Experiment: Benzalkonium Chloride 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0401 and Ga0059261_0402 are separated by 84 nucleotides Ga0059261_0402 and Ga0059261_0403 are separated by 390 nucleotides Ga0059261_0403 and Ga0059261_0404 are separated by 141 nucleotides Ga0059261_0404 and Ga0059261_0405 are separated by 25 nucleotides
Ga0059261_0401: Ga0059261_0401 - Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN, at 385,453 to 386,352
_0401
Ga0059261_0402: Ga0059261_0402 - Uncharacterized conserved protein, at 386,437 to 386,757
_0402
Ga0059261_0403: Ga0059261_0403 - Micrococcal nuclease (thermonuclease) homologs, at 387,148 to 387,606
_0403
Ga0059261_0404: Ga0059261_0404 - Ketosteroid isomerase homolog, at 387,748 to 388,176
_0404
Ga0059261_0405: Ga0059261_0405 - Uncharacterized conserved protein, at 388,202 to 388,660
_0405
Position (kb) 387
388 Strain fitness (log2 ratio) -2
-1
0
1 at 386.153 kb on + strand, within Ga0059261_0401 at 386.153 kb on + strand, within Ga0059261_0401 at 386.154 kb on - strand at 386.156 kb on + strand, within Ga0059261_0401 at 386.156 kb on + strand, within Ga0059261_0401 at 386.205 kb on - strand, within Ga0059261_0401 at 386.205 kb on - strand, within Ga0059261_0401 at 386.299 kb on - strand at 386.299 kb on - strand at 386.366 kb on + strand at 386.374 kb on + strand at 386.374 kb on + strand at 386.375 kb on - strand at 386.375 kb on - strand at 386.375 kb on - strand at 386.510 kb on + strand, within Ga0059261_0402 at 386.511 kb on - strand, within Ga0059261_0402 at 386.511 kb on - strand, within Ga0059261_0402 at 386.511 kb on - strand, within Ga0059261_0402 at 386.511 kb on - strand, within Ga0059261_0402 at 386.511 kb on - strand, within Ga0059261_0402 at 386.511 kb on - strand, within Ga0059261_0402 at 386.558 kb on + strand, within Ga0059261_0402 at 386.558 kb on + strand, within Ga0059261_0402 at 386.558 kb on + strand, within Ga0059261_0402 at 386.558 kb on + strand, within Ga0059261_0402 at 386.558 kb on + strand, within Ga0059261_0402 at 386.558 kb on + strand, within Ga0059261_0402 at 386.558 kb on + strand, within Ga0059261_0402 at 386.559 kb on - strand, within Ga0059261_0402 at 386.559 kb on - strand, within Ga0059261_0402 at 386.559 kb on - strand, within Ga0059261_0402 at 386.559 kb on - strand, within Ga0059261_0402 at 386.559 kb on - strand at 386.559 kb on - strand, within Ga0059261_0402 at 386.559 kb on - strand, within Ga0059261_0402 at 386.559 kb on - strand, within Ga0059261_0402 at 386.559 kb on - strand, within Ga0059261_0402 at 386.559 kb on - strand, within Ga0059261_0402 at 386.630 kb on + strand, within Ga0059261_0402 at 386.661 kb on + strand, within Ga0059261_0402 at 386.661 kb on + strand, within Ga0059261_0402 at 386.741 kb on + strand at 386.741 kb on + strand at 386.742 kb on - strand at 386.883 kb on + strand at 386.883 kb on + strand at 386.884 kb on - strand at 386.884 kb on - strand at 386.884 kb on - strand at 386.884 