Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04880

Experiment: syringaldehyde 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 5 mM
1,095,077	+		AO356_04875	0.17	-0.7
1,095,077	+		AO356_04875	0.17	-3.0
1,095,078	-		AO356_04875	0.17	-3.9
1,095,155	-		AO356_04875	0.23	-3.0
1,095,175	+		AO356_04875	0.25	-0.6
1,095,176	-		AO356_04875	0.25	-1.9
1,095,239	-		AO356_04875	0.31	-3.4
1,095,280	+		AO356_04875	0.34	-2.3
1,095,280	+		AO356_04875	0.34	-1.3
1,095,281	-		AO356_04875	0.34	-2.4
1,095,281	-		AO356_04875	0.34	-1.3
1,095,281	-		AO356_04875	0.34	-1.7
1,095,281	-		AO356_04875	0.34	-1.0
1,095,350	-		AO356_04875	0.40	-0.9
1,095,362	-		AO356_04875	0.41	-0.7
1,095,362	-		AO356_04875	0.41	-1.4
1,095,362	-		AO356_04875	0.41	-0.9
1,095,469	+		AO356_04875	0.51	-1.1
1,095,469	+		AO356_04875	0.51	-0.2
1,095,469	+		AO356_04875	0.51	-1.5
1,095,469	+		AO356_04875	0.51	-2.1
1,095,469	+		AO356_04875	0.51	-0.5
1,095,469	+		AO356_04875	0.51	-0.4
1,095,470	-		AO356_04875	0.51	-2.5
1,095,470	-		AO356_04875	0.51	-1.0
1,095,470	-		AO356_04875	0.51	-3.5
1,095,672	-		AO356_04875	0.68	-2.1
1,095,977	+				-0.3
1,096,039	+				+0.1
1,096,039	+				-0.1
1,096,040	-				-2.2
1,096,273	+				-1.0
1,096,273	+				-0.3
1,096,274	-				-1.8
1,096,274	-				-1.3
1,096,274	-				-1.5
1,096,274	-				-0.9
1,096,274	-				-0.6
1,096,274	-				-1.1
1,096,513	+		AO356_04880	0.15	-1.5
1,096,513	+		AO356_04880	0.15	-1.2
1,096,513	+		AO356_04880	0.15	-2.3
1,096,514	-		AO356_04880	0.15	-1.5
1,096,514	-		AO356_04880	0.15	-0.2
1,096,514	-		AO356_04880	0.15	-1.8
1,096,514	-		AO356_04880	0.15	-0.8
1,096,589	-		AO356_04880	0.17	-0.9
1,096,867	+		AO356_04880	0.26	-0.9
1,096,867	+		AO356_04880	0.26	-1.8
1,096,868	-		AO356_04880	0.26	-1.9
1,096,868	-		AO356_04880	0.26	-1.4
1,097,169	-		AO356_04880	0.36	-2.4
1,097,211	+		AO356_04880	0.37	-2.4
1,097,211	+		AO356_04880	0.37	-1.0
1,097,443	+		AO356_04880	0.44	-2.2
1,097,443	+		AO356_04880	0.44	-1.5
1,097,444	-		AO356_04880	0.44	-2.2
1,097,444	-		AO356_04880	0.44	-2.2
1,097,444	-		AO356_04880	0.44	-1.9
1,097,444	-		AO356_04880	0.44	-0.8
1,097,444	-		AO356_04880	0.44	-0.8
1,097,623	+		AO356_04880	0.50	-1.9
1,097,623	+		AO356_04880	0.50	-2.0
1,097,623	+		AO356_04880	0.50	-2.9
1,097,624	-		AO356_04880	0.50	-1.9
1,097,624	-		AO356_04880	0.50	-1.9
1,097,666	-		AO356_04880	0.51	-1.8
1,097,771	+		AO356_04880	0.55	-1.6
1,097,772	-		AO356_04880	0.55	-2.1
1,098,200	+		AO356_04880	0.68	-4.5
1,098,200	+		AO356_04880	0.68	-0.1
1,098,200	+		AO356_04880	0.68	+0.6
1,098,232	+		AO356_04880	0.69	-0.9
1,098,232	+		AO356_04880	0.69	-1.4
