Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_17325

Experiment: syringaldehyde 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 5 mM
3,904,643	+		AO356_17320	0.21	+0.5
3,904,643	+		AO356_17320	0.21	+1.0
3,904,643	+		AO356_17320	0.21	+1.2
3,904,661	+		AO356_17320	0.23	+0.4
3,904,739	+		AO356_17320	0.33	+1.0
3,904,739	+		AO356_17320	0.33	+0.9
3,904,739	+		AO356_17320	0.33	+1.6
3,904,739	+		AO356_17320	0.33	+1.2
3,904,740	-		AO356_17320	0.33	-0.5
3,904,740	-		AO356_17320	0.33	+1.1
3,904,765	+		AO356_17320	0.36	+0.6
3,904,765	+		AO356_17320	0.36	+0.2
3,904,765	+		AO356_17320	0.36	+0.1
3,904,765	+		AO356_17320	0.36	+0.9
3,904,765	+		AO356_17320	0.36	+0.3
3,904,765	+		AO356_17320	0.36	+1.3
3,904,766	-		AO356_17320	0.36	-0.8
3,904,766	-		AO356_17320	0.36	+0.8
3,904,766	-		AO356_17320	0.36	-0.6
3,904,832	+		AO356_17320	0.45	+0.6
3,904,833	-		AO356_17320	0.45	-0.8
3,904,919	+		AO356_17320	0.56	+1.4
3,904,919	+		AO356_17320	0.56	+1.6
3,904,919	+		AO356_17320	0.56	-0.8
3,904,920	-		AO356_17320	0.56	+0.8
3,904,920	-		AO356_17320	0.56	+0.3
3,904,955	+		AO356_17320	0.61	-0.2
3,904,956	-		AO356_17320	0.61	-0.2
3,904,956	-		AO356_17320	0.61	+0.2
3,905,000	+		AO356_17320	0.66	-0.0
3,905,000	+		AO356_17320	0.66	+0.5
3,905,000	+		AO356_17320	0.66	+0.5
3,905,000	+		AO356_17320	0.66	+0.6
3,905,000	+		AO356_17320	0.66	+0.5
3,905,000	+		AO356_17320	0.66	+0.2
3,905,000	+		AO356_17320	0.66	+1.8
3,905,001	-		AO356_17320	0.66	+0.0
3,905,101	-		AO356_17320	0.79	+0.7
3,905,183	+		AO356_17320	0.90	-0.2
3,905,183	+		AO356_17320	0.90	+0.2
3,905,184	-		AO356_17320	0.90	-0.8
3,905,226	-				-0.1
3,905,331	+				-1.0
3,905,331	+				+0.2
3,905,331	+				+1.0
3,905,331	+				+0.1
3,905,332	-				-0.4
3,905,332	-				-0.1
3,905,332	-				+0.2
3,905,332	-				-0.4
3,905,332	-				+0.1
3,905,500	-				-0.1
3,905,500	-				+0.2
3,905,500	-				+1.0
3,905,762	+		AO356_17325	0.18	+0.6
3,905,762	+		AO356_17325	0.18	+0.1
3,905,763	-		AO356_17325	0.18	-0.0
3,905,763	-		AO356_17325	0.18	-0.3
3,905,786	-		AO356_17325	0.21	-0.0
3,905,841	-		AO356_17325	0.25	+1.0
3,905,841	-		AO356_17325	0.25	+1.6
3,905,841	-		AO356_17325	0.25	+0.8
3,905,841	-		AO356_17325	0.25	-1.5
3,905,841	-		AO356_17325	0.25	+0.1
3,905,885	+		AO356_17325	0.29	+0.2
3,905,951	+		AO356_17325	0.35	+0.3
3,905,951	+		AO356_17325	0.35	+0.5
3,905,951	+		AO356_17325	0.35	-0.1
3,905,951	+		AO356_17325	0.35	-0.2
3,905,952	-		AO356_17325	0.35	+0.1
3,905,952	-		AO356_17325	0.35	+0.6
3,905,952	-		AO356_17325	0.35	-0.3
3,905,952	-		AO356_17325	0.35	+0.6
3,905,952	-		AO356_17325	0.35	+0.2
