Strain Fitness in Shewanella loihica PV-4 around Shew_3251

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,887,910	+		Shew_3250	0.29	+0.2
3,887,937	-		Shew_3250	0.31	-0.9
3,888,271	-		Shew_3250	0.58	-0.2
3,888,394	-		Shew_3250	0.68	+0.6
3,888,450	-		Shew_3250	0.73	-0.4
3,888,713	+				-1.1
3,888,921	-				+0.0
3,888,938	-				-0.2
3,889,341	-		Shew_3251	0.55	-0.3
3,889,540	-		Shew_3251	0.79	-0.4
3,889,703	+				-0.6
3,889,792	+				-0.4
3,889,834	+				+0.8
3,889,842	-				-0.3
3,889,934	-				-0.4
3,889,972	+				-0.3
3,890,011	-				+0.4
3,890,352	-		Shew_3252	0.26	+0.1
3,890,445	-		Shew_3252	0.35	-0.1