Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2197

Experiment: L-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (N)
2,323,312	+		Dshi_2196	0.30	-1.4
2,323,315	+		Dshi_2196	0.30	-0.5
2,323,325	+		Dshi_2196	0.31	-0.4
2,323,355	+		Dshi_2196	0.34	+1.8
2,323,364	+		Dshi_2196	0.35	-0.7
2,323,387	-		Dshi_2196	0.37	+0.3
2,323,394	-		Dshi_2196	0.38	+0.1
2,323,400	+		Dshi_2196	0.38	+0.3
2,323,400	+		Dshi_2196	0.38	+1.0
2,323,400	+		Dshi_2196	0.38	-0.6
2,323,406	-		Dshi_2196	0.39	-0.1
2,323,408	-		Dshi_2196	0.39	+0.2
2,323,409	+		Dshi_2196	0.39	-0.5
2,323,409	+		Dshi_2196	0.39	+0.1
2,323,409	+		Dshi_2196	0.39	+0.4
2,323,409	+		Dshi_2196	0.39	-1.6
2,323,409	+		Dshi_2196	0.39	+0.7
2,323,417	-		Dshi_2196	0.40	-0.6
2,323,477	+		Dshi_2196	0.46	+0.7
2,323,487	+		Dshi_2196	0.47	+0.3
2,323,492	+		Dshi_2196	0.47	-1.1
2,323,495	-		Dshi_2196	0.48	-0.0
2,323,495	-		Dshi_2196	0.48	-0.4
2,323,497	+		Dshi_2196	0.48	+1.6
2,323,500	-		Dshi_2196	0.48	-1.4
2,323,501	+		Dshi_2196	0.48	-0.0
2,323,501	+		Dshi_2196	0.48	-1.1
2,323,502	+		Dshi_2196	0.48	-0.6
2,323,502	+		Dshi_2196	0.48	-0.8
2,323,502	+		Dshi_2196	0.48	-1.0
2,323,502	+		Dshi_2196	0.48	-1.8
2,323,502	+		Dshi_2196	0.48	-0.7
2,323,502	+		Dshi_2196	0.48	-0.1
2,323,502	+		Dshi_2196	0.48	-0.3
2,323,502	+		Dshi_2196	0.48	-0.2
2,323,502	+		Dshi_2196	0.48	+0.8
2,323,505	-		Dshi_2196	0.49	+0.7
2,323,506	+		Dshi_2196	0.49	+0.2
2,323,506	+		Dshi_2196	0.49	-0.0
2,323,506	+		Dshi_2196	0.49	+0.7
2,323,506	+		Dshi_2196	0.49	+0.0
2,323,506	+		Dshi_2196	0.49	+0.9
2,323,507	+		Dshi_2196	0.49	-0.2
2,323,507	+		Dshi_2196	0.49	+0.3
2,323,507	+		Dshi_2196	0.49	-0.4
2,323,509	-		Dshi_2196	0.49	-0.1
2,323,509	-		Dshi_2196	0.49	-0.1
2,323,510	-		Dshi_2196	0.49	-0.2
2,323,510	-		Dshi_2196	0.49	-1.4
2,323,510	-		Dshi_2196	0.49	+0.5
2,323,514	+		Dshi_2196	0.50	+0.2
2,323,514	-		Dshi_2196	0.50	-0.2
2,323,514	-		Dshi_2196	0.50	-0.1
2,323,515	-		Dshi_2196	0.50	-0.2
2,323,515	-		Dshi_2196	0.50	-0.0
2,323,520	-		Dshi_2196	0.50	-0.3
2,323,524	-		Dshi_2196	0.51	+0.1
2,323,536	-		Dshi_2196	0.52	+0.2
2,323,537	-		Dshi_2196	0.52	+0.7
2,323,542	-		Dshi_2196	0.52	+0.7
2,323,542	-		Dshi_2196	0.52	-0.6
2,323,545	-		Dshi_2196	0.53	+0.4
2,323,545	-		Dshi_2196	0.53	-1.6
2,323,545	-		Dshi_2196	0.53	-0.3
2,323,545	-		Dshi_2196	0.53	-0.2
2,323,546	-		Dshi_2196	0.53	-1.6
2,323,547	+		Dshi_2196	0.53	+0.1
2,323,555	-		Dshi_2196	0.54	-0.5
2,323,555	-		Dshi_2196	0.54	-0.2
2,323,555	-		Dshi_2196	0.54	-0.9
2,323,565	-		Dshi_2196	0.55	-0.1
2,323,592	-		Dshi_2196	0.57	+0.1
2,323,596	+		Dshi_2196	0.58	-2.2
2,323,614	-		Dshi_2196	0.59	+0.0
2,323,614	-		Dshi_2196	0.59	-0.4
2,323,621	+		Dshi_2196	0.60	-0.4
2,323,635	+		Dshi_2196	0.61	-0.1
2,323,640	+		Dshi_2196	0.62	+0.2
2,323,660	-		Dshi_2196	0.64	+0.3
2,323,660	-		Dshi_2196	0.64	-0.9
2,323,682	+		Dshi_2196	0.66	-0.5
2,323,683	+		Dshi_2196	0.66	-0.2
2,323,705	+		Dshi_2196	0.68	-0.8
2,323,705	+		Dshi_2196	0.68	-2.1
2,323,705	+		Dshi_2196	0.68	-0.1
2,323,710	+		Dshi_2196	0.69	-0.2
2,323,713	-		Dshi_2196	0.69	-0.6
2,323,745	+		Dshi_2196	0.72	+0.1
2,323,745	+		Dshi_2196	0.72	+0.2
