Experiment: Benzalkonium Chloride 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3961 and Ga0059261_3962 overlap by 4 nucleotides Ga0059261_3962 and Ga0059261_3963 overlap by 4 nucleotides
Ga0059261_3961: Ga0059261_3961 - Urocanate hydratase (EC 4.2.1.49) (from data) , at 4,075,672 to 4,077,342
_3961
Ga0059261_3962: Ga0059261_3962 - N-formylglutamate deformylase (EC 3.5.1.68) (from data) , at 4,077,339 to 4,078,133
_3962
Ga0059261_3963: Ga0059261_3963 - Histidine ammonia-lyase (EC 4.3.1.3) (from data) , at 4,078,130 to 4,079,623
_3963
Position (kb)
4077
4078
4079 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4076.375 kb on + strand, within Ga0059261_3961 at 4076.522 kb on + strand, within Ga0059261_3961 at 4076.852 kb on + strand, within Ga0059261_3961 at 4076.852 kb on + strand, within Ga0059261_3961 at 4076.852 kb on + strand, within Ga0059261_3961 at 4076.852 kb on + strand, within Ga0059261_3961 at 4076.852 kb on + strand at 4076.853 kb on - strand, within Ga0059261_3961 at 4076.853 kb on - strand, within Ga0059261_3961 at 4076.885 kb on + strand, within Ga0059261_3961 at 4076.885 kb on + strand, within Ga0059261_3961 at 4076.885 kb on + strand, within Ga0059261_3961 at 4076.885 kb on + strand, within Ga0059261_3961 at 4076.886 kb on - strand, within Ga0059261_3961 at 4076.886 kb on - strand at 4076.886 kb on - strand, within Ga0059261_3961 at 4076.886 kb on - strand, within Ga0059261_3961 at 4076.918 kb on + strand, within Ga0059261_3961 at 4076.918 kb on + strand, within Ga0059261_3961 at 4076.918 kb on + strand, within Ga0059261_3961 at 4076.918 kb on + strand, within Ga0059261_3961 at 4076.918 kb on + strand, within Ga0059261_3961 at 4076.918 kb on + strand, within Ga0059261_3961 at 4076.918 kb on + strand at 4076.918 kb on + strand, within Ga0059261_3961 at 4076.918 kb on + strand, within Ga0059261_3961 at 4076.918 kb on + strand, within Ga0059261_3961 at 4076.918 kb on + strand, within Ga0059261_3961 at 4076.918 kb on + strand, within Ga0059261_3961 at 4076.918 kb on + strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.919 kb on - strand, within Ga0059261_3961 at 4076.948 kb on + strand, within Ga0059261_3961 at 4076.949 kb on - strand, within Ga0059261_3961 at 4076.949 kb on - strand, within Ga0059261_3961 at 4077.140 kb on + strand, within Ga0059261_3961 at 4077.140 kb on + strand, within Ga0059261_3961 at 4077.140 kb on + strand, within Ga0059261_3961 at 4077.140 kb on + strand, within Ga0059261_3961 at 4077.140 kb on + strand, within Ga0059261_3961 at 4077.140 kb on + strand at 4077.140 kb on + strand, within Ga0059261_3961 at 4077.140 kb on + strand, within Ga0059261_3961 at 4077.140 kb on + strand, within Ga0059261_3961 at 4077.140 kb on + strand, within Ga0059261_3961 at 4077.141 kb on - strand, within Ga0059261_3961 at 4077.141 kb on - strand, within Ga0059261_3961 at 4077.141 