Experiment: syringaldehyde 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03265 and AO356_03270 are separated by 230 nucleotides AO356_03270 and AO356_03275 are separated by 11 nucleotides
AO356_03265: AO356_03265 - chemotaxis protein, at 724,012 to 725,493
_03265
AO356_03270: AO356_03270 - terminase, at 725,724 to 726,098
_03270
AO356_03275: AO356_03275 - acyl-CoA thioesterase, at 726,110 to 726,907
_03275
Position (kb) 725
726
727 Strain fitness (log2 ratio) -2
-1
0
1
2 at 724.805 kb on - strand, within AO356_03265 at 724.805 kb on - strand, within AO356_03265 at 725.126 kb on + strand, within AO356_03265 at 725.127 kb on - strand, within AO356_03265 at 725.602 kb on + strand at 725.621 kb on - strand at 725.621 kb on - strand at 725.682 kb on + strand at 725.682 kb on + strand at 725.682 kb on + strand at 725.682 kb on + strand at 725.683 kb on - strand at 725.683 kb on - strand at 725.683 kb on - strand at 725.683 kb on - strand at 725.683 kb on - strand at 725.683 kb on - strand at 725.695 kb on + strand at 725.695 kb on + strand at 725.695 kb on + strand at 725.695 kb on + strand at 725.695 kb on + strand at 725.696 kb on - strand at 725.696 kb on - strand at 725.696 kb on - strand at 725.696 kb on - strand at 725.696 kb on - strand at 725.696 kb on - strand at 725.696 kb on - strand at 725.717 kb on + strand at 725.717 kb on + strand at 725.718 kb on - strand at 725.718 kb on - strand at 725.718 kb on - strand at 725.718 kb on - strand at 725.718 kb on - strand at 725.769 kb on + strand, within AO356_03270 at 725.770 kb on - strand, within AO356_03270 at 725.863 kb on + strand, within AO356_03270 at 725.863 kb on + strand, within AO356_03270 at 725.864 kb on - strand, within AO356_03270 at 726.089 kb on + strand at 726.090 kb on - strand at 726.090 kb on - strand at 726.090 kb on - strand at 726.225 kb on + strand, within AO356_03275 at 726.225 kb on + strand, within AO356_03275 at 726.225 kb on + strand, within AO356_03275 at 726.225 kb on + strand, within AO356_03275 at 726.226 kb on - strand, within AO356_03275 at 726.226 kb on - strand, within AO356_03275 at 726.433 kb on + strand, within AO356_03275 at 726.434 kb on - strand, within AO356_03275 at 726.513 kb on + strand, within AO356_03275 at 726.513 kb on + strand, within AO356_03275 at 726.514 kb on - strand, within AO356_03275 at 726.736 kb on + strand, within AO356_03275 at 726.737 kb on - strand, within AO356_03275 at 726.737 kb on - strand, within AO356_03275 at 726.784 kb on + strand, within AO356_03275 at 726.784 kb on + strand, within AO356_03275 at 726.785 kb on - strand, within AO356_03275 at 726.785 kb on - strand, within AO356_03275 at 726.792 kb on + strand, within AO356_03275 at 726.792 kb on + strand, within AO356_03275 at 726.792 kb on + strand, within AO356_03275 at 726.793 kb on - strand, within AO356_03275 at 726.793 kb on - strand, within AO356_03275 at 727.064 kb on + strand at 727.064 kb on + strand at 727.064 kb on + strand at 727.064 kb on + strand at 727.065 kb on - strand at 727.065 kb on - strand at 727.079 kb on - strand at 727.079 kb on - strand at 727.079 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 5 mM remove 724,805 - AO356_03265 0.54 +0.6 724,805 - AO356_03265 0.54 +0.5 725,126 + AO356_03265 0.75 -0.3 725,127 - AO356_03265 0.75 +0.7 725,602 + -0.1 725,621 - -0.4 725,621 - +1.3 725,682 + -0.1 725,682 + -0.0 725,682 + -1.0 725,682 + +0.8 725,683 - +0.5 725,683 - -0.4 725,683 - -1.8 725,683 - -0.8 725,683 - -0.0 725,683 - +0.2 725,695 + +0.4 725,695 + +0.3 725,695 + +0.2 725,695 + +0.3 725,695 + -0.1 725,696 - -0.0 725,696 - -0.5 725,696 - +0.4 725,696 - -0.7 725,696 - -0.2 725,696 - -0.6 725,696 - +1.1 725,717 + +0.2 725,717 + +0.0 725,718 - -0.4 725,718 - +0.2 725,718 - -0.5 725,718 - -0.1 725,718 - -0.6 725,769 + AO356_03270 0.12 -1.4 725,770 - AO356_03270 0.12 -1.0 725,863 + AO356_03270 0.37 +0.5 725,863 + AO356_03270 0.37 +0.4 725,864 - AO356_03270 0.37 +0.2 726,089 + -0.2 726,090 - -0.1 726,090 - -0.1 726,090 - +0.8 726,225 + AO356_03275 0.14 -0.7 726,225 + AO356_03275 0.14 +1.5 726,225 + AO356_03275 0.14 -1.2 726,225 + AO356_03275 0.14 +0.2 726,226 - AO356_03275 0.15 -1.0 726,226 - AO356_03275 0.15 -1.6 726,433 + AO356_03275 0.40 +1.9 726,434 - AO356_03275 0.41 +0.5 726,513 + AO356_03275 0.51 -1.5 726,513 + AO356_03275 0.51 -0.1 726,514 - AO356_03275 0.51 +0.0 726,736 + AO356_03275 0.78 +0.4 726,737 - AO356_03275 0.79 +0.3 726,737 - AO356_03275 0.79 -0.8 726,784 + AO356_03275 0.84 +0.6 726,784 + AO356_03275 0.84 -0.1 726,785 - AO356_03275 0.85 +1.5 726,785 - AO356_03275 0.85 -0.4 726,792 + AO356_03275 0.85 +0.9 726,792 + AO356_03275 0.85 +0.2 726,792 + AO356_03275 0.85 +1.6 726,793 - AO356_03275 0.86 +0.9 726,793 - AO356_03275 0.86 -0.2 727,064 + +0.1 727,064 + -0.2 727,064 + +0.2 727,064 + +0.1 727,065 - -0.3 727,065 - +0.1 727,079 - -1.8 727,079 - +0.3 727,079 - -1.6
Or see this region's nucleotide sequence