Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2181

Experiment: L-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_2180 and Dshi_2181 are separated by 164 nucleotidesDshi_2181 and Dshi_2182 are separated by 172 nucleotidesDshi_2182 and Dshi_2183 overlap by 1 nucleotides Dshi_2180: Dshi_2180 - Beta-ketoacyl synthase (RefSeq), at 2,307,762 to 2,309,024 _2180 Dshi_2181: Dshi_2181 - acyl carrier protein (RefSeq), at 2,309,189 to 2,309,422 _2181 Dshi_2182: Dshi_2182 - 3-oxoacyl-(acyl-carrier-protein) reductase (RefSeq), at 2,309,595 to 2,310,332 _2182 Dshi_2183: Dshi_2183 - malonyl CoA-acyl carrier protein transacylase (RefSeq), at 2,310,332 to 2,311,279 _2183 Position (kb) 2309 2310Strain fitness (log2 ratio) -2 -1 0 1at 2309.033 kb on - strandat 2309.124 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (N)
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2,309,033 - -2.0
2,309,124 - -1.4

Or see this region's nucleotide sequence