kb on - strand, within Ga0059261_3961 at 4077.179 kb on + strand at 4077.180 kb on - strand at 4077.310 kb on - strand at 4077.310 kb on - strand at 4077.310 kb on - strand at 4077.310 kb on - strand at 4077.310 kb on - strand at 4077.460 kb on + strand, within Ga0059261_3962 at 4077.460 kb on + strand, within Ga0059261_3962 at 4077.460 kb on + strand, within Ga0059261_3962 at 4077.460 kb on + strand, within Ga0059261_3962 at 4077.461 kb on - strand, within Ga0059261_3962 at 4077.461 kb on - strand, within Ga0059261_3962 at 4077.461 kb on - strand, within Ga0059261_3962 at 4077.461 kb on - strand, within Ga0059261_3962 at 4077.461 kb on - strand, within Ga0059261_3962 at 4077.461 kb on - strand, within Ga0059261_3962 at 4077.461 kb on - strand, within Ga0059261_3962 at 4077.461 kb on - strand, within Ga0059261_3962 at 4077.461 kb on - strand, within Ga0059261_3962 at 4077.517 kb on + strand, within Ga0059261_3962 at 4077.517 kb on + strand, within Ga0059261_3962 at 4077.517 kb on + strand, within Ga0059261_3962 at 4077.517 kb on + strand, within Ga0059261_3962 at 4077.517 kb on + strand, within Ga0059261_3962 at 4077.518 kb on - strand, within Ga0059261_3962 at 4077.518 kb on - strand, within Ga0059261_3962 at 4077.518 kb on - strand, within Ga0059261_3962 at 4077.518 kb on - strand, within Ga0059261_3962 at 4077.568 kb on + strand, within Ga0059261_3962 at 4077.709 kb on + strand, within Ga0059261_3962 at 4077.709 kb on + strand, within Ga0059261_3962 at 4077.709 kb on + strand, within Ga0059261_3962 at 4077.710 kb on - strand, within Ga0059261_3962 at 4077.710 kb on - strand, within Ga0059261_3962 at 4077.772 kb on + strand, within Ga0059261_3962 at 4077.773 kb on - strand, within Ga0059261_3962 at 4077.838 kb on + strand, within Ga0059261_3962 at 4077.838 kb on + strand, within Ga0059261_3962 at 4077.839 kb on - strand, within Ga0059261_3962 at 4077.898 kb on + strand, within Ga0059261_3962 at 4077.899 kb on - strand, within Ga0059261_3962 at 4077.899 kb on - strand, within Ga0059261_3962 at 4077.899 kb on - strand, within Ga0059261_3962 at 4077.899 kb on - strand, within Ga0059261_3962 at 4077.994 kb on + strand, within Ga0059261_3962 at 4077.994 kb on + strand, within Ga0059261_3962 at 4077.995 kb on - strand, within Ga0059261_3962 at 4078.009 kb on + strand, within Ga0059261_3962 at 4078.009 kb on + strand, within Ga0059261_3962 at 4078.009 kb on + strand, within Ga0059261_3962 at 4078.010 kb on - strand, within Ga0059261_3962 at 4078.010 kb on - strand, within Ga0059261_3962 at 4078.152 kb on + strand at 4078.152 kb on + strand at 4078.152 kb on + strand at 4078.153 kb on - strand at 4078.326 kb on + strand, within Ga0059261_3963 at 4078.326 kb on + strand, within Ga0059261_3963 at 4078.327 kb on - strand, within Ga0059261_3963 at 4078.812 kb on + strand, within Ga0059261_3963 at 4078.813 kb on - strand, within