Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29385

Experiment: Growth at pH9 and (C) D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth at pH9 and (C) D-Glucose
6,526,851	-		PFLU_RS29380	0.37	+1.3
6,526,865	+		PFLU_RS29380	0.38	-1.2
6,526,866	-		PFLU_RS29380	0.38	+0.2
6,526,866	-		PFLU_RS29380	0.38	+1.4
6,526,866	-		PFLU_RS29380	0.38	+0.8
6,526,867	+		PFLU_RS29380	0.38	+0.5
6,526,868	-		PFLU_RS29380	0.38	+2.7
6,526,868	-		PFLU_RS29380	0.38	+1.5
6,526,910	+		PFLU_RS29380	0.41	+3.4
6,526,910	+		PFLU_RS29380	0.41	+0.5
6,526,911	-		PFLU_RS29380	0.41	+1.5
6,526,911	-		PFLU_RS29380	0.41	+1.6
6,526,927	+		PFLU_RS29380	0.42	+3.9
6,526,927	+		PFLU_RS29380	0.42	+1.2
6,526,927	+		PFLU_RS29380	0.42	+2.5
6,526,927	+		PFLU_RS29380	0.42	+0.7
6,526,927	+		PFLU_RS29380	0.42	+1.7
6,526,927	+		PFLU_RS29380	0.42	+0.9
6,526,927	+		PFLU_RS29380	0.42	+2.3
6,526,927	+		PFLU_RS29380	0.42	+1.5
6,526,927	+		PFLU_RS29380	0.42	+3.3
6,526,928	-		PFLU_RS29380	0.42	+3.1
6,526,928	-		PFLU_RS29380	0.42	+2.1
6,526,928	-		PFLU_RS29380	0.42	+2.6
6,526,928	-		PFLU_RS29380	0.42	+1.0
6,526,928	-		PFLU_RS29380	0.42	+2.5
6,526,928	-		PFLU_RS29380	0.42	+0.7
6,526,928	-		PFLU_RS29380	0.42	-0.3
6,526,931	+		PFLU_RS29380	0.43	-0.1
6,526,931	+		PFLU_RS29380	0.43	+0.7
6,526,932	-		PFLU_RS29380	0.43	+1.0
6,526,932	-		PFLU_RS29380	0.43	+2.1
6,527,224	-		PFLU_RS29380	0.65	+2.3
6,527,266	-		PFLU_RS29380	0.68	-0.5
6,527,288	+		PFLU_RS29380	0.70	+2.0
6,527,289	-		PFLU_RS29380	0.70	+3.3
6,527,289	-		PFLU_RS29380	0.70	+2.2
6,527,336	+		PFLU_RS29380	0.74	+1.7
6,527,336	+		PFLU_RS29380	0.74	+2.3
6,527,337	-		PFLU_RS29380	0.74	+1.3
6,527,337	-		PFLU_RS29380	0.74	-0.7
6,527,337	-		PFLU_RS29380	0.74	+2.6
6,527,420	+		PFLU_RS29380	0.80	-0.5
6,527,420	+		PFLU_RS29380	0.80	-0.5
6,527,420	+		PFLU_RS29380	0.80	+0.3
6,527,420	+		PFLU_RS29380	0.80	-0.5
6,527,420	+		PFLU_RS29380	0.80	+1.5
6,527,421	-		PFLU_RS29380	0.80	+0.5
6,527,421	-		PFLU_RS29380	0.80	+2.8
6,527,421	-		PFLU_RS29380	0.80	+2.8
6,527,421	-		PFLU_RS29380	0.80	-1.0
6,527,421	-		PFLU_RS29380	0.80	+0.1
6,527,421	-		PFLU_RS29380	0.80	+2.0
6,527,421	-		PFLU_RS29380	0.80	+1.5
6,527,421	-		PFLU_RS29380	0.80	-0.8
6,527,421	-		PFLU_RS29380	0.80	-0.5
6,527,421	-		PFLU_RS29380	0.80	+4.3
