Experiment: Benzalkonium Chloride 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_4212 and Ga0059261_4213 overlap by 28 nucleotides Ga0059261_4213 and Ga0059261_4214 are separated by 184 nucleotides Ga0059261_4214 and Ga0059261_4215 overlap by 4 nucleotides
Ga0059261_4212: Ga0059261_4212 - TPR repeat, at 4,366,393 to 4,367,955
_4212
Ga0059261_4213: Ga0059261_4213 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148), at 4,367,928 to 4,368,779
_4213
Ga0059261_4214: Ga0059261_4214 - Enoyl-CoA hydratase/carnithine racemase, at 4,368,964 to 4,369,692
_4214
Ga0059261_4215: Ga0059261_4215 - Predicted N-formylglutamate amidohydrolase, at 4,369,689 to 4,370,420
_4215
Position (kb)
4367
4368
4369 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4366.962 kb on + strand, within Ga0059261_4212 at 4366.962 kb on + strand, within Ga0059261_4212 at 4367.218 kb on + strand, within Ga0059261_4212 at 4367.269 kb on + strand, within Ga0059261_4212 at 4367.269 kb on + strand, within Ga0059261_4212 at 4367.392 kb on + strand, within Ga0059261_4212 at 4367.599 kb on + strand, within Ga0059261_4212 at 4367.599 kb on + strand at 4367.608 kb on + strand, within Ga0059261_4212 at 4367.608 kb on + strand, within Ga0059261_4212 at 4367.608 kb on + strand, within Ga0059261_4212 at 4367.608 kb on + strand, within Ga0059261_4212 at 4367.719 kb on + strand, within Ga0059261_4212 at 4367.736 kb on + strand, within Ga0059261_4212 at 4367.821 kb on + strand at 4367.821 kb on + strand at 4367.821 kb on + strand at 4367.854 kb on + strand at 4367.854 kb on + strand at 4367.878 kb on + strand at 4368.812 kb on + strand at 4368.812 kb on + strand at 4368.813 kb on - strand at 4368.815 kb on - strand at 4368.865 kb on - strand at 4368.865 kb on - strand at 4369.007 kb on + strand at 4369.007 kb on + strand at 4369.008 kb on - strand at 4369.008 kb on - strand at 4369.008 kb on - strand at 4369.008 kb on - strand at 4369.293 kb on - strand, within Ga0059261_4214 at 4369.375 kb on + strand, within Ga0059261_4214 at 4369.375 kb on + strand, within Ga0059261_4214 at 4369.622 kb on + strand at 4369.622 kb on + strand at 4369.622 kb on + strand at 4369.622 kb on + strand at 4369.623 kb on - strand at 4369.683 kb on + strand at 4369.683 kb on + strand at 4369.706 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.0005 mg/ml remove 4,366,962 + Ga0059261_4212 0.36 -1.0 4,366,962 + Ga0059261_4212 0.36 -0.3 4,367,218 + Ga0059261_4212 0.53 -2.5 4,367,269 + Ga0059261_4212 0.56 -1.6 4,367,269 + Ga0059261_4212 0.56 -1.4 4,367,392 + Ga0059261_4212 0.64 -0.8 4,367,599 + Ga0059261_4212 0.77 -1.7 4,367,599 + -0.1 4,367,608 + Ga0059261_4212 0.78 +0.8 4,367,608 + Ga0059261_4212 0.78 -1.7 4,367,608 + Ga0059261_4212 0.78 -2.7 4,367,608 + Ga0059261_4212 0.78 -0.9 4,367,719 + Ga0059261_4212 0.85 -1.7 4,367,736 + Ga0059261_4212 0.86 -2.0 4,367,821 + -1.5 4,367,821 + -1.4 4,367,821 + -1.8 4,367,854 + -1.7 4,367,854 + -2.0 4,367,878 + -1.1 4,368,812 + +0.6 4,368,812 + -0.2 4,368,813 - +0.1 4,368,815 - +0.8 4,368,865 - +0.7 4,368,865 - +0.4 4,369,007 + +0.1 4,369,007 + -0.6 4,369,008 - -0.4 4,369,008 - +0.1 4,369,008 - -0.9 4,369,008 - -0.0 4,369,293 - Ga0059261_4214 0.45 +0.0 4,369,375 + Ga0059261_4214 0.56 -0.1 4,369,375 + Ga0059261_4214 0.56 -0.7 4,369,622 + -0.6 4,369,622 + -0.4 4,369,622 + +0.0 4,369,622 + -1.3 4,369,623 - +2.2 4,369,683 + -0.0 4,369,683 + -0.5 4,369,706 + +0.1
Or see this region's nucleotide sequence