2,323,753	-		Dshi_2196	0.73	+1.8
2,323,763	-		Dshi_2196	0.74	-0.8
2,323,763	-		Dshi_2196	0.74	+0.3
2,323,771	+		Dshi_2196	0.75	-0.5
2,323,773	+		Dshi_2196	0.75	+0.3
2,323,781	+		Dshi_2196	0.76	-0.4
2,323,789	-		Dshi_2196	0.76	-0.3
2,323,789	-		Dshi_2196	0.76	+0.9
2,323,807	-		Dshi_2196	0.78	+0.2
2,323,815	-		Dshi_2196	0.79	+0.4
2,323,815	-		Dshi_2196	0.79	-1.6
2,323,825	+		Dshi_2196	0.80	+0.4
2,323,826	-		Dshi_2196	0.80	-0.6
2,323,875	-		Dshi_2196	0.85	-0.6
2,323,905	+		Dshi_2196	0.88	+0.6
2,323,942	-				-0.3
2,323,942	-				-2.0
2,323,942	-				-0.2
2,323,956	-				-1.0
2,323,956	-				-0.5
2,323,958	-				-0.3
2,323,958	-				-0.1
2,323,980	+				+0.0
2,323,981	+				+0.2
2,323,988	-				-0.3
2,323,993	+				-0.3
2,323,993	+				-0.5
2,324,000	+				-0.3
2,324,001	+				+0.2
2,324,001	+				+0.2
2,324,001	+				-0.5
2,324,009	-				-2.0
2,324,009	-				-0.2
2,324,009	-				-0.4
2,324,009	-				-0.2
2,324,009	-				-1.1
2,324,009	-				-0.3
2,324,009	-				+1.8
2,324,009	-				-0.8
2,324,037	-				+0.1
2,324,065	+				+0.0
2,324,066	+				-1.1
2,324,081	+				+0.8
2,324,082	-				-1.0
2,324,098	-				+0.8
2,324,098	-				-2.4
2,324,102	-				+0.0
2,324,113	-				+0.1
2,324,128	+				+0.0
2,324,128	+				-0.9
2,324,128	+				+0.2
2,324,192	+				+0.0
2,324,196	+				-0.0
2,324,197	+				+0.4
2,324,197	+				+0.3
2,324,197	+				-0.6
2,324,197	+				-0.4
2,324,205	-				+0.0
2,324,218	+				-0.0
2,324,226	-				-2.9
2,324,253	-				+0.5
2,324,253	-				+0.2
2,324,268	+				-0.0
2,324,268	+				-1.0
2,324,268	+				+0.3
2,324,268	+				-0.5
2,324,268	+				+1.4
2,324,268	+				+1.5
2,324,268	+				+0.4
2,324,268	+				+0.0
2,324,276	-				+0.4
2,324,276	-				-0.6
2,324,276	-				-0.9
2,324,276	-				-0.2
2,324,276	-				+0.8
2,324,276	-				+1.0
2,324,276	-				+0.5
2,324,276	-				+0.8
2,324,276	-				-0.2
2,324,276	-				+0.4
2,324,301	-				+0.5
2,324,336	+				-0.4
2,324,344	-				-1.1
2,324,360	-				-0.8
2,324,360	-				-2.5
2,324,392	-				+1.1
2,324,436	+				-1.3
2,324,439	+				-0.6
2,324,526	+		Dshi_2197	0.14	+0.7
2,324,534	+		Dshi_2197	0.14	-1.6
2,324,645	+		Dshi_2197	0.21	-3.0
2,324,816	-		Dshi_2197	0.31	-0.5
2,324,859	-		Dshi_2197	0.34	-1.1
2,324,869	-		Dshi_2197	0.34	-3.1
2,324,968	+		Dshi_2197	0.40	-0.2
2,325,008	+		Dshi_2197	0.43	-0.7
2,325,037	+		Dshi_2197	0.44	-3.1
2,325,451	-		Dshi_2197	0.69	-1.0
2,325,461	-		Dshi_2197	0.70	-0.2
2,325,533	+		Dshi_2197	0.74	-0.3
2,325,555	+		Dshi_2197	0.76	-1.5
2,325,598	+		Dshi_2197	0.78	-0.8
2,325,696	+		Dshi_2197	0.84	-2.0
2,325,766	-		Dshi_2197	0.88	-1.9
2,325,766	-		Dshi_2197	0.88	+0.8
2,325,804	+				-0.8
2,325,869	-				-1.6
2,325,954	+				-0.4
2,325,969	+				-0.6
2,325,995	+				-1.8
2,326,003	-				+0.4
2,326,003	-				-0.3
2,326,018	+				-0.0
2,326,084	+				-1.4
2,326,142	+		Dshi_2198	0.22	-1.9
2,326,258	+		Dshi_2198	0.46	-0.3
2,326,271	+		Dshi_2198	0.49	+0.3
2,326,372	-		Dshi_2198	0.70	-1.4
2,326,607	-				-1.3
2,326,712	+				+0.2
2,326,785	+				+0.1
2,326,790	+				-0.7
2,326,798	-				+0.9
2,326,798	-				-0.5
2,326,827	-		Dshi_2199	0.13	-0.1
2,326,908	-		Dshi_2199	0.25	-0.2
2,326,921	+		Dshi_2199	0.27	-0.5
2,326,931	+		Dshi_2199	0.28	-0.6