Experiment: Benzalkonium Chloride 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3760 and Ga0059261_3761 are separated by 28 nucleotides Ga0059261_3761 and Ga0059261_3762 are separated by 7 nucleotides Ga0059261_3762 and Ga0059261_3763 are separated by 91 nucleotides Ga0059261_3763 and Ga0059261_3764 are separated by 9 nucleotides
Ga0059261_3760: Ga0059261_3760 - hypothetical protein, at 3,861,128 to 3,861,403
_3760
Ga0059261_3761: Ga0059261_3761 - hypothetical protein, at 3,861,432 to 3,862,337
_3761
Ga0059261_3762: Ga0059261_3762 - Uncharacterized conserved protein, at 3,862,345 to 3,862,812
_3762
Ga0059261_3763: Ga0059261_3763 - Esterase/lipase, at 3,862,904 to 3,863,764
_3763
Ga0059261_3764: Ga0059261_3764 - Bacterial lipocalin, at 3,863,774 to 3,864,334
_3764
Position (kb)
3862
3863 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3861.402 kb on - strand at 3861.402 kb on - strand at 3861.402 kb on - strand at 3861.402 kb on - strand at 3861.459 kb on + strand at 3861.459 kb on + strand at 3861.651 kb on + strand, within Ga0059261_3761 at 3861.651 kb on + strand, within Ga0059261_3761 at 3861.651 kb on + strand, within Ga0059261_3761 at 3861.651 kb on + strand, within Ga0059261_3761 at 3861.651 kb on + strand, within Ga0059261_3761 at 3861.652 kb on - strand, within Ga0059261_3761 at 3861.652 kb on - strand, within Ga0059261_3761 at 3861.756 kb on + strand, within Ga0059261_3761 at 3861.909 kb on + strand, within Ga0059261_3761 at 3861.909 kb on + strand, within Ga0059261_3761 at 3861.909 kb on + strand, within Ga0059261_3761 at 3861.909 kb on + strand, within Ga0059261_3761 at 3861.909 kb on + strand, within Ga0059261_3761 at 3861.909 kb on + strand, within Ga0059261_3761 at 3861.909 kb on + strand, within Ga0059261_3761 at 3861.910 kb on - strand, within Ga0059261_3761 at 3861.910 kb on - strand, within Ga0059261_3761 at 3861.910 kb on - strand, within Ga0059261_3761 at 3861.910 kb on - strand, within Ga0059261_3761 at 3861.910 kb on - strand, within Ga0059261_3761 at 3861.910 kb on - strand, within Ga0059261_3761 at 3861.910 kb on - strand, within Ga0059261_3761 at 3861.911 kb on + strand, within Ga0059261_3761 at 3861.911 kb on + strand, within Ga0059261_3761 at 3861.911 kb on + strand, within Ga0059261_3761 at 3861.911 kb on + strand, within Ga0059261_3761 at 3861.911 kb on + strand, within Ga0059261_3761 at 3861.911 kb on + strand, within Ga0059261_3761 at 3861.911 kb on + strand, within Ga0059261_3761 at 3861.912 kb on - strand, within Ga0059261_3761 at 3861.912 kb on - strand, within Ga0059261_3761 at 3861.912 kb on - strand, within Ga0059261_3761 at 3861.912 kb on - strand, within Ga0059261_3761 at 3861.912 kb on - strand, within Ga0059261_3761 at 3861.912 kb on - strand, within Ga0059261_3761 at 3861.912 kb on - strand, within Ga0059261_3761 at 3862.185 kb on + strand, within Ga0059261_3761 at 3862.185 kb on + strand, within Ga0059261_3761 at 3862.185 kb on + strand, within Ga0059261_3761 at 3862.186 kb on - strand, within Ga0059261_3761 at 3862.186 kb on - strand, within Ga0059261_3761 at 3862.257 kb on + strand at 3862.257 kb on + strand at 3862.257 kb on + strand at 3862.257 kb on + strand at 3862.257 kb on + strand at 3862.257 kb on + strand at 3862.257 kb on + strand at 3862.257 kb on + strand at 3862.257 kb on + strand at 