Experiment: Benzalkonium Chloride 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_4213 and Ga0059261_4214 are separated by 184 nucleotides Ga0059261_4214 and Ga0059261_4215 overlap by 4 nucleotides Ga0059261_4215 and Ga0059261_4216 are separated by 11 nucleotides
Ga0059261_4213: Ga0059261_4213 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148), at 4,367,928 to 4,368,779
_4213
Ga0059261_4214: Ga0059261_4214 - Enoyl-CoA hydratase/carnithine racemase, at 4,368,964 to 4,369,692
_4214
Ga0059261_4215: Ga0059261_4215 - Predicted N-formylglutamate amidohydrolase, at 4,369,689 to 4,370,420
_4215
Ga0059261_4216: Ga0059261_4216 - Dihydroxyacid dehydratase/phosphogluconate dehydratase, at 4,370,432 to 4,372,153
_4216
Position (kb)
4368
4369
4370 Strain fitness (log2 ratio)
-1
0
1
2 at 4368.812 kb on + strand at 4368.812 kb on + strand at 4368.813 kb on - strand at 4368.815 kb on - strand at 4368.865 kb on - strand at 4368.865 kb on - strand at 4369.007 kb on + strand at 4369.007 kb on + strand at 4369.008 kb on - strand at 4369.008 kb on - strand at 4369.008 kb on - strand at 4369.008 kb on - strand at 4369.293 kb on - strand, within Ga0059261_4214 at 4369.375 kb on + strand, within Ga0059261_4214 at 4369.375 kb on + strand, within Ga0059261_4214 at 4369.622 kb on + strand at 4369.622 kb on + strand at 4369.622 kb on + strand at 4369.622 kb on + strand at 4369.623 kb on - strand at 4369.683 kb on + strand at 4369.683 kb on + strand at 4369.706 kb on + strand at 4369.808 kb on + strand, within Ga0059261_4215 at 4369.808 kb on + strand, within Ga0059261_4215 at 4369.808 kb on + strand, within Ga0059261_4215 at 4369.808 kb on + strand, within Ga0059261_4215 at 4369.808 kb on + strand, within Ga0059261_4215 at 4369.808 kb on + strand, within Ga0059261_4215 at 4369.809 kb on - strand, within Ga0059261_4215 at 4369.809 kb on - strand, within Ga0059261_4215 at 4370.022 kb on + strand, within Ga0059261_4215 at 4370.022 kb on + strand, within Ga0059261_4215 at 4370.148 kb on + strand, within Ga0059261_4215 at 4370.148 kb on + strand, within Ga0059261_4215 at 4370.149 kb on - strand, within Ga0059261_4215 at 4370.149 kb on - strand, within Ga0059261_4215 at 4370.229 kb on + strand, within Ga0059261_4215 at 4370.283 kb on - strand, within Ga0059261_4215 at 4370.290 kb on - strand, within Ga0059261_4215 at 4370.368 kb on + strand at 4370.369 kb on - strand at 4370.418 kb on + strand at 4370.418 kb on + strand at 4370.419 kb on - strand at 4370.419 kb on - strand at 4370.510 kb on + strand at 4370.510 kb on + strand at 4370.510 kb on + strand at 4370.510 kb on + strand at 4370.510 kb on + strand at 4370.510 kb on + strand at 4370.510 kb on + strand at 4370.510 kb on + strand at 4370.510 kb on + strand at 4370.511 kb on - strand at 4370.511 kb on - strand at 4370.511 kb on - strand at 4370.511 kb on - strand at 4370.511 kb on - strand at 4370.511 kb on - strand