Ga0059261_3963 at 4078.813 kb on - strand, within Ga0059261_3963 at 4078.813 kb on - strand, within Ga0059261_3963 at 4078.813 kb on - strand, within Ga0059261_3963 at 4079.043 kb on + strand, within Ga0059261_3963 at 4079.043 kb on + strand, within Ga0059261_3963 at 4079.043 kb on + strand, within Ga0059261_3963 at 4079.043 kb on + strand, within Ga0059261_3963 at 4079.043 kb on + strand, within Ga0059261_3963 at 4079.043 kb on + strand, within Ga0059261_3963 at 4079.044 kb on - strand, within Ga0059261_3963 at 4079.044 kb on - strand, within Ga0059261_3963 at 4079.044 kb on - strand, within Ga0059261_3963 at 4079.044 kb on - strand, within Ga0059261_3963
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.0005 mg/ml remove 4,076,375 + Ga0059261_3961 0.42 -0.1 4,076,522 + Ga0059261_3961 0.51 +0.1 4,076,852 + Ga0059261_3961 0.71 -0.1 4,076,852 + Ga0059261_3961 0.71 -0.7 4,076,852 + Ga0059261_3961 0.71 -0.2 4,076,852 + Ga0059261_3961 0.71 +0.7 4,076,852 + -0.5 4,076,853 - Ga0059261_3961 0.71 -0.1 4,076,853 - Ga0059261_3961 0.71 -0.3 4,076,885 + Ga0059261_3961 0.73 -0.7 4,076,885 + Ga0059261_3961 0.73 -0.3 4,076,885 + Ga0059261_3961 0.73 +0.5 4,076,885 + Ga0059261_3961 0.73 -0.8 4,076,886 - Ga0059261_3961 0.73 -0.8 4,076,886 - -1.3 4,076,886 - Ga0059261_3961 0.73 -0.3 4,076,886 - Ga0059261_3961 0.73 -0.3 4,076,918 + Ga0059261_3961 0.75 -0.6 4,076,918 + Ga0059261_3961 0.75 -0.1 4,076,918 + Ga0059261_3961 0.75 -1.0 4,076,918 + Ga0059261_3961 0.75 +0.6 4,076,918 + Ga0059261_3961 0.75 +0.3 4,076,918 + Ga0059261_3961 0.75 +0.6 4,076,918 + -1.1 4,076,918 + Ga0059261_3961 0.75 -0.3 4,076,918 + Ga0059261_3961 0.75 -0.3 4,076,918 + Ga0059261_3961 0.75 +0.2 4,076,918 + Ga0059261_3961 0.75 +0.6 4,076,918 + Ga0059261_3961 0.75 +1.9 4,076,918 + Ga0059261_3961 0.75 +0.1 4,076,919 - Ga0059261_3961 0.75 -0.3 4,076,919 - Ga0059261_3961 0.75 +0.2 4,076,919 - Ga0059261_3961 0.75 +0.9 4,076,919 - Ga0059261_3961 0.75 -0.3 4,076,919 - Ga0059261_3961 0.75 -0.1 4,076,919 - Ga0059261_3961 0.75 -0.2 4,076,919 - Ga0059261_3961 0.75 -0.3 4,076,919 - Ga0059261_3961 0.75 -0.3 4,076,919 - Ga0059261_3961 0.75 -1.0 4,076,919 - Ga0059261_3961 0.75 +0.5 4,076,919 - Ga0059261_3961 0.75 -0.1 4,076,919 - Ga0059261_3961 0.75 -0.8 4,076,919 - Ga0059261_3961 0.75 +0.7 4,076,919 - Ga0059261_3961 0.75 +0.3 4,076,919 - Ga0059261_3961 0.75 -0.5 4,076,919 - Ga0059261_3961 0.75 +2.1 4,076,919 - Ga0059261_3961 0.75 -0.8 4,076,919 - Ga0059261_3961 0.75 -0.3 4,076,919 - Ga0059261_3961 0.75 -0.4 4,076,919 - Ga0059261_3961 0.75 -0.1 4,076,919 - Ga0059261_3961 0.75 -0.7 4,076,948 + Ga0059261_3961 0.76 -0.5 4,076,949 - Ga0059261_3961 0.76 -1.5 4,076,949 - Ga0059261_3961 0.76 -0.0 4,077,140 + Ga0059261_3961 0.88 -2.3 4,077,140 + Ga0059261_3961 0.88 -0.3 4,077,140 + Ga0059261_3961 0.88 -0.2 4,077,140 + Ga0059261_3961 0.88 -0.1 4,077,140 + Ga0059261_3961 0.88 +0.0 