Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04615

Experiment: syringaldehyde 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 5 mM
1,038,246	-		AO356_04610	0.37	+0.5
1,038,269	-		AO356_04610	0.40	-0.6
1,038,310	-		AO356_04610	0.47	-1.7
1,038,376	+		AO356_04610	0.56	-0.5
1,038,376	+		AO356_04610	0.56	+0.3
1,038,377	-		AO356_04610	0.57	-0.4
1,038,536	-		AO356_04610	0.80	+0.1
1,038,536	-		AO356_04610	0.80	-0.6
1,038,536	-		AO356_04610	0.80	-0.3
1,038,579	+		AO356_04610	0.87	-1.1
1,038,673	+				-0.2
1,038,673	+				-0.4
1,038,673	+				-1.0
1,038,720	+				+0.8
1,038,720	+				+0.6
1,038,795	+				-0.5
1,038,795	+				+1.3
1,038,795	+				+0.1
1,038,795	+				-0.2
1,038,795	+				+0.2
1,038,795	+				-0.5
1,038,795	+				-0.3
1,038,795	+				-0.8
1,038,795	+				+0.8
1,038,796	-				+0.5
1,038,796	-				-1.8
1,038,796	-				+0.2
1,038,796	-				-0.0
1,038,796	-				+1.2
1,038,877	+				+0.1
1,038,877	+				+0.2
1,038,877	+				+0.6
1,038,878	-				+1.2
1,038,878	-				-0.2
1,038,878	-				+0.1
1,038,886	+				-1.1
1,038,886	+				-0.1
1,038,887	-				-0.4
1,038,887	-				+0.4
1,038,916	-				-0.5
1,039,005	+				+0.1
1,039,006	-				-0.9
1,039,133	+				+0.9
1,039,133	+				+1.0
1,039,134	-				-0.6
1,039,134	-				+0.6
1,039,134	-				-0.2
1,039,134	-				+0.2
1,039,134	-				-0.8
1,039,143	+				-0.4
1,039,143	+				+0.3
1,039,143	+				-0.4
1,039,144	-				-0.8
1,039,144	-				+0.2
1,039,148	+				-0.9
1,039,149	-				+1.2
1,039,333	+		AO356_04615	0.21	+0.3
1,039,333	+		AO356_04615	0.21	-1.2
1,039,333	+		AO356_04615	0.21	-0.9
1,039,333	+		AO356_04615	0.21	-0.0
1,039,333	+		AO356_04615	0.21	-0.1
1,039,333	+		AO356_04615	0.21	+0.2
1,039,333	+		AO356_04615	0.21	+0.3
1,039,334	-		AO356_04615	0.21	+0.1
1,039,334	-		AO356_04615	0.21	+0.1
1,039,334	-		AO356_04615	0.21	-0.2
1,039,334	-		AO356_04615	0.21	+0.5
1,039,334	-		AO356_04615	0.21	-0.2
1,039,334	-		AO356_04615	0.21	-0.7
1,039,363	+		AO356_04615	0.24	-0.2
1,039,363	+		AO356_04615	0.24	-0.7
1,039,363	+		AO356_04615	0.24	-0.8
1,039,363	+		AO356_04615	0.24	-0.2
1,039,363	+		AO356_04615	0.24	-0.2
1,039,363	+		AO356_04615	0.24	+0.2
1,039,364	-		AO356_04615	0.24	+0.4
1,039,364	-		AO356_04615	0.24	+0.2
1,039,364	-		AO356_04615	0.24	-0.3
1,039,364	-		AO356_04615	0.24	+0.6
1,039,364	-		AO356_04615	0.24	+0.2
1,039,364	-		AO356_04615	0.24	+0.5
1,039,507	+		AO356_04615	0.38	+0.6
1,039,507	+		AO356_04615	0.38	+0.9
1,039,507	+		AO356_04615	0.38	-0.3