3,905,954	+		AO356_17325	0.35	+0.1
3,905,954	+		AO356_17325	0.35	-0.0
3,905,954	+		AO356_17325	0.35	+1.5
3,905,954	+		AO356_17325	0.35	+0.3
3,905,954	+		AO356_17325	0.35	+1.2
3,905,955	-		AO356_17325	0.36	+0.5
3,905,955	-		AO356_17325	0.36	+0.7
3,905,955	-		AO356_17325	0.36	+0.8
3,905,955	-		AO356_17325	0.36	+1.0
3,906,167	+		AO356_17325	0.54	+0.3
3,906,167	+		AO356_17325	0.54	+0.1
3,906,167	+		AO356_17325	0.54	-0.6
3,906,168	-		AO356_17325	0.54	-0.9
3,906,168	-		AO356_17325	0.54	+0.5
3,906,266	+		AO356_17325	0.63	+0.3
3,906,266	+		AO356_17325	0.63	-0.2
3,906,266	+		AO356_17325	0.63	+0.6
3,906,266	+		AO356_17325	0.63	-0.5
3,906,266	+		AO356_17325	0.63	+0.8
3,906,266	+		AO356_17325	0.63	-0.4
3,906,266	+		AO356_17325	0.63	-0.6
3,906,267	-		AO356_17325	0.63	+0.4
3,906,267	-		AO356_17325	0.63	-0.2
3,906,267	-		AO356_17325	0.63	+1.1
3,906,267	-		AO356_17325	0.63	+0.3
3,906,267	-		AO356_17325	0.63	-0.5
3,906,267	-		AO356_17325	0.63	+2.0
3,906,386	+		AO356_17325	0.74	+0.9
3,906,386	+		AO356_17325	0.74	+2.5
3,906,386	+		AO356_17325	0.74	+0.4
3,906,386	+		AO356_17325	0.74	+0.9
3,906,387	-		AO356_17325	0.74	+0.8
3,906,387	-		AO356_17325	0.74	+1.2
3,906,387	-		AO356_17325	0.74	-0.0
3,906,472	-		AO356_17325	0.82	+0.9
3,906,853	+				-1.3
3,906,853	+				+0.7
3,906,853	+				+0.1
3,906,853	+				+0.8
3,906,854	-				+0.8
3,906,854	-				-0.3
3,906,954	+				+0.6
3,906,954	+				+0.5
3,906,980	+				-0.6
3,906,981	-				+0.3
3,907,003	+				+1.5
3,907,003	+				+0.7
3,907,003	+				-0.8
3,907,003	+				+2.1
3,907,003	+				+0.6
3,907,004	-				+1.2
3,907,004	-				-0.1
3,907,004	-				-0.9
3,907,004	-				+0.7
3,907,004	-				+0.6
3,907,004	-				+0.4
3,907,004	-				-0.1
3,907,004	-				-0.2
3,907,016	-				+0.1
3,907,033	+				+0.6
3,907,034	-				+0.3
3,907,034	-				+0.4
3,907,061	+				-0.4
3,907,061	+				-0.2
3,907,061	+				+1.6
3,907,061	+				-0.0
3,907,061	+				-0.1
3,907,061	+				+0.4
3,907,061	+				+0.8
3,907,062	-				-0.4
3,907,062	-				+0.1
3,907,065	+				+1.1
3,907,065	+				+0.1
3,907,065	+				+1.4
3,907,065	+				-0.1
3,907,065	+				-2.0
3,907,066	-				-0.9
3,907,066	-				+0.9
3,907,080	+				-1.4
3,907,080	+				-0.6
3,907,080	+				+0.8
3,907,080	+				+0.6
3,907,080	+				+0.4
3,907,080	+				-0.2
3,907,080	+				+0.3
3,907,081	-				+0.7
3,907,081	-				-0.4
3,907,081	-				-0.4
3,907,081	-				+0.0
3,907,081	-				-0.2
3,907,081	-				-0.3
3,907,081	-				-0.4
3,907,493	+		AO356_17330	0.34	+0.1
3,907,493	+		AO356_17330	0.34	+0.2
3,907,493	+		AO356_17330	0.34	+1.2
3,907,493	+		AO356_17330	0.34	+1.1
3,907,494	-		AO356_17330	0.34	+0.6
3,907,494	-		AO356_17330	0.34	+1.1