Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS06035

Experiment: R2A with sulfate 250 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with sulfate 250 mM
1,300,072	+				-0.3
1,300,072	+				-0.9
1,300,072	+				-1.7
1,300,072	+				-1.8
1,300,072	+				+0.2
1,300,072	+				-1.0
1,300,073	-				-0.9
1,300,073	-				-0.5
1,300,073	-				+1.8
1,300,073	-				+0.4
1,300,358	-		LRK54_RS06030	0.57	-0.4
1,300,417	+		LRK54_RS06030	0.68	+0.5
1,300,417	+		LRK54_RS06030	0.68	-0.0
1,300,418	-		LRK54_RS06030	0.68	-0.6
1,300,418	-		LRK54_RS06030	0.68	-1.9
1,300,418	-		LRK54_RS06030	0.68	-2.2
1,300,547	+				+1.8
1,300,555	+				-1.1
1,300,555	+				+0.9
1,300,555	+				-0.1
1,300,555	+				-0.0
1,300,556	-				+1.4
1,300,556	-				-0.8
1,300,677	+				+0.8
1,300,677	+				+1.1
1,300,677	+				+0.5
1,300,677	+				-0.3
1,300,677	+				+1.5
1,300,677	+				-0.5
1,300,677	+				+0.8
1,300,677	+				+1.0
1,300,677	+				-0.6
1,300,677	+				+1.8
1,300,678	-				+0.2
1,300,678	-				-0.2
1,300,678	-				-0.2
1,300,678	-				+0.7
1,300,678	-				-0.2
1,300,678	-				-1.7
1,300,678	-				-0.4
1,300,678	-				-0.5
1,300,678	-				+0.9
1,300,678	-				-0.0
1,300,842	+		LRK54_RS06035	0.24	+0.6
1,300,842	+		LRK54_RS06035	0.24	-0.8
1,300,842	+		LRK54_RS06035	0.24	+0.5
1,300,842	+		LRK54_RS06035	0.24	+0.4
1,300,843	-		LRK54_RS06035	0.24	+0.2
1,300,843	-		LRK54_RS06035	0.24	+1.2
1,300,843	-		LRK54_RS06035	0.24	+0.2
1,300,843	-		LRK54_RS06035	0.24	+0.6
1,300,843	-		LRK54_RS06035	0.24	-1.7
1,300,971	+		LRK54_RS06035	0.35	-0.4
1,300,971	+		LRK54_RS06035	0.35	-0.7
1,300,971	+		LRK54_RS06035	0.35	-0.2
1,300,971	+		LRK54_RS06035	0.35	-0.0
1,300,971	+		LRK54_RS06035	0.35	-1.0
1,300,972	-		LRK54_RS06035	0.35	+0.0
1,300,972	-		LRK54_RS06035	0.35	-0.7
1,300,972	-		LRK54_RS06035	0.35	+1.3
1,300,972	-		LRK54_RS06035	0.35	-0.2
1,300,972	-		LRK54_RS06035	0.35	-0.4
1,301,004	+		LRK54_RS06035	0.38	-0.1
1,301,075	+		LRK54_RS06035	0.44	+1.5
1,301,075	+		LRK54_RS06035	0.44	-2.7
1,301,075	+		LRK54_RS06035	0.44	-1.5
1,301,075	+		LRK54_RS06035	0.44	-0.3
1,301,076	-		LRK54_RS06035	0.44	-0.2
1,301,076	-		LRK54_RS06035	0.44	+0.6
1,301,076	-		LRK54_RS06035	0.44	-0.5
1,301,076	-		LRK54_RS06035	0.44	-0.2
1,301,076	-		LRK54_RS06035	0.44	-0.2
1,301,076	-		LRK54_RS06035	0.44	-0.2
1,301,076	-		LRK54_RS06035	0.44	+0.1
1,301,136	+		LRK54_RS06035	0.49	+0.9
1,301,136	+		LRK54_RS06035	0.49	-1.2
1,301,136	+		LRK54_RS06035	0.49	-1.0
1,301,137	-		LRK54_RS06035	0.50	-0.7
1,301,137	-		LRK54_RS06035	0.50	+0.5
1,301,137	-		LRK54_RS06035	0.50	+1.0
1,301,137	-		LRK54_RS06035	0.50	+0.3
1,301,145	+		LRK54_RS06035	0.50	-0.5
1,301,146	-		LRK54_RS06035	0.50	-1.5
1,301,146	-		LRK54_RS06035	0.50	-1.4
1,301,146	-		LRK54_RS06035	0.50	+0.0
1,301,175	+		LRK54_RS06035	0.53	+0.0
1,301,175	+		LRK54_RS06035	0.53	-2.0
1,301,175	+		LRK54_RS06035	0.53	+0.1
1,301,175	+		LRK54_RS06035	0.53	-0.5
1,301,175	+		LRK54_RS06035	0.53	+0.5
1,301,175	+		LRK54_RS06035	0.53	+0.5
1,301,176	-		LRK54_RS06035	0.53	-0.4
1,301,176	-		LRK54_RS06035	0.53	-0.5
1,301,176	-		LRK54_RS06035	0.53	-0.1
1,301,176	-		LRK54_RS06035	0.53	-0.5
1,301,176	-		LRK54_RS06035	0.53	-0.7
1,301,176	-		LRK54_RS06035	0.53	-0.2
1,301,176	-		LRK54_RS06035	0.53	+0.2
