0.2
2,514,738	+		LRK54_RS11345	0.18	-0.3
2,514,738	+		LRK54_RS11345	0.18	-0.4
2,514,738	+		LRK54_RS11345	0.18	-0.1
2,514,738	+		LRK54_RS11345	0.18	-0.4
2,514,738	+		LRK54_RS11345	0.18	-0.1
2,514,738	+		LRK54_RS11345	0.18	-0.1
2,514,738	+		LRK54_RS11345	0.18	-1.1
2,514,738	+		LRK54_RS11345	0.18	+1.6
2,514,738	+		LRK54_RS11345	0.18	-0.6
2,514,738	+		LRK54_RS11345	0.18	-1.1
2,514,738	+		LRK54_RS11345	0.18	-0.7
2,514,738	+		LRK54_RS11345	0.18	-0.4
2,514,739	-		LRK54_RS11345	0.18	+0.3
2,514,739	-		LRK54_RS11345	0.18	+0.5
2,514,739	-		LRK54_RS11345	0.18	-0.4
2,514,739	-		LRK54_RS11345	0.18	+0.7
2,514,739	-		LRK54_RS11345	0.18	+0.7
2,514,739	-		LRK54_RS11345	0.18	-0.0
2,514,739	-		LRK54_RS11345	0.18	-0.6
2,514,739	-		LRK54_RS11345	0.18	-1.1
2,514,739	-		LRK54_RS11345	0.18	+0.9
2,514,739	-		LRK54_RS11345	0.18	+0.6
2,514,739	-		LRK54_RS11345	0.18	-0.1
2,514,739	-		LRK54_RS11345	0.18	+1.4
2,514,739	-		LRK54_RS11345	0.18	-0.8
2,514,739	-		LRK54_RS11345	0.18	-0.6
2,514,739	-		LRK54_RS11345	0.18	-1.3
2,514,739	-		LRK54_RS11345	0.18	-0.9
2,514,739	-		LRK54_RS11345	0.18	+0.8
2,514,739	-		LRK54_RS11345	0.18	+0.7
2,514,739	-		LRK54_RS11345	0.18	+0.7
2,514,739	-		LRK54_RS11345	0.18	-0.4
2,514,739	-		LRK54_RS11345	0.18	-2.0
2,514,739	-		LRK54_RS11345	0.18	+0.4
2,514,840	+		LRK54_RS11345	0.29	+0.2
2,514,859	-		LRK54_RS11345	0.31	+1.1
2,514,859	-		LRK54_RS11345	0.31	+1.2
2,514,859	-		LRK54_RS11345	0.31	-2.3
2,514,912	+		LRK54_RS11345	0.37	-0.2
2,514,912	+		LRK54_RS11345	0.37	+0.8
2,514,912	+		LRK54_RS11345	0.37	-0.6
2,514,912	+		LRK54_RS11345	0.37	-1.0
2,514,912	+		LRK54_RS11345	0.37	-1.1
2,514,912	+		LRK54_RS11345	0.37	+1.2
2,514,912	+		LRK54_RS11345	0.37	-0.2
2,514,912	+		LRK54_RS11345	0.37	-2.2
2,514,912	+		LRK54_RS11345	0.37	-0.1
2,514,912	+		LRK54_RS11345	0.37	-0.3
2,514,912	+		LRK54_RS11345	0.37	-0.7
2,514,912	+		LRK54_RS11345	0.37	+0.4
2,514,912	+		LRK54_RS11345	0.37	+1.2
2,514,913	-		LRK54_RS11345	0.37	+0.0
2,514,913	-		LRK54_RS11345	0.37	+0.6
2,514,913	-		LRK54_RS11345	0.37	+0.4
2,514,913	-		LRK54_RS11345	0.37	-0.6
2,514,913	-		LRK54_RS11345	0.37	-0.4
2,514,913	-		LRK54_RS11345	0.37	+0.2
2,514,913	-		LRK54_RS11345	0.37	+0.1
2,514,913	-		LRK54_RS11345	0.37	-0.1
2,514,913	-		LRK54_RS11345	0.37	-0.5
2,514,913	-		LRK54_RS11345	0.37	+0.7
2,514,969	+		LRK54_RS11345	0.43	-1.3
2,514,969	+		LRK54_RS11345	0.43	+1.0
2,514,969	+		LRK54_RS11345	0.43	-1.8
2,514,969	+		LRK54_RS11345	0.43	-0.4
2,514,969	+		LRK54_RS11345	0.43	+0.3
2,514,969	+		LRK54_RS11345	0.43	+1.1
2,514,970	-		LRK54_RS11345	0.44	+0.2
2,514,970	-		LRK54_RS11345	0.44	-0.6
2,514,970	-		LRK54_RS11345	0.44	+0.9
2,515,179	+		LRK54_RS11345	0.67	-0.6