1,098,232	+		AO356_04880	0.69	-2.2
1,098,233	-		AO356_04880	0.69	-1.9
1,098,233	-		AO356_04880	0.69	-1.3
1,098,321	+		AO356_04880	0.72	-0.7
1,098,321	+		AO356_04880	0.72	+0.0
1,098,321	+		AO356_04880	0.72	-1.5
1,098,322	-		AO356_04880	0.72	-2.0
1,098,322	-		AO356_04880	0.72	-1.1
1,098,322	-		AO356_04880	0.72	-3.2
1,098,325	+		AO356_04880	0.72	-1.6
1,098,325	+		AO356_04880	0.72	-2.1
1,098,325	+		AO356_04880	0.72	-2.5
1,098,325	+		AO356_04880	0.72	-1.5
1,098,325	+		AO356_04880	0.72	-1.7
1,098,325	+		AO356_04880	0.72	-2.6
1,098,326	-		AO356_04880	0.72	-0.9
1,098,326	-		AO356_04880	0.72	-0.6
1,098,326	-		AO356_04880	0.72	-1.0
1,098,326	-		AO356_04880	0.72	-1.2
1,098,326	-		AO356_04880	0.72	-0.5
1,098,326	-		AO356_04880	0.72	-1.8
1,098,326	-		AO356_04880	0.72	-2.1
1,098,367	+		AO356_04880	0.73	-1.3
1,098,367	+		AO356_04880	0.73	-2.5
1,098,367	+		AO356_04880	0.73	-1.3
1,098,368	-		AO356_04880	0.73	+0.4
1,098,368	-		AO356_04880	0.73	-0.8
1,098,421	+		AO356_04880	0.75	-1.2
1,098,422	-		AO356_04880	0.75	-2.3
1,098,422	-		AO356_04880	0.75	-3.1
1,098,484	+		AO356_04880	0.77	-0.8
1,098,484	+		AO356_04880	0.77	-1.1
1,098,485	-		AO356_04880	0.77	-1.0
1,098,485	-		AO356_04880	0.77	-1.1
1,098,508	+		AO356_04880	0.78	-2.7
1,098,508	+		AO356_04880	0.78	-0.9
1,098,509	-		AO356_04880	0.78	-0.8
1,098,509	-		AO356_04880	0.78	-1.3
1,098,643	+		AO356_04880	0.82	-2.2
1,098,643	+		AO356_04880	0.82	-0.9
1,098,643	+		AO356_04880	0.82	-0.3
1,098,644	-		AO356_04880	0.82	-0.2
1,098,682	+		AO356_04880	0.83	-1.1
1,098,682	+		AO356_04880	0.83	-0.3
1,098,682	+		AO356_04880	0.83	-1.3
1,098,682	+		AO356_04880	0.83	-1.0
1,098,682	+		AO356_04880	0.83	-2.1
1,098,683	-		AO356_04880	0.83	-2.9
1,098,683	-		AO356_04880	0.83	-1.3
1,098,683	-		AO356_04880	0.83	-1.6
1,098,683	-		AO356_04880	0.83	-1.9
1,098,683	-		AO356_04880	0.83	-2.2
1,098,727	+		AO356_04880	0.85	-1.2
1,098,829	+		AO356_04880	0.88	-0.1
1,098,829	+		AO356_04880	0.88	-0.8
1,098,829	+		AO356_04880	0.88	-1.3
1,098,829	+		AO356_04880	0.88	-0.8
1,098,830	-		AO356_04880	0.88	-1.6
1,098,830	-		AO356_04880	0.88	-0.5
1,098,830	-		AO356_04880	0.88	-1.8
1,098,830	-		AO356_04880	0.88	-1.2
1,098,954	+				-1.2
1,098,954	+				-1.3
1,098,955	-				-1.1
1,098,975	+				-1.0
1,099,093	-				-1.7
1,099,146	-				-1.7
1,099,177	-				-3.1
1,099,191	+				-1.5
1,099,275	+				-1.9
1,099,275	+				-2.3
1,099,597	-		AO356_04885	0.27	-1.4
1,099,746	+		AO356_04885	0.37	-0.2
1,099,746	+		AO356_04885	0.37	-2.4
1,099,746	+		AO356_04885	0.37	-3.2
1,099,747	-		AO356_04885	0.37	-2.3
1,099,747	-		AO356_04885	0.37	-2.3