1,039,507	+		AO356_04615	0.38	+1.0
1,039,507	+		AO356_04615	0.38	+1.6
1,039,508	-		AO356_04615	0.38	+1.0
1,039,508	-		AO356_04615	0.38	+0.1
1,039,540	+		AO356_04615	0.42	-0.5
1,039,541	-		AO356_04615	0.42	-0.3
1,039,687	+		AO356_04615	0.56	+0.6
1,039,687	+		AO356_04615	0.56	-0.4
1,039,688	-		AO356_04615	0.57	-0.5
1,039,692	-		AO356_04615	0.57	+0.3
1,039,879	+		AO356_04615	0.76	+1.7
1,039,879	+		AO356_04615	0.76	-0.2
1,039,879	+		AO356_04615	0.76	+0.1
1,039,880	-		AO356_04615	0.76	+0.9
1,039,880	-		AO356_04615	0.76	+0.0
1,039,880	-		AO356_04615	0.76	+1.0
1,039,880	-		AO356_04615	0.76	+0.3
1,039,913	-		AO356_04615	0.79	+0.5
1,039,942	+		AO356_04615	0.82	+0.3
1,039,942	+		AO356_04615	0.82	+1.0
1,039,942	+		AO356_04615	0.82	-0.3
1,039,942	+		AO356_04615	0.82	-0.6
1,039,943	-		AO356_04615	0.82	-0.7
1,039,943	-		AO356_04615	0.82	+0.4
1,040,056	+				+0.2
1,040,056	+				-0.7
1,040,056	+				+0.7
1,040,056	+				-1.8
1,040,057	-				+0.5
1,040,057	-				+0.3
1,040,057	-				-0.1
1,040,057	-				-1.4
1,040,057	-				-0.4
1,040,080	+				+0.9
1,040,080	+				+1.2
1,040,080	+				+1.3
1,040,080	+				+0.2
1,040,081	-				+0.6
1,040,081	-				+0.0
1,040,081	-				-0.6
1,040,081	-				-2.3
1,040,081	-				-1.7
1,040,169	+				-0.1
1,040,169	+				-0.7
1,040,169	+				-1.3
1,040,169	+				-0.1
1,040,170	-				+1.0
1,040,170	-				+0.6
1,040,170	-				+0.1
1,040,170	-				+0.3
1,040,191	+				+0.3
1,040,191	+				+0.5
1,040,333	+		AO356_04620	0.34	-0.5
1,040,333	+		AO356_04620	0.34	+0.2
1,040,333	+		AO356_04620	0.34	-0.1
1,040,333	+		AO356_04620	0.34	-0.2
1,040,333	+		AO356_04620	0.34	+0.2
1,040,334	-		AO356_04620	0.35	+0.2
1,040,334	-		AO356_04620	0.35	-0.4
1,040,334	-		AO356_04620	0.35	+0.7
1,040,334	-		AO356_04620	0.35	-1.3
1,040,334	-		AO356_04620	0.35	+1.0
1,040,334	-		AO356_04620	0.35	-1.6
1,040,437	-		AO356_04620	0.57	+0.4
1,040,437	-		AO356_04620	0.57	+0.1
1,040,510	+		AO356_04620	0.73	-0.6
1,040,568	-		AO356_04620	0.85	+0.4
1,040,568	-		AO356_04620	0.85	+1.2
1,040,568	-		AO356_04620	0.85	-0.3
1,040,568	-		AO356_04620	0.85	-0.9
1,040,568	-		AO356_04620	0.85	+0.6
1,040,688	+				-0.8
1,040,688	+				-0.3
1,040,770	+				+1.2
1,040,771	-				-1.2
1,040,844	+		AO356_04625	0.14	-0.6
1,040,845	-		AO356_04625	0.14	+0.5
1,040,845	-		AO356_04625	0.14	+0.7
1,041,081	+		AO356_04625	0.29	-0.6
1,041,081	+		AO356_04625	0.29	+0.5
1,041,082	-		AO356_04625	0.29	+0.5
1,041,082	-		AO356_04625	0.29	-0.1
1,041,082	-		AO356_04625	0.29	+1.4