Experiment: syringaldehyde 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_20760 and AO356_20765 are separated by 100 nucleotides AO356_20765 and AO356_20770 are separated by 144 nucleotides AO356_20770 and AO356_20775 are separated by 128 nucleotides
AO356_20760: AO356_20760 - dienelactone hydrolase, at 4,627,186 to 4,628,241
_20760
AO356_20765: AO356_20765 - phytanoyl-CoA dioxygenase, at 4,628,342 to 4,629,019
_20765
AO356_20770: AO356_20770 - hypothetical protein, at 4,629,164 to 4,629,787
_20770
AO356_20775: AO356_20775 - short-chain dehydrogenase, at 4,629,916 to 4,630,194
_20775
Position (kb)
4628
4629
4630 Strain fitness (log2 ratio)
-2
-1
0
1 at 4627.350 kb on + strand, within AO356_20760 at 4627.351 kb on - strand, within AO356_20760 at 4627.351 kb on - strand, within AO356_20760 at 4627.351 kb on - strand, within AO356_20760 at 4627.351 kb on - strand, within AO356_20760 at 4627.351 kb on - strand, within AO356_20760 at 4627.351 kb on - strand, within AO356_20760 at 4627.351 kb on - strand, within AO356_20760 at 4627.472 kb on - strand, within AO356_20760 at 4627.570 kb on - strand, within AO356_20760 at 4627.578 kb on + strand, within AO356_20760 at 4627.660 kb on + strand, within AO356_20760 at 4627.853 kb on - strand, within AO356_20760 at 4627.853 kb on - strand, within AO356_20760 at 4627.853 kb on - strand, within AO356_20760 at 4627.875 kb on + strand, within AO356_20760 at 4627.922 kb on + strand, within AO356_20760 at 4627.922 kb on + strand, within AO356_20760 at 4627.922 kb on + strand, within AO356_20760 at 4627.922 kb on + strand, within AO356_20760 at 4627.971 kb on + strand, within AO356_20760 at 4627.979 kb on + strand, within AO356_20760 at 4628.294 kb on - strand at 4628.294 kb on - strand at 4628.451 kb on + strand, within AO356_20765 at 4628.451 kb on + strand, within AO356_20765 at 4628.452 kb on - strand, within AO356_20765 at 4628.452 kb on - strand, within AO356_20765 at 4628.452 kb on - strand, within AO356_20765 at 4628.558 kb on + strand, within AO356_20765 at 4628.559 kb on - strand, within AO356_20765 at 4628.559 kb on - strand, within AO356_20765 at 4628.559 kb on - strand, within AO356_20765 at 4628.868 kb on + strand, within AO356_20765 at 4628.936 kb on - strand, within AO356_20765 at 4628.936 kb on - strand, within AO356_20765 at 4628.985 kb on + strand at 4628.985 kb on + strand at 4629.050 kb on + strand at 4629.050 kb on + strand at 4629.050 kb on + strand at 4629.127 kb on + strand at 4629.127 kb on + strand at 4629.127 kb on + strand at 4629.127 kb on + strand at 4629.128 kb on - strand at 4629.128 kb on - strand at 4629.393 kb on - strand, within AO356_20770 at 4629.413 kb on - strand, within AO356_20770 at 4629.528 kb on - strand, within AO356_20770 at 4629.536 kb on + strand, within AO356_20770 at 4629.537 kb on - strand, within AO356_20770 at 4629.537 kb on - strand, within AO356_20770 at 4629.557 kb on + strand, within AO356_20770 at 4629.557 kb on + strand, within AO356_20770 at 4629.578 kb on + strand, within AO356_20770 at 4629.578 kb on + strand, within AO356_20770 at 4629.578 kb on + strand, within AO356_20770 at 4629.578 kb on + strand, within AO356_20770 at 4629.578 kb on + strand, within AO356_20770 at 4629.578 kb on + strand, within AO356_20770 at 4629.579 kb on - strand, within AO356_20770 at 4629.579 kb on - strand, within AO356_20770 at 4629.579 kb on - strand, within AO356_20770 at 4629.632 kb on + strand, within AO356_20770 at 4629.632 kb on + strand, within AO356_20770 at 4629.632 kb on + strand, within AO356_20770 at 4629.632 kb on + strand, within AO356_20770 at 4629.632 kb on + strand, within AO356_20770 at 4629.633 kb on - strand, within AO356_20770 at 4629.633 kb on - strand, within AO356_20770 at 4629.633 kb on - strand, within AO356_20770 