4,077,140 + -0.1 4,077,140 + Ga0059261_3961 0.88 -0.5 4,077,140 + Ga0059261_3961 0.88 +0.2 4,077,140 + Ga0059261_3961 0.88 -0.5 4,077,140 + Ga0059261_3961 0.88 -0.2 4,077,141 - Ga0059261_3961 0.88 -0.4 4,077,141 - Ga0059261_3961 0.88 +0.2 4,077,141 - Ga0059261_3961 0.88 -0.3 4,077,179 + +1.3 4,077,180 - -0.5 4,077,310 - -1.0 4,077,310 - -0.5 4,077,310 - -0.1 4,077,310 - +0.0 4,077,310 - -0.6 4,077,460 + Ga0059261_3962 0.15 +0.1 4,077,460 + Ga0059261_3962 0.15 +0.1 4,077,460 + Ga0059261_3962 0.15 -0.9 4,077,460 + Ga0059261_3962 0.15 +0.2 4,077,461 - Ga0059261_3962 0.15 -1.1 4,077,461 - Ga0059261_3962 0.15 -0.3 4,077,461 - Ga0059261_3962 0.15 +0.3 4,077,461 - Ga0059261_3962 0.15 -0.5 4,077,461 - Ga0059261_3962 0.15 -0.4 4,077,461 - Ga0059261_3962 0.15 -0.8 4,077,461 - Ga0059261_3962 0.15 +0.1 4,077,461 - Ga0059261_3962 0.15 +0.2 4,077,461 - Ga0059261_3962 0.15 -0.5 4,077,517 + Ga0059261_3962 0.22 -0.0 4,077,517 + Ga0059261_3962 0.22 +0.6 4,077,517 + Ga0059261_3962 0.22 +0.7 4,077,517 + Ga0059261_3962 0.22 -0.1 4,077,517 + Ga0059261_3962 0.22 -0.4 4,077,518 - Ga0059261_3962 0.23 -1.0 4,077,518 - Ga0059261_3962 0.23 -0.9 4,077,518 - Ga0059261_3962 0.23 -0.2 4,077,518 - Ga0059261_3962 0.23 -1.4 4,077,568 + Ga0059261_3962 0.29 -0.8 4,077,709 + Ga0059261_3962 0.47 -0.7 4,077,709 + Ga0059261_3962 0.47 +0.6 4,077,709 + Ga0059261_3962 0.47 -1.0 4,077,710 - Ga0059261_3962 0.47 -0.9 4,077,710 - Ga0059261_3962 0.47 +0.5 4,077,772 + Ga0059261_3962 0.54 -0.3 4,077,773 - Ga0059261_3962 0.55 +0.1 4,077,838 + Ga0059261_3962 0.63 +0.3 4,077,838 + Ga0059261_3962 0.63 -0.0 4,077,839 - Ga0059261_3962 0.63 +0.5 4,077,898 + Ga0059261_3962 0.70 -0.4 4,077,899 - Ga0059261_3962 0.70 -0.7 4,077,899 - Ga0059261_3962 0.70 -0.5 4,077,899 - Ga0059261_3962 0.70 -0.9 4,077,899 - Ga0059261_3962 0.70 +0.0 4,077,994 + Ga0059261_3962 0.82 -0.3 4,077,994 + Ga0059261_3962 0.82 +0.3 4,077,995 - Ga0059261_3962 0.83 -0.4 4,078,009 + Ga0059261_3962 0.84 -0.4 4,078,009 + Ga0059261_3962 0.84 +1.1 4,078,009 + Ga0059261_3962 0.84 -0.4 4,078,010 - Ga0059261_3962 0.84 +0.0 4,078,010 - Ga0059261_3962 0.84 -0.8 4,078,152 + +0.0 4,078,152 + -0.9 4,078,152 + -0.7 4,078,153 - -0.1 4,078,326 + Ga0059261_3963 0.13 -0.5 4,078,326 + Ga0059261_3963 0.13 -0.7 4,078,327 - Ga0059261_3963 0.13 -0.2 4,078,812 + Ga0059261_3963 0.46 -0.9 4,078,813 - Ga0059261_3963 0.46 -0.3 4,078,813 - Ga0059261_3963 0.46 +0.1 4,078,813 - Ga0059261_3963 0.46 -0.3 4,078,813 - Ga0059261_3963 0.46 +0.1 4,079,043 + Ga0059261_3963 0.61 +0.3 4,079,043 + Ga0059261_3963 0.61 +0.5 4,079,043 + Ga0059261_3963 0.61 -0.5 4,079,043 + Ga0059261_3963 0.61 -0.1 4,079,043 + Ga0059261_3963 0.61 -0.7 4,079,043 + Ga0059261_3963 0.61 -0.1 4,079,044 - Ga0059261_3963 0.61 -0.0 4,079,044 - Ga0059261_3963 0.61 +0.2 4,079,044 - Ga0059261_3963 0.61 +0.6 4,079,044 - Ga0059261_3963 0.61 -0.7
Or see this region's nucleotide sequence