6,527,526	-		PFLU_RS29380	0.88	+2.3
6,527,624	+				-1.0
6,527,624	+				-2.1
6,527,624	+				+3.0
6,527,624	+				+1.8
6,527,624	+				-1.2
6,527,624	+				-2.2
6,527,624	+				-0.4
6,527,624	+				-1.4
6,527,624	+				-0.6
6,527,624	+				+1.3
6,527,624	+				+1.0
6,527,624	+				+0.5
6,527,624	+				-2.0
6,527,624	+				+0.9
6,527,624	+				+2.5
6,527,625	-				-2.0
6,527,625	-				+1.6
6,527,625	-				+2.8
6,527,625	-				+1.3
6,527,625	-				+1.8
6,527,625	-				+3.3
6,527,625	-				-0.3
6,527,625	-				+1.5
6,527,625	-				+3.1
6,527,625	-				+1.1
6,527,625	-				+4.0
6,527,625	-				+2.5
6,527,625	-				+2.7
6,527,625	-				+2.0
6,527,627	+				+1.3
6,527,627	+				-0.2
6,527,627	+				+1.0
6,527,627	+				-1.4
6,527,627	+				-1.4
6,527,627	+				-2.2
6,527,628	-				-1.8
6,527,628	-				+2.5
6,527,628	-				+2.6
6,527,628	-				+0.9
6,527,628	-				+0.8
6,527,680	+				-0.7
6,527,680	+				-1.2
6,527,680	+				+0.5
6,527,680	+				-1.3
6,527,680	+				+0.9
6,527,680	+				-2.6
6,527,680	+				-0.3
6,527,681	-				+0.3
6,527,681	-				+2.2
6,527,681	-				+1.3
6,527,681	-				-0.8
6,527,681	-				+0.5
6,527,681	-				-0.6
6,527,681	-				+2.5
6,527,681	-				-0.5
6,527,682	+				-1.2
6,527,682	+				-0.1
6,527,683	-				+1.5
6,527,683	-				+0.2
6,527,683	-				+0.3
6,527,683	-				-0.7
6,527,716	+				-1.1
6,527,742	-				-0.5
6,527,742	-				-0.4
6,527,770	+				-2.6
6,527,772	+				+2.3
6,527,772	+				-0.7
6,527,772	+				+1.5
6,527,773	-				+1.1
6,527,783	-				-2.2
6,527,783	-				-1.5
6,527,832	+				-1.3
6,527,833	-				-1.6
6,527,838	+				+3.5
6,527,839	-				-1.7
6,527,913	+		PFLU_RS29385	0.16	+1.8
6,527,913	+		PFLU_RS29385	0.16	+2.5
6,527,913	+		PFLU_RS29385	0.16	+2.0
6,527,913	+		PFLU_RS29385	0.16	-1.7
6,527,913	+		PFLU_RS29385	0.16	+2.5
6,527,913	+		PFLU_RS29385	0.16	-1.5
6,527,913	+		PFLU_RS29385	0.16	+1.1
6,527,913	+		PFLU_RS29385	0.16	+0.0
6,527,913	+		PFLU_RS29385	0.16	+0.9
6,527,913	+		PFLU_RS29385	0.16	+1.2
6,527,914	-		PFLU_RS29385	0.17	-1.9
6,527,914	-		PFLU_RS29385	0.17	+1.6
6,527,914	-		PFLU_RS29385	0.17	+0.9
6,527,914	-		PFLU_RS29385	0.17	-0.4
6,527,914	-		PFLU_RS29385	0.17	-0.6
6,527,914	-		PFLU_RS29385	0.17	-1.7
6,527,914	-		PFLU_RS29385	0.17	+2.3
6,527,914	-		PFLU_RS29385	0.17	-0.3
6,527,914	-		PFLU_RS29385	0.17	-1.8