3862.257 kb on + strand at 3862.258 kb on - strand at 3862.258 kb on - strand at 3862.258 kb on - strand at 3862.258 kb on - strand at 3862.258 kb on - strand at 3862.258 kb on - strand at 3862.258 kb on - strand at 3862.263 kb on + strand at 3862.264 kb on - strand at 3862.346 kb on + strand at 3862.347 kb on - strand at 3862.347 kb on - strand at 3862.559 kb on + strand, within Ga0059261_3762 at 3862.560 kb on - strand, within Ga0059261_3762 at 3862.560 kb on - strand, within Ga0059261_3762 at 3862.560 kb on - strand, within Ga0059261_3762 at 3862.560 kb on - strand, within Ga0059261_3762 at 3862.562 kb on + strand, within Ga0059261_3762 at 3862.562 kb on + strand, within Ga0059261_3762 at 3862.563 kb on - strand, within Ga0059261_3762 at 3862.563 kb on - strand, within Ga0059261_3762 at 3862.601 kb on - strand, within Ga0059261_3762 at 3862.834 kb on + strand at 3862.834 kb on + strand at 3862.834 kb on + strand at 3862.835 kb on - strand at 3862.835 kb on - strand at 3862.835 kb on - strand at 3862.870 kb on + strand at 3862.871 kb on - strand at 3862.871 kb on - strand at 3862.871 kb on - strand at 3863.186 kb on + strand, within Ga0059261_3763 at 3863.187 kb on - strand, within Ga0059261_3763 at 3863.357 kb on + strand, within Ga0059261_3763 at 3863.357 kb on + strand, within Ga0059261_3763 at 3863.357 kb on + strand, within Ga0059261_3763 at 3863.358 kb on - strand, within Ga0059261_3763 at 3863.358 kb on - strand, within Ga0059261_3763 at 3863.358 kb on - strand, within Ga0059261_3763 at 3863.358 kb on - strand, within Ga0059261_3763 at 3863.358 kb on - strand, within Ga0059261_3763 at 3863.423 kb on + strand, within Ga0059261_3763 at 3863.423 kb on + strand, within Ga0059261_3763 at 3863.423 kb on + strand, within Ga0059261_3763 at 3863.424 kb on - strand, within Ga0059261_3763 at 3863.474 kb on + strand, within Ga0059261_3763 at 3863.474 kb on + strand, within Ga0059261_3763 at 3863.474 kb on + strand, within Ga0059261_3763 at 3863.474 kb on + strand, within Ga0059261_3763 at 3863.474 kb on + strand, within Ga0059261_3763 at 3863.474 kb on + strand, within Ga0059261_3763 at 3863.475 kb on - strand, within Ga0059261_3763 at 3863.475 kb on - strand at 3863.475 kb on - strand, within Ga0059261_3763 at 3863.475 kb on - strand, within Ga0059261_3763 at 3863.475 kb on - strand, within Ga0059261_3763 at 3863.475 kb on - strand, within Ga0059261_3763 at 3863.476 kb on + strand, within Ga0059261_3763 at 3863.477 kb on - strand, within Ga0059261_3763 at 3863.683 kb on + strand at 3863.683 kb on + strand at 3863.683 kb on + strand at 3863.683 kb on + strand at 3863.717 kb on + strand at 3863.718 kb on - strand at 3863.811 kb on + strand at 3863.811 kb on + strand at 3863.812 kb on - strand at 3863.812 kb on - strand at 3863.812 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.0005 mg/ml remove 3,861,402 - -0.1 3,861,402 - -0.3 3,861,402 - -0.0 3,861,402 - -1.1 3,861,459 + -0.9 3,861,459 + +0.1 3,861,651 + Ga0059261_3761 0.24 -0.5 3,861,651 + Ga0059261_3761 0.24 -0.5 3,861,651 + Ga0059261_3761 0.24 -0.0 3,861,651 + Ga0059261_3761 0.24 +0.9 3,861,651 + Ga0059261_3761 0.24 +0.4 3,861,652 - Ga0059261_3761 0.24 +0.6 3,861,652 - Ga0059261_3761 0.24 -0.4 3,861,756 + Ga0059261_3761 0.36 +0.1 3,861,909 + Ga0059261_3761 0.53 -0.2 3,861,909 + Ga0059261_3761 