Strain Fitness in Shewanella loihica PV-4 around Shew_2361
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB |
|---|---|---|---|---|---|
| remove | |||||
| 2,760,995 | - | Shew_2360 | 0.43 | +0.9 | |
| 2,761,155 | + | Shew_2360 | 0.55 | +0.2 | |
| 2,761,181 | + | Shew_2360 | 0.57 | -1.1 | |
| 2,761,461 | - | Shew_2360 | 0.78 | -0.1 | |
| 2,761,701 | + | -0.1 | |||
| 2,761,701 | + | -0.0 | |||
| 2,762,211 | - | Shew_2361 | 0.44 | +3.5 | |
| 2,762,366 | + | Shew_2361 | 0.59 | +0.0 | |
| 2,762,407 | + | Shew_2361 | 0.63 | -0.2 | |
| 2,762,433 | + | Shew_2361 | 0.66 | -0.1 | |
| 2,762,975 | + | -0.2 | |||
| 2,763,012 | + | -0.5 | |||
| 2,763,198 | - | Shew_2362 | 0.22 | -0.4 | |
| 2,763,643 | + | Shew_2362 | 0.71 | +0.3 | |
| 2,763,643 | + | Shew_2362 | 0.71 | -0.2 | |
| 2,763,723 | + | Shew_2362 | 0.80 | +0.1 |
Or see this region's nucleotide sequence