kb on - strand at 386.884 kb on - strand at 386.884 kb on - strand at 386.933 kb on + strand at 386.933 kb on + strand at 386.934 kb on - strand at 386.934 kb on - strand at 386.934 kb on - strand at 386.934 kb on - strand at 387.027 kb on + strand at 387.027 kb on + strand at 387.027 kb on + strand at 387.027 kb on + strand at 387.027 kb on + strand at 387.027 kb on + strand at 387.027 kb on + strand at 387.028 kb on - strand at 387.028 kb on - strand at 387.028 kb on - strand at 387.028 kb on - strand at 387.028 kb on - strand at 387.028 kb on - strand at 387.137 kb on - strand at 387.283 kb on + strand at 387.283 kb on + strand, within Ga0059261_0403 at 387.283 kb on + strand, within Ga0059261_0403 at 387.284 kb on - strand, within Ga0059261_0403 at 387.284 kb on - strand, within Ga0059261_0403 at 387.284 kb on - strand, within Ga0059261_0403 at 387.300 kb on + strand, within Ga0059261_0403 at 387.475 kb on + strand, within Ga0059261_0403 at 387.476 kb on - strand, within Ga0059261_0403 at 387.476 kb on - strand at 387.476 kb on - strand, within Ga0059261_0403 at 387.476 kb on - strand, within Ga0059261_0403 at 387.630 kb on + strand at 387.630 kb on + strand at 387.630 kb on + strand at 387.630 kb on + strand at 387.631 kb on - strand at 387.631 kb on - strand at 387.631 kb on - strand at 387.634 kb on + strand at 387.634 kb on + strand at 387.634 kb on + strand at 387.634 kb on + strand at 387.634 kb on + strand at 387.634 kb on + strand at 387.634 kb on + strand at 387.634 kb on + strand at 387.635 kb on - strand at 387.635 kb on - strand at 387.635 kb on - strand at 387.635 kb on - strand at 387.635 kb on - strand at 387.637 kb on - strand at 387.693 kb on + strand at 387.791 kb on + strand, within Ga0059261_0404 at 387.791 kb on + strand, within Ga0059261_0404 at 387.791 kb on + strand, within Ga0059261_0404 at 387.791 kb on + strand, within Ga0059261_0404 at 387.792 kb on - strand, within Ga0059261_0404 at 387.792 kb on - strand, within Ga0059261_0404 at 387.792 kb on - strand, within Ga0059261_0404 at 387.797 kb on + strand, within Ga0059261_0404 at 387.797 kb on + strand, within Ga0059261_0404 at 387.798 kb on - strand, within Ga0059261_0404 at 387.798 kb on - strand, within Ga0059261_0404 at 387.798 kb on - strand, within Ga0059261_0404 at 387.798 kb on - strand, within Ga0059261_0404 at 388.040 kb on + strand, within Ga0059261_0404 at 388.041 kb on - strand, within Ga0059261_0404 at 388.041 kb on - strand, within Ga0059261_0404 at 388.041 kb on - strand, within Ga0059261_0404 at 388.041 kb on - strand, within Ga0059261_0404 at 388.041 kb on - strand, within Ga0059261_0404 at 388.041 kb on - strand, within Ga0059261_0404 at 388.064 kb on + strand, within Ga0059261_0404 at 388.064 kb on + strand, within Ga0059261_0404 at 388.065 kb on - strand, within Ga0059261_0404 at 388.065 kb on - strand, within Ga0059261_0404 at 388.065 kb on - strand, within Ga0059261_0404 at 388.065 kb on - strand, within