2,515,179	+		LRK54_RS11345	0.67	-0.4
2,515,180	-		LRK54_RS11345	0.67	-0.2
2,515,180	-		LRK54_RS11345	0.67	+1.5
2,515,180	-		LRK54_RS11345	0.67	-2.4
2,515,180	-		LRK54_RS11345	0.67	+1.7
2,515,225	+		LRK54_RS11345	0.72	-2.5
2,515,225	+		LRK54_RS11345	0.72	-0.9
2,515,225	+		LRK54_RS11345	0.72	-1.3
2,515,225	+		LRK54_RS11345	0.72	+0.2
2,515,225	+		LRK54_RS11345	0.72	+1.2
2,515,225	+		LRK54_RS11345	0.72	+1.7
2,515,225	+		LRK54_RS11345	0.72	-0.8
2,515,225	+		LRK54_RS11345	0.72	+0.0
2,515,225	+		LRK54_RS11345	0.72	+2.1
2,515,225	+		LRK54_RS11345	0.72	-0.4
2,515,225	+		LRK54_RS11345	0.72	+0.3
2,515,225	+		LRK54_RS11345	0.72	-0.0
2,515,225	+		LRK54_RS11345	0.72	-0.3
2,515,225	+		LRK54_RS11345	0.72	-0.3
2,515,225	+		LRK54_RS11345	0.72	+0.6
2,515,226	-		LRK54_RS11345	0.72	-0.3
2,515,226	-		LRK54_RS11345	0.72	+0.6
2,515,226	-		LRK54_RS11345	0.72	-2.1
2,515,226	-		LRK54_RS11345	0.72	+0.1
2,515,226	-		LRK54_RS11345	0.72	-0.3
2,515,226	-		LRK54_RS11345	0.72	-1.0
2,515,226	-		LRK54_RS11345	0.72	+0.2
2,515,226	-		LRK54_RS11345	0.72	+0.0
2,515,226	-		LRK54_RS11345	0.72	-1.1
2,515,287	+		LRK54_RS11345	0.79	-0.5
2,515,287	+		LRK54_RS11345	0.79	-0.9
2,515,287	+		LRK54_RS11345	0.79	-1.4
2,515,287	+		LRK54_RS11345	0.79	+0.7
2,515,287	+		LRK54_RS11345	0.79	+0.6
2,515,287	+		LRK54_RS11345	0.79	+0.7
2,515,287	+		LRK54_RS11345	0.79	-0.6
2,515,287	+		LRK54_RS11345	0.79	+0.2
2,515,287	+		LRK54_RS11345	0.79	-1.1
2,515,288	-		LRK54_RS11345	0.79	-1.4
2,515,288	-		LRK54_RS11345	0.79	-0.5
2,515,288	-		LRK54_RS11345	0.79	+0.5
2,515,288	-		LRK54_RS11345	0.79	+0.2
2,515,288	-		LRK54_RS11345	0.79	-0.1
2,515,288	-		LRK54_RS11345	0.79	+0.7
2,515,288	-		LRK54_RS11345	0.79	+1.0
2,515,288	-		LRK54_RS11345	0.79	-0.9
2,515,288	-		LRK54_RS11345	0.79	-2.9
2,515,288	-		LRK54_RS11345	0.79	-0.1
2,515,288	-		LRK54_RS11345	0.79	+0.4
2,515,288	-		LRK54_RS11345	0.79	-0.8
2,515,495	+				-1.0
2,515,495	+				+1.3
2,515,496	-				-0.6
2,515,496	-				-0.8
2,515,747	+				-2.5
2,515,747	+				+1.2
2,515,747	+				-0.3
2,515,747	+				-0.1
2,515,747	+				-0.2
2,515,747	+				+0.7
2,515,747	+				-0.6
2,515,747	+				+0.2
2,515,747	+				-0.6
2,515,747	+				+1.7
2,515,747	+				+1.3
2,515,747	+				-0.6
2,515,747	+				+0.5
2,515,747	+				+0.1
2,515,747	+				+0.3
2,515,747	+				+0.2
2,515,747	+				-0.7
2,515,748	-				-1.6
2,515,748	-				-1.3
2,515,748	-				-0.7
2,515,748	-				-0.6
2,515,748	-				+0.8
2,515,748	-				+0.7
2,515,748	-				-0.4
2,515,748	-				+0.2
2,515,748	-				+0.7
2,515,748	-				+0.0
2,515,748	-				+0.3
2,515,748	-				+0.7
2,515,748	-				+0.3
2,515,748	-				+1.2
2,515,748	-				-0.1
2,515,748	-				-1.1
2,515,748	-				+0.6
2,515,918	+		LRK54_RS11350	0.15	+0.2