at 4629.633 kb on - strand, within AO356_20770 at 4629.633 kb on - strand, within AO356_20770 at 4629.633 kb on - strand, within AO356_20770 at 4629.633 kb on - strand, within AO356_20770 at 4629.636 kb on + strand, within AO356_20770 at 4629.636 kb on + strand, within AO356_20770 at 4629.636 kb on + strand, within AO356_20770 at 4629.636 kb on + strand, within AO356_20770 at 4629.636 kb on + strand, within AO356_20770 at 4629.637 kb on - strand, within AO356_20770 at 4629.637 kb on - strand, within AO356_20770 at 4629.767 kb on + strand at 4629.767 kb on + strand at 4629.768 kb on - strand at 4629.768 kb on - strand at 4629.785 kb on + strand at 4629.785 kb on + strand at 4629.786 kb on - strand at 4629.917 kb on + strand at 4629.917 kb on + strand at 4629.917 kb on + strand at 4629.918 kb on - strand at 4629.918 kb on - strand at 4629.918 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 5 mM remove 4,627,350 + AO356_20760 0.16 -0.8 4,627,351 - AO356_20760 0.16 +0.1 4,627,351 - AO356_20760 0.16 +0.5 4,627,351 - AO356_20760 0.16 +0.3 4,627,351 - AO356_20760 0.16 +0.2 4,627,351 - AO356_20760 0.16 +1.1 4,627,351 - AO356_20760 0.16 -0.1 4,627,351 - AO356_20760 0.16 -0.4 4,627,472 - AO356_20760 0.27 +0.7 4,627,570 - AO356_20760 0.36 +0.3 4,627,578 + AO356_20760 0.37 -0.1 4,627,660 + AO356_20760 0.45 +0.9 4,627,853 - AO356_20760 0.63 -0.3 4,627,853 - AO356_20760 0.63 -0.3 4,627,853 - AO356_20760 0.63 +0.6 4,627,875 + AO356_20760 0.65 -0.2 4,627,922 + AO356_20760 0.70 +0.2 4,627,922 + AO356_20760 0.70 +0.2 4,627,922 + AO356_20760 0.70 +1.3 4,627,922 + AO356_20760 0.70 +0.5 4,627,971 + AO356_20760 0.74 -0.3 4,627,979 + AO356_20760 0.75 +0.9 4,628,294 - +0.4 4,628,294 - +0.2 4,628,451 + AO356_20765 0.16 +0.1 4,628,451 + AO356_20765 0.16 -0.0 4,628,452 - AO356_20765 0.16 +0.6 4,628,452 - AO356_20765 0.16 +0.7 4,628,452 - AO356_20765 0.16 -0.6 4,628,558 + AO356_20765 0.32 -0.1 4,628,559 - AO356_20765 0.32 +0.0 4,628,559 - AO356_20765 0.32 +0.2 4,628,559 - AO356_20765 0.32 -0.4 4,628,868 + AO356_20765 0.78 -0.7 4,628,936 - AO356_20765 0.88 +0.2 4,628,936 - AO356_20765 0.88 +0.3 4,628,985 + -0.2 4,628,985 + +0.7 4,629,050 + -0.5 4,629,050 + +0.5 4,629,050 + +0.5 4,629,127 + -0.2 4,629,127 + +0.3 4,629,127 + -0.4 4,629,127 + +1.0 4,629,128 - -0.4 4,629,128 - +0.2 4,629,393 - AO356_20770 0.37 -0.5 4,629,413 - AO356_20770 0.40 -0.2 4,629,528 - AO356_20770 0.58 +0.7 4,629,536 + AO356_20770 0.60 +0.4 4,629,537 - AO356_20770 0.60 -0.6 4,629,537 - AO356_20770 0.60 +0.4 4,629,557 + AO356_20770 0.63 -0.8 4,629,557 + AO356_20770 0.63 -0.2 4,629,578 + AO356_20770 0.66 -0.3 4,629,578 + AO356_20770 0.66 -1.3 4,629,578 + AO356_20770 0.66 -0.9 4,629,578 + AO356_20770 0.66 -1.1 4,629,578 + AO356_20770 0.66 -0.5 4,629,578 + AO356_20770 0.66 -0.3 4,629,579 - AO356_20770 0.67 -0.1 4,629,579 - AO356_20770 0.67 +0.9 4,629,579 - AO356_20770 0.67 -2.4 4,629,632 + AO356_20770 0.75 +1.1 4,629,632 + AO356_20770 0.75 -0.5 4,629,632 + AO356_20770 0.75 -0.0 4,629,632 + AO356_20770 0.75 +0.2 4,629,632 + AO356_20770 0.75 +0.1 4,629,633 - AO356_20770 0.75 +0.3 4,629,633 - AO356_20770 0.75 +0.3 4,629,633 - AO356_20770 0.75 -2.2 4,629,633 - AO356_20770 0.75 +0.1 4,629,633 - AO356_20770 0.75 +0.2 4,629,633 - AO356_20770 0.75 -1.3 4,629,633 - AO356_20770 0.75 -0.1 4,629,636 + AO356_20770 0.76 -0.2 4,629,636 + AO356_20770 0.76 -0.2 4,629,636 + AO356_20770 0.76 +0.1 4,629,636 + AO356_20770 0.76 -0.5 4,629,636 + AO356_20770 0.76 +1.3 4,629,637 - AO356_20770 0.76 -0.5 4,629,637 - AO356_20770 0.76 -0.2 4,629,767 + +0.7 4,629,767 + +0.1 4,629,768 - -1.3 4,629,768 - +0.5 4,629,785 + -0.3 4,629,785 + +0.3 4,629,786 - +0.3 4,629,917 + -0.5 4,629,917 + +0.7 4,629,917 + -0.6 4,629,918 - +0.5 4,629,918 - +0.6 4,629,918 - -0.3
Or see this region's nucleotide sequence