at 4370.511 kb on - strand at 4370.511 kb on - strand at 4370.511 kb on - strand at 4370.511 kb on - strand at 4370.511 kb on - strand at 4370.513 kb on + strand at 4370.513 kb on + strand at 4370.513 kb on + strand at 4370.513 kb on + strand at 4370.513 kb on + strand at 4370.514 kb on - strand at 4370.514 kb on - strand at 4370.514 kb on - strand at 4370.514 kb on - strand at 4370.514 kb on - strand at 4370.516 kb on + strand at 4370.516 kb on + strand at 4370.516 kb on + strand at 4370.516 kb on + strand at 4370.516 kb on + strand at 4370.516 kb on + strand at 4370.516 kb on + strand at 4370.517 kb on - strand at 4370.517 kb on - strand at 4370.517 kb on - strand at 4370.517 kb on - strand at 4370.517 kb on - strand at 4370.517 kb on - strand at 4370.517 kb on - strand at 4370.517 kb on - strand at 4370.517 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.0005 mg/ml remove 4,368,812 + +0.6 4,368,812 + -0.2 4,368,813 - +0.1 4,368,815 - +0.8 4,368,865 - +0.7 4,368,865 - +0.4 4,369,007 + +0.1 4,369,007 + -0.6 4,369,008 - -0.4 4,369,008 - +0.1 4,369,008 - -0.9 4,369,008 - -0.0 4,369,293 - Ga0059261_4214 0.45 +0.0 4,369,375 + Ga0059261_4214 0.56 -0.1 4,369,375 + Ga0059261_4214 0.56 -0.7 4,369,622 + -0.6 4,369,622 + -0.4 4,369,622 + +0.0 4,369,622 + -1.3 4,369,623 - +2.2 4,369,683 + -0.0 4,369,683 + -0.5 4,369,706 + +0.1 4,369,808 + Ga0059261_4215 0.16 +0.4 4,369,808 + Ga0059261_4215 0.16 -0.5 4,369,808 + Ga0059261_4215 0.16 +0.9 4,369,808 + Ga0059261_4215 0.16 +0.1 4,369,808 + Ga0059261_4215 0.16 -0.2 4,369,808 + Ga0059261_4215 0.16 -0.1 4,369,809 - Ga0059261_4215 0.16 -0.4 4,369,809 - Ga0059261_4215 0.16 +0.4 4,370,022 + Ga0059261_4215 0.45 +0.2 4,370,022 + Ga0059261_4215 0.45 -0.3 4,370,148 + Ga0059261_4215 0.63 -0.4 4,370,148 + Ga0059261_4215 0.63 -0.6 4,370,149 - Ga0059261_4215 0.63 +0.9 4,370,149 - Ga0059261_4215 0.63 -0.2 4,370,229 + Ga0059261_4215 0.74 +0.7 4,370,283 - Ga0059261_4215 0.81 -0.2 4,370,290 - Ga0059261_4215 0.82 +0.4 4,370,368 + -0.0 4,370,369 - +0.2 4,370,418 + +0.4 4,370,418 + -0.1 4,370,419 - -0.6 4,370,419 - +0.3 4,370,510 + +0.2 4,370,510 + +0.2 4,370,510 + -0.7 4,370,510 + +0.2 4,370,510 + -0.0 4,370,510 + +0.4 4,370,510 + -0.6 4,370,510 + -0.1 4,370,510 + +1.1 4,370,511 - -0.5 4,370,511 - +1.1 4,370,511 - +0.7 4,370,511 - -0.1 4,370,511 - -0.6 4,370,511 - +0.4 4,370,511 - +0.5 4,370,511 - +1.0 4,370,511 - -0.2 4,370,511 - +0.2 4,370,511 - -0.3 4,370,513 + +0.1 4,370,513 + +0.1 4,370,513 + +0.4 4,370,513 + -0.4 4,370,513 + +0.0 4,370,514 - -0.6 4,370,514 - -0.4 4,370,514 - -0.8 4,370,514 - -0.2 4,370,514 - -0.6 4,370,516 + -0.7 4,370,516 + -1.7 4,370,516 + -1.3 4,370,516 + -0.6 4,370,516 + +1.4 4,370,516 + -0.6 4,370,516 + -0.4 4,370,517 - +0.4 4,370,517 - +0.4 4,370,517 - +1.4 4,370,517 - -1.1 4,370,517 - +0.0 4,370,517 - -0.3 4,370,517 - -0.4 4,370,517 - -1.3 4,370,517 - -0.3
Or see this region's nucleotide sequence