6,527,914	-		PFLU_RS29385	0.17	+0.0
6,527,914	-		PFLU_RS29385	0.17	-2.4
6,527,914	-		PFLU_RS29385	0.17	-1.8
6,527,964	+		PFLU_RS29385	0.27	-0.1
6,527,965	-		PFLU_RS29385	0.27	-2.6
6,527,965	-		PFLU_RS29385	0.27	+0.9
6,528,010	+		PFLU_RS29385	0.36	+2.7
6,528,010	+		PFLU_RS29385	0.36	+0.6
6,528,011	-		PFLU_RS29385	0.36	+3.0
6,528,011	-		PFLU_RS29385	0.36	+0.2
6,528,011	-		PFLU_RS29385	0.36	+1.7
6,528,039	-		PFLU_RS29385	0.42	+2.0
6,528,039	-		PFLU_RS29385	0.42	+1.5
6,528,039	-		PFLU_RS29385	0.42	+0.5
6,528,039	-		PFLU_RS29385	0.42	-0.1
6,528,039	-		PFLU_RS29385	0.42	-0.2
6,528,056	+		PFLU_RS29385	0.46	+2.1
6,528,056	+		PFLU_RS29385	0.46	-0.1
6,528,056	+		PFLU_RS29385	0.46	+1.2
6,528,056	+		PFLU_RS29385	0.46	-1.9
6,528,056	+		PFLU_RS29385	0.46	-1.1
6,528,056	+		PFLU_RS29385	0.46	+0.6
6,528,057	-		PFLU_RS29385	0.46	+0.5
6,528,057	-		PFLU_RS29385	0.46	+0.6
6,528,057	-		PFLU_RS29385	0.46	+1.6
6,528,057	-		PFLU_RS29385	0.46	-1.0
6,528,057	-		PFLU_RS29385	0.46	+1.3
6,528,057	-		PFLU_RS29385	0.46	-1.1
6,528,057	-		PFLU_RS29385	0.46	-1.6
6,528,079	+		PFLU_RS29385	0.50	+0.5
6,528,079	+		PFLU_RS29385	0.50	+2.4
6,528,079	+		PFLU_RS29385	0.50	+1.3
6,528,079	+		PFLU_RS29385	0.50	-0.5
6,528,079	+		PFLU_RS29385	0.50	-1.1
6,528,080	-		PFLU_RS29385	0.51	+2.0
6,528,172	+		PFLU_RS29385	0.69	-1.2
6,528,172	+		PFLU_RS29385	0.69	+0.4
6,528,172	+		PFLU_RS29385	0.69	+0.3
6,528,172	+		PFLU_RS29385	0.69	+2.5
6,528,172	+		PFLU_RS29385	0.69	+1.7
6,528,172	+		PFLU_RS29385	0.69	-0.3
6,528,173	-		PFLU_RS29385	0.70	-1.1
6,528,173	-		PFLU_RS29385	0.70	-1.7
6,528,173	-		PFLU_RS29385	0.70	-2.5
6,528,173	-		PFLU_RS29385	0.70	+0.4
6,528,173	-		PFLU_RS29385	0.70	+2.2
6,528,173	-		PFLU_RS29385	0.70	-0.5
6,528,176	+		PFLU_RS29385	0.70	+2.4
6,528,176	+		PFLU_RS29385	0.70	+1.0
6,528,176	+		PFLU_RS29385	0.70	+2.6
6,528,176	+		PFLU_RS29385	0.70	+2.6
6,528,176	+		PFLU_RS29385	0.70	+4.0
6,528,176	+		PFLU_RS29385	0.70	+2.7
6,528,176	+		PFLU_RS29385	0.70	+3.1
6,528,177	-		PFLU_RS29385	0.70	+2.5
6,528,177	-		PFLU_RS29385	0.70	-0.1
6,528,177	-		PFLU_RS29385	0.70	+1.5
6,528,177	-		PFLU_RS29385	0.70	+1.3
6,528,177	-		PFLU_RS29385	0.70	+1.9
6,528,177	-		PFLU_RS29385	0.70	-1.1
6,528,209	-		PFLU_RS29385	0.77	+1.1
6,528,228	+		PFLU_RS29385	0.81	+2.3