Ga0059261_0404 at 388.065 kb on - strand, within Ga0059261_0404 at 388.065 kb on - strand, within Ga0059261_0404 at 388.074 kb on + strand, within Ga0059261_0404 at 388.074 kb on + strand, within Ga0059261_0404 at 388.075 kb on - strand, within Ga0059261_0404 at 388.075 kb on - strand, within Ga0059261_0404 at 388.075 kb on - strand, within Ga0059261_0404 at 388.075 kb on - strand, within Ga0059261_0404 at 388.170 kb on + strand at 388.171 kb on - strand at 388.171 kb on - strand at 388.182 kb on + strand at 388.183 kb on - strand at 388.183 kb on - strand at 388.183 kb on - strand at 388.203 kb on + strand at 388.204 kb on - strand at 388.204 kb on - strand at 388.267 kb on + strand, within Ga0059261_0405 at 388.267 kb on + strand, within Ga0059261_0405 at 388.268 kb on - strand, within Ga0059261_0405 at 388.268 kb on - strand, within Ga0059261_0405 at 388.281 kb on + strand, within Ga0059261_0405 at 388.372 kb on + strand, within Ga0059261_0405 at 388.372 kb on + strand, within Ga0059261_0405 at 388.372 kb on + strand, within Ga0059261_0405 at 388.372 kb on + strand, within Ga0059261_0405 at 388.372 kb on + strand, within Ga0059261_0405 at 388.373 kb on - strand, within Ga0059261_0405 at 388.373 kb on - strand, within Ga0059261_0405 at 388.373 kb on - strand, within Ga0059261_0405 at 388.373 kb on - strand, within Ga0059261_0405 at 388.373 kb on - strand, within Ga0059261_0405 at 388.373 kb on - strand, within Ga0059261_0405
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.0005 mg/ml remove 386,153 + Ga0059261_0401 0.78 -0.6 386,153 + Ga0059261_0401 0.78 -0.1 386,154 - +0.4 386,156 + Ga0059261_0401 0.78 +0.2 386,156 + Ga0059261_0401 0.78 +0.2 386,205 - Ga0059261_0401 0.84 -0.4 386,205 - Ga0059261_0401 0.84 -0.0 386,299 - +0.4 386,299 - +0.2 386,366 + -0.2 386,374 + +0.1 386,374 + -0.4 386,375 - -0.0 386,375 - +1.2 386,375 - +0.4 386,510 + Ga0059261_0402 0.23 -0.1 386,511 - Ga0059261_0402 0.23 +0.4 386,511 - Ga0059261_0402 0.23 +0.0 386,511 - Ga0059261_0402 0.23 -0.6 386,511 - Ga0059261_0402 0.23 +0.3 386,511 - Ga0059261_0402 0.23 -0.4 386,511 - Ga0059261_0402 0.23 +0.0 386,558 + Ga0059261_0402 0.38 +0.0 386,558 + Ga0059261_0402 0.38 -0.3 386,558 + Ga0059261_0402 0.38 +0.5 386,558 + Ga0059261_0402 0.38 +0.0 386,558 + Ga0059261_0402 0.38 -0.0 386,558 + Ga0059261_0402 0.38 -0.1 386,558 + Ga0059261_0402 0.38 +0.0 386,559 - Ga0059261_0402 0.38 -0.3 386,559 - Ga0059261_0402 0.38 -0.2 386,559 - Ga0059261_0402 0.38 +1.0 386,559 - Ga0059261_0402 0.38 +0.4 386,559 - +0.4 386,559 - Ga0059261_0402 0.38 +0.1 386,559 - Ga0059261_0402 0.38 +1.1 386,559 - Ga0059261_0402 0.38 -0.3 386,559 - Ga0059261_0402 0.38 -0.1 386,559 - Ga0059261_0402 0.38 +0.8 386,630 + Ga0059261_0402 0.60 +0.1 386,661 + Ga0059261_0402 0.70 -0.3 386,661 + Ga0059261_0402 0.70 -0.0 386,741 + +0.1 386,741 + -0.3 386,742 - -0.2 386,883 + -0.2 386,883 + -0.2 386,884 - +0.0 386,884 - -0.6 386,884 - +0.8 386,884 - +0.8 386,884 - +0.0 386,884 - +0.7 386,933 + -0.0 386,933 + +1.0 386,934 - +1.0 386,934 - +0.3 386,934 - -0.1 386,934 - +0.2 387,027 + -0.2 387,027 + +0.6 387,027 + -0.3 387,027 + +0.2 387,027 + +0.1 387,027 + +0.1 387,027 + -1.1 387,028 - +0.1 387,028 - -0.1 387,028 - +0.2 387,028 - -1.5 387,028 - -0.4 387,028 - -1.7 387,137 - -1.1 387,283 + -0.2 387,283 + Ga0059261_0403 0.29 +0.4 387,283 + Ga0059261_0403 0.29 +0.8 387,284 - Ga0059261_0403 0.30 -0.6 387,284 - Ga0059261_0403 0.30 -0.0 387,284 - Ga0059261_0403 0.30 +0.5 387,300 + Ga0059261_0403 0.33 -0.3 387,475 + Ga0059261_0403 0.71 +0.2 387,476 - Ga0059261_0403 0.71 +1.1 387,476 - -1.6 387,476 - Ga0059261_0403 0.71 +0.3 387,476 - Ga0059261_0403 0.71 +0.0 387,630 + +0.5 387,630 + -0.5 387,630 + +0.0 387,630 + +0.4 387,631 - +0.5 387,631 - -0.4 387,631 - +0.7 387,634 + -0.6 387,634 + -0.6 387,634 + -0.0 387,634 + -0.8 387,634 + -0.1 387,634 + +0.5 387,634 + +0.8 387,634 + -0.1 387,635 - +0.3 387,635 - +0.4 387,635 - -0.2 387,635 - -0.1 387,635 - +0.6 387,637 - -0.8 387,693 + +0.6 387,791 + Ga0059261_0404 0.10 +0.3 387,791 + Ga0059261_0404 0.10 +0.4 387,791 + Ga0059261_0404 0.10 +0.4 387,791 + Ga0059261_0404 0.10 -0.1 387,792 - Ga0059261_0404 0.10 +0.6 387,792 - Ga0059261_0404 0.10 -0.4 387,792 - Ga0059261_0404 0.10 +0.1 387,797 + Ga0059261_0404 0.11 +0.5 387,797 + Ga0059261_0404 0.11 -0.9 387,798 - Ga0059261_0404 0.12 -0.2 387,798 - Ga0059261_0404 0.12 +0.7 387,798 - Ga0059261_0404 0.12 +0.6 387,798 - Ga0059261_0404 0.12 -0.7 388,040 + Ga0059261_0404 0.68 +0.3 388,041 - Ga0059261_0404 0.68 -0.8 388,041 - Ga0059261_0404 0.68 -0.1 388,041 - Ga0059261_0404 0.68 +1.2 388,041 - Ga0059261_0404 0.68 +0.6 388,041 - Ga0059261_0404 0.68 +0.5 388,041 - Ga0059261_0404 0.68 -0.1 388,064 + Ga0059261_0404 0.74 +0.1 388,064 + Ga0059261_0404 0.74 +0.4 388,065 - Ga0059261_0404 0.74 +0.7 388,065 - Ga0059261_0404 0.74 -2.3 388,065 - Ga0059261_0404 0.74 -0.8 388,065 - Ga0059261_0404 0.74 -0.5 388,065 - Ga0059261_0404 0.74 +0.6 388,065 - Ga0059261_0404 0.74 +1.0 388,074 + Ga0059261_0404 0.76 -0.3 388,074 + Ga0059261_0404 0.76 +0.1 388,075 - Ga0059261_0404 0.76 -0.4 388,075 - Ga0059261_0404 0.76 +0.1 388,075 - Ga0059261_0404 0.76 -1.4 388,075 - Ga0059261_0404 0.76 +0.6 388,170 + +0.3 388,171 - +1.1 388,171 - -0.6 388,182 + +0.1 388,183 - -0.3 388,183 - +1.0 388,183 - +1.0 388,203 + +0.6 388,204 - -0.4 388,204 - +0.4 388,267 + Ga0059261_0405 0.14 +0.1 388,267 + Ga0059261_0405 0.14 -0.7 388,268 - Ga0059261_0405 0.14 -0.3 388,268 - Ga0059261_0405 0.14 +0.8 388,281 + Ga0059261_0405 0.17 +1.2 388,372 + Ga0059261_0405 0.37 -0.1 388,372 + Ga0059261_0405 0.37 -0.0 388,372 + Ga0059261_0405 0.37 -1.1 388,372 + Ga0059261_0405 0.37 +0.5 388,372 + Ga0059261_0405 0.37 +0.2 388,373 - Ga0059261_0405 0.37 +0.4 388,373 - Ga0059261_0405 0.37 -0.1 388,373 - Ga0059261_0405 0.37 -0.0 388,373 - Ga0059261_0405 0.37 +0.5 388,373 - Ga0059261_0405 0.37 +0.4 388,373 - Ga0059261_0405 0.37 -0.4
Or see this region's nucleotide sequence