0.53 -0.3 3,861,909 + Ga0059261_3761 0.53 +0.3 3,861,909 + Ga0059261_3761 0.53 -0.1 3,861,909 + Ga0059261_3761 0.53 +0.1 3,861,909 + Ga0059261_3761 0.53 -1.0 3,861,909 + Ga0059261_3761 0.53 -0.4 3,861,910 - Ga0059261_3761 0.53 -0.3 3,861,910 - Ga0059261_3761 0.53 -0.6 3,861,910 - Ga0059261_3761 0.53 +0.0 3,861,910 - Ga0059261_3761 0.53 +0.5 3,861,910 - Ga0059261_3761 0.53 -1.1 3,861,910 - Ga0059261_3761 0.53 +0.2 3,861,910 - Ga0059261_3761 0.53 +0.9 3,861,911 + Ga0059261_3761 0.53 +1.4 3,861,911 + Ga0059261_3761 0.53 +0.3 3,861,911 + Ga0059261_3761 0.53 +0.9 3,861,911 + Ga0059261_3761 0.53 -0.7 3,861,911 + Ga0059261_3761 0.53 -0.3 3,861,911 + Ga0059261_3761 0.53 +1.4 3,861,911 + Ga0059261_3761 0.53 +0.7 3,861,912 - Ga0059261_3761 0.53 +0.6 3,861,912 - Ga0059261_3761 0.53 +0.7 3,861,912 - Ga0059261_3761 0.53 -0.2 3,861,912 - Ga0059261_3761 0.53 -1.4 3,861,912 - Ga0059261_3761 0.53 -0.2 3,861,912 - Ga0059261_3761 0.53 +1.3 3,861,912 - Ga0059261_3761 0.53 -0.2 3,862,185 + Ga0059261_3761 0.83 +0.2 3,862,185 + Ga0059261_3761 0.83 -0.1 3,862,185 + Ga0059261_3761 0.83 -0.0 3,862,186 - Ga0059261_3761 0.83 -0.4 3,862,186 - Ga0059261_3761 0.83 -1.0 3,862,257 + -1.4 3,862,257 + +0.0 3,862,257 + +0.3 3,862,257 + +0.2 3,862,257 + +0.3 3,862,257 + -0.1 3,862,257 + +0.1 3,862,257 + +0.3 3,862,257 + +0.1 3,862,257 + +0.5 3,862,258 - -0.4 3,862,258 - +0.1 3,862,258 - +0.8 3,862,258 - -0.0 3,862,258 - +0.7 3,862,258 - -0.5 3,862,258 - -0.2 3,862,263 + -0.2 3,862,264 - +0.6 3,862,346 + +0.4 3,862,347 - +0.2 3,862,347 - -0.2 3,862,559 + Ga0059261_3762 0.46 -1.1 3,862,560 - Ga0059261_3762 0.46 +0.6 3,862,560 - Ga0059261_3762 0.46 -0.2 3,862,560 - Ga0059261_3762 0.46 +0.1 3,862,560 - Ga0059261_3762 0.46 +1.1 3,862,562 + Ga0059261_3762 0.46 +0.6 3,862,562 + Ga0059261_3762 0.46 -0.4 3,862,563 - Ga0059261_3762 0.47 +0.3 3,862,563 - Ga0059261_3762 0.47 +0.6 3,862,601 - Ga0059261_3762 0.55 -0.3 3,862,834 + +0.2 3,862,834 + +0.0 3,862,834 + -0.2 3,862,835 - -0.3 3,862,835 - +0.1 3,862,835 - -0.1 3,862,870 + +0.0 3,862,871 - -0.1 3,862,871 - +0.4 3,862,871 - +0.1 3,863,186 + Ga0059261_3763 0.33 -0.9 3,863,187 - Ga0059261_3763 0.33 -0.1 3,863,357 + Ga0059261_3763 0.53 -0.3 3,863,357 + Ga0059261_3763 0.53 -0.5 3,863,357 + Ga0059261_3763 0.53 +0.1 3,863,358 - Ga0059261_3763 0.53 +0.7 3,863,358 - Ga0059261_3763 0.53 -0.0 3,863,358 - Ga0059261_3763 0.53 +0.6 3,863,358 - Ga0059261_3763 0.53 -0.1 3,863,358 - Ga0059261_3763 0.53 -0.9 3,863,423 + Ga0059261_3763 0.60 +0.9 3,863,423 + Ga0059261_3763 0.60 +0.4 3,863,423 + Ga0059261_3763 0.60 -0.0 3,863,424 - Ga0059261_3763 0.60 -0.4 3,863,474 + Ga0059261_3763 0.66 +0.2 3,863,474 + Ga0059261_3763 0.66 +0.1 3,863,474 + Ga0059261_3763 0.66 +0.4 3,863,474 + Ga0059261_3763 0.66 +0.6 3,863,474 + Ga0059261_3763 0.66 +1.3 3,863,474 + Ga0059261_3763 0.66 +1.1 3,863,475 - Ga0059261_3763 0.66 +0.2 3,863,475 - +1.9 3,863,475 - Ga0059261_3763 0.66 -0.5 3,863,475 - Ga0059261_3763 0.66 -0.2 3,863,475 - Ga0059261_3763 0.66 +0.1 3,863,475 - Ga0059261_3763 0.66 -1.1 3,863,476 + Ga0059261_3763 0.66 -0.2 3,863,477 - Ga0059261_3763 0.67 -0.0 3,863,683 + +0.0 3,863,683 + -2.0 3,863,683 + +1.0 3,863,683 + -0.2 3,863,717 + +0.9 3,863,718 - -0.3 3,863,811 + +0.0 3,863,811 + +0.3 3,863,812 - -0.4 3,863,812 - -0.2 3,863,812 - -0.1
Or see this region's nucleotide sequence