Strain Fitness in Shewanella loihica PV-4 around Shew_3193

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,801,403	+		Shew_3192	0.38	+0.4
3,801,590	+		Shew_3192	0.79	+0.3
3,801,857	+				-1.0
3,801,865	-				+0.3
3,802,041	+				-0.1
3,802,049	-				-0.2
3,802,432	+				-0.4
3,802,432	+				+0.1
3,802,440	-				-0.2
3,802,613	+		Shew_3193	0.10	-0.2
3,802,720	-		Shew_3193	0.14	-0.0
3,802,721	-		Shew_3193	0.14	-0.2
3,803,020	+		Shew_3193	0.26	+0.4
3,803,028	-		Shew_3193	0.26	-0.3
3,803,153	-		Shew_3193	0.31	+0.2
3,803,448	-		Shew_3193	0.42	+0.5
3,803,680	+		Shew_3193	0.51	-0.2
3,803,961	+		Shew_3193	0.62	-0.1
3,804,099	+		Shew_3193	0.67	-0.0
3,804,112	-		Shew_3193	0.68	-0.2
3,804,475	+		Shew_3193	0.81	+0.2
3,804,609	-		Shew_3193	0.87	+0.5
3,804,609	-		Shew_3193	0.87	-0.1
3,804,823	+				-0.0
3,804,866	-				+0.1
3,805,186	-				-0.4
3,805,527	-				+0.3
3,805,551	-				+0.1
3,805,552	-				+0.1
3,805,555	+				-0.0
3,805,600	+				+0.8
3,805,794	+		Shew_3194	0.26	-0.0
3,805,854	+		Shew_3194	0.35	-0.1