1,301,176	-		LRK54_RS06035	0.53	-0.0
1,301,176	-		LRK54_RS06035	0.53	-1.4
1,301,176	-		LRK54_RS06035	0.53	-2.7
1,301,176	-		LRK54_RS06035	0.53	-0.8
1,301,206	+		LRK54_RS06035	0.56	+0.5
1,301,206	+		LRK54_RS06035	0.56	+0.4
1,301,206	+		LRK54_RS06035	0.56	+1.5
1,301,206	+		LRK54_RS06035	0.56	+0.6
1,301,207	-		LRK54_RS06035	0.56	+1.6
1,301,207	-		LRK54_RS06035	0.56	+0.8
1,301,277	+		LRK54_RS06035	0.62	-1.2
1,301,277	+		LRK54_RS06035	0.62	-0.4
1,301,277	+		LRK54_RS06035	0.62	+0.8
1,301,277	+		LRK54_RS06035	0.62	-0.2
1,301,277	+		LRK54_RS06035	0.62	+0.1
1,301,277	+		LRK54_RS06035	0.62	+0.2
1,301,277	+		LRK54_RS06035	0.62	+2.5
1,301,277	+		LRK54_RS06035	0.62	+1.0
1,301,278	-		LRK54_RS06035	0.62	+0.6
1,301,278	-		LRK54_RS06035	0.62	-0.7
1,301,278	-		LRK54_RS06035	0.62	-0.9
1,301,278	-		LRK54_RS06035	0.62	-0.4
1,301,404	+		LRK54_RS06035	0.73	-1.5
1,301,404	+		LRK54_RS06035	0.73	-0.3
1,301,404	+		LRK54_RS06035	0.73	+0.1
1,301,404	+		LRK54_RS06035	0.73	-0.4
1,301,404	+		LRK54_RS06035	0.73	-0.3
1,301,405	-		LRK54_RS06035	0.73	+0.5
1,301,839	+		LRK54_RS06040	0.42	+0.6
1,301,839	+		LRK54_RS06040	0.42	+1.8
1,301,839	+		LRK54_RS06040	0.42	+0.7
1,301,840	-		LRK54_RS06040	0.43	+2.0
1,301,840	-		LRK54_RS06040	0.43	+0.5
1,301,840	-		LRK54_RS06040	0.43	-1.1
1,301,840	-		LRK54_RS06040	0.43	+1.4
1,301,938	+		LRK54_RS06040	0.73	-0.5
1,301,938	+		LRK54_RS06040	0.73	-0.0
1,301,938	+		LRK54_RS06040	0.73	-0.9
1,301,938	+		LRK54_RS06040	0.73	-0.9
1,301,938	+		LRK54_RS06040	0.73	-0.0
1,301,938	+		LRK54_RS06040	0.73	+0.1
1,301,939	-		LRK54_RS06040	0.74	-0.7
1,301,939	-		LRK54_RS06040	0.74	+3.6
1,301,939	-		LRK54_RS06040	0.74	-0.4
1,301,978	+		LRK54_RS06040	0.86	-0.4
1,301,978	+		LRK54_RS06040	0.86	+0.4
1,301,979	-		LRK54_RS06040	0.86	+0.8
1,301,979	-		LRK54_RS06040	0.86	-0.0
1,302,099	+		LRK54_RS06045	0.12	+0.5
1,302,099	+		LRK54_RS06045	0.12	-1.2
1,302,099	+		LRK54_RS06045	0.12	-0.7
1,302,099	+		LRK54_RS06045	0.12	+0.4
1,302,099	+		LRK54_RS06045	0.12	+1.6
1,302,099	+		LRK54_RS06045	0.12	+0.4
1,302,099	+		LRK54_RS06045	0.12	-0.3
1,302,100	-		LRK54_RS06045	0.12	-0.8
1,302,100	-		LRK54_RS06045	0.12	+0.5
1,302,100	-		LRK54_RS06045	0.12	-0.0
1,302,100	-		LRK54_RS06045	0.12	-0.9
1,302,100	-		LRK54_RS06045	0.12	-0.2
1,302,100	-		LRK54_RS06045	0.12	-1.0
1,302,100	-		LRK54_RS06045	0.12	+0.3
1,302,100	-		LRK54_RS06045	0.12	+0.6
1,302,100	-		LRK54_RS06045	0.12	+0.4
1,302,100	-		LRK54_RS06045	0.12	+3.4
1,302,100	-		LRK54_RS06045	0.12	-0.4
1,302,100	-		LRK54_RS06045	0.12	-0.5
1,302,363	+		LRK54_RS06045	0.52	+0.0
1,302,364	-		LRK54_RS06045	0.52	-0.7
1,302,582	+		LRK54_RS06045	0.85	+0.5
1,302,582	+		LRK54_RS06045	0.85	+1.3
1,302,582	+		LRK54_RS06045	0.85	+0.0
1,302,582	+		LRK54_RS06045	0.85	-1.7
1,302,582	+		LRK54_RS06045	0.85	+0.5
1,302,582	+		LRK54_RS06045	0.85	-1.1
1,302,582	+		LRK54_RS06045	0.85	+0.3
1,302,582	+		LRK54_RS06045	0.85	+0.4
1,302,582	+		LRK54_RS06045	0.85	+0.4
1,302,583	-		LRK54_RS06045	0.85	+0.2
1,302,583	-		LRK54_RS06045	0.85	+0.1
1,302,583	-		LRK54_RS06045	0.85	-0.5
1,302,583	-		LRK54_RS06045	0.85	+0.7
1,302,583	-		LRK54_RS06045	0.85	+0.3
1,302,583	-		LRK54_RS06045	0.85	-0.2
1,302,583	-		LRK54_RS06045	0.85	+0.2
1,302,583	-		LRK54_RS06045	0.85	+0.0