2,515,918	+		LRK54_RS11350	0.15	-0.8
2,515,919	-		LRK54_RS11350	0.15	-0.8
2,515,919	-		LRK54_RS11350	0.15	-0.2
2,515,919	-		LRK54_RS11350	0.15	-1.7
2,515,919	-		LRK54_RS11350	0.15	+0.3
2,515,960	+		LRK54_RS11350	0.18	+1.1
2,515,960	+		LRK54_RS11350	0.18	+1.4
2,515,960	+		LRK54_RS11350	0.18	+0.3
2,515,960	+		LRK54_RS11350	0.18	+0.9
2,515,960	+		LRK54_RS11350	0.18	-2.3
2,515,960	+		LRK54_RS11350	0.18	+0.6
2,515,960	+		LRK54_RS11350	0.18	-0.7
2,515,960	+		LRK54_RS11350	0.18	+0.2
2,515,960	+		LRK54_RS11350	0.18	+2.3
2,515,960	+		LRK54_RS11350	0.18	+0.7
2,515,960	+		LRK54_RS11350	0.18	-0.8
2,515,960	+		LRK54_RS11350	0.18	+0.7
2,515,960	+		LRK54_RS11350	0.18	-0.6
2,515,960	+		LRK54_RS11350	0.18	+0.7
2,515,960	+		LRK54_RS11350	0.18	+0.2
2,515,960	+		LRK54_RS11350	0.18	+0.9
2,515,960	+		LRK54_RS11350	0.18	+1.7
2,515,960	+		LRK54_RS11350	0.18	+0.3
2,515,960	+		LRK54_RS11350	0.18	+1.2
2,515,960	+		LRK54_RS11350	0.18	-0.4
2,515,960	+		LRK54_RS11350	0.18	-2.3
2,515,960	+		LRK54_RS11350	0.18	+0.7
2,515,960	+		LRK54_RS11350	0.18	-0.9
2,515,960	+		LRK54_RS11350	0.18	-1.4
2,515,960	+		LRK54_RS11350	0.18	+0.6
2,515,960	+		LRK54_RS11350	0.18	-0.3
2,515,960	+		LRK54_RS11350	0.18	-2.6
2,515,960	+		LRK54_RS11350	0.18	+1.4
2,515,960	+		LRK54_RS11350	0.18	-0.5
2,515,960	+		LRK54_RS11350	0.18	-0.1
2,515,960	+		LRK54_RS11350	0.18	+0.5
2,515,960	+		LRK54_RS11350	0.18	-0.3
2,515,960	+		LRK54_RS11350	0.18	+2.3
2,515,960	+		LRK54_RS11350	0.18	-0.4
2,515,960	+		LRK54_RS11350	0.18	+0.7
2,515,960	+		LRK54_RS11350	0.18	-0.3
2,515,960	+		LRK54_RS11350	0.18	-0.8
2,515,960	+		LRK54_RS11350	0.18	-0.1
2,515,960	+		LRK54_RS11350	0.18	+0.2
2,515,960	+		LRK54_RS11350	0.18	-1.1
2,515,960	+		LRK54_RS11350	0.18	-1.1
2,515,961	-		LRK54_RS11350	0.18	-0.1
2,515,961	-		LRK54_RS11350	0.18	-0.2
2,515,961	-		LRK54_RS11350	0.18	-2.5
2,515,961	-		LRK54_RS11350	0.18	+1.6
2,515,961	-		LRK54_RS11350	0.18	+0.0
2,515,961	-		LRK54_RS11350	0.18	-0.8
2,515,961	-		LRK54_RS11350	0.18	+0.4
2,515,961	-		LRK54_RS11350	0.18	-0.6
2,515,961	-		LRK54_RS11350	0.18	-1.1
2,515,961	-		LRK54_RS11350	0.18	-0.0
2,515,961	-		LRK54_RS11350	0.18	+0.3
2,515,961	-		LRK54_RS11350	0.18	+0.1
2,515,961	-		LRK54_RS11350	0.18	-0.4
2,515,961	-		LRK54_RS11350	0.18	+0.3
2,515,961	-		LRK54_RS11350	0.18	-0.9
2,515,961	-		LRK54_RS11350	0.18	-0.3
2,515,961	-		LRK54_RS11350	0.18	+0.6
2,515,961	-		LRK54_RS11350	0.18	-0.6
2,515,961	-		LRK54_RS11350	0.18	-2.1
2,515,961	-		LRK54_RS11350	0.18	+0.8
2,515,961	-		LRK54_RS11350	0.18	-0.3
2,515,961	-		LRK54_RS11350	0.18	+1.7
2,515,961	-		LRK54_RS11350	0.18	-0.3
2,515,961	-		LRK54_RS11350	0.18	+0.4
2,515,961	-		LRK54_RS11350	0.18	-1.0
2,515,961	-		LRK54_RS11350	0.18	-0.4
2,515,961	-		LRK54_RS11350	0.18	+0.1
2,515,961	-		LRK54_RS11350	0.18	+0.7
2,515,961	-		LRK54_RS11350	0.18	-2.3
2,515,961	-		LRK54_RS11350	0.18	-0.1
2,515,961	-		LRK54_RS11350	0.18	-0.6
2,515,961	-		LRK54_RS11350	0.18	+0.5
2,515,961	-		LRK54_RS11350	0.18	+2.0
2,515,961	-		LRK54_RS11350	0.18	-0.5
2,515,961	-		LRK54_RS11350	0.18	+0.6
2,515,961	-		LRK54_RS11350	0.18	-0.8
2,515,961	-		LRK54_RS11350	0.18	-1.7
2,515,961	-		LRK54_RS11350	0.18	-1.8
2,515,961	-		LRK54_RS11350	0.18	+0.4
2,515,961	-		LRK54_RS11350	0.18	-0.8
2,515,961	-		LRK54_RS11350	0.18	-0.1
2,515,961	-		LRK54_RS11350	0.18	+1.2
2,515,961	-		LRK54_RS11350	0.18	-0.1
2,515,961	-		LRK54_RS11350	0.18	+2.3
2,515,961	-		LRK54_RS11350	0.18	-1.3
2,515,966	+		LRK54_RS11350	0.18	-0.5
2,515,966	+		LRK54_RS11350	0.18	+0.6
2,515,966	+		LRK54_RS11350	0.18	+1.1
2,515,966	+		LRK54_RS11350	0.18	+0.6
2,515,966	+		LRK54_RS11350	0.18	+0.2
2,515,966	+		LRK54_RS11350	0.18	+0.4
2,515,966	+		LRK54_RS11350	0.18	+2.7
2,515,966	+		LRK54_RS11350	0.18	-0.3
2,515,967	-		LRK54_RS11350	0.18	+0.4
2,515,967	-		LRK54_RS11350	0.18	+0.7
2,515,967	-		LRK54_RS11350	0.18	-1.1
2,515,967	-		LRK54_RS11350	0.18	+0.2
2,515,967	-		LRK54_RS11350	0.18	-0.3
2,515,967	-		LRK54_RS11350	0.18	+0.0
2,515,967	-		LRK54_RS11350	0.18	+0.7
2,516,032	+		LRK54_RS11350	0.23	+0.3
2,516,032	+		LRK54_RS11350	0.23	-0.8
2,516,032	+		LRK54_RS11350	0.23	-0.5
2,516,032	+		LRK54_RS11350	0.23	-0.8
2,516,032	+		LRK54_RS11350	0.23	+0.3
2,516,033	-		LRK54_RS11350	0.23	-0.4
2,516,033	-		LRK54_RS11350	0.23	-1.1
2,516,033	-		LRK54_RS11350	0.23	+0.4
2,516,033	-		LRK54_RS11350	0.23	-0.6
2,516,033	-		LRK54_RS11350	0.23	-0.3
2,516,074	+		LRK54_RS11350	0.26	-1.1
2,516,074	+		LRK54_RS11350	0.26	-0.3
2,516,074	+		LRK54_RS11350	0.26	+0.7
2,516,074	+		LRK54_RS11350	0.26	-0.6
2,516,074	+		LRK54_RS11350	0.26	-1.2
2,516,074	+		LRK54_RS11350	0.26	+1.7
2,516,074	+		LRK54_RS11350	0.26	-0.0
2,516,074	+		LRK54_RS11350	0.26	-0.2
2,516,074	+		LRK54_RS11350	0.26	-2.0
2,516,074	+		LRK54_RS11350	0.26	-1.0
2,516,074	+		LRK54_RS11350	0.26	-1.5
2,516,075	-		LRK54_RS11350	0.26	+0.3
2,516,075	-		LRK54_RS11350	0.26	+0.0
2,516,075	-		LRK54_RS11350	0.26	+0.2
2,516,075	-		LRK54_RS11350	0.26	-1.6
2,516,075	-		LRK54_RS11350	0.26	+0.4
2,516,075	-		LRK54_RS11350	0.26	+1.7
2,516,075	-		LRK54_RS11350	0.26	+0.4
2,516,075	-		LRK54_RS11350	0.26	+0.6
2,516,075	-		LRK54_RS11350	0.26	+0.4
2,516,110	+		LRK54_RS11350	0.29	+0.0
2,516,110	+		LRK54_RS11350	0.29	+0.3
2,516,110	+		LRK54_RS11350	0.29	+0.6
2,516,110	+		LRK54_RS11350	0.29	+0.7
2,516,110	+		LRK54_RS11350	0.29	-0.8
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