6,528,268	+		PFLU_RS29385	0.89	+1.1
6,528,268	+		PFLU_RS29385	0.89	-1.7
6,528,268	+		PFLU_RS29385	0.89	+2.5
6,528,268	+		PFLU_RS29385	0.89	+0.7
6,528,268	+		PFLU_RS29385	0.89	+1.3
6,528,268	+		PFLU_RS29385	0.89	+0.0
6,528,268	+		PFLU_RS29385	0.89	+3.0
6,528,268	+		PFLU_RS29385	0.89	+3.3
6,528,268	+		PFLU_RS29385	0.89	+4.4
6,528,268	+		PFLU_RS29385	0.89	+0.6
6,528,268	+		PFLU_RS29385	0.89	+1.3
6,528,268	+		PFLU_RS29385	0.89	+3.4
6,528,268	+		PFLU_RS29385	0.89	+2.1
6,528,268	+		PFLU_RS29385	0.89	+1.1
6,528,268	+		PFLU_RS29385	0.89	+2.1
6,528,268	+		PFLU_RS29385	0.89	+1.3
6,528,268	+		PFLU_RS29385	0.89	+1.0
6,528,268	+		PFLU_RS29385	0.89	+0.6
6,528,268	+		PFLU_RS29385	0.89	+2.0
6,528,268	+		PFLU_RS29385	0.89	+1.2
6,528,268	+		PFLU_RS29385	0.89	+3.3
6,528,268	+		PFLU_RS29385	0.89	+0.8
6,528,268	+		PFLU_RS29385	0.89	+1.4
6,528,268	+		PFLU_RS29385	0.89	+1.2
6,528,268	+		PFLU_RS29385	0.89	-0.5
6,528,268	+		PFLU_RS29385	0.89	-0.1
6,528,268	+		PFLU_RS29385	0.89	+0.6
6,528,268	+		PFLU_RS29385	0.89	+2.8
6,528,268	+		PFLU_RS29385	0.89	+1.9
6,528,268	+		PFLU_RS29385	0.89	+0.3
6,528,268	+		PFLU_RS29385	0.89	+3.5
6,528,268	+		PFLU_RS29385	0.89	+2.2
6,528,268	+		PFLU_RS29385	0.89	+2.5
6,528,268	+		PFLU_RS29385	0.89	+1.5
6,528,268	+		PFLU_RS29385	0.89	+1.5
6,528,268	+		PFLU_RS29385	0.89	+3.0
6,528,268	+		PFLU_RS29385	0.89	+3.0
6,528,268	+		PFLU_RS29385	0.89	+1.3
6,528,268	+		PFLU_RS29385	0.89	+0.6
6,528,268	+		PFLU_RS29385	0.89	+1.3
6,528,268	+		PFLU_RS29385	0.89	+2.1
6,528,268	+		PFLU_RS29385	0.89	+2.2
6,528,268	+		PFLU_RS29385	0.89	+1.9
6,528,268	+		PFLU_RS29385	0.89	-0.3
6,528,268	+		PFLU_RS29385	0.89	+2.3
6,528,268	+		PFLU_RS29385	0.89	+1.7
6,528,268	+		PFLU_RS29385	0.89	-0.5
6,528,268	+		PFLU_RS29385	0.89	+0.8
6,528,268	+		PFLU_RS29385	0.89	+2.0
6,528,268	+		PFLU_RS29385	0.89	+2.2
6,528,268	+		PFLU_RS29385	0.89	+3.2
6,528,268	+		PFLU_RS29385	0.89	-1.8
6,528,268	+		PFLU_RS29385	0.89	-1.8
6,528,268	+		PFLU_RS29385	0.89	+2.8
6,528,268	+		PFLU_RS29385	0.89	+1.7
6,528,268	+		PFLU_RS29385	0.89	+1.6
6,528,268	+		PFLU_RS29385	0.89	+3.1
6,528,269	-		PFLU_RS29385	0.89	-0.1
6,528,269	-		PFLU_RS29385	0.89	+2.3
6,528,269	-		PFLU_RS29385	0.89	-1.4
6,528,269	-		PFLU_RS29385	0.89	+1.6
6,528,269	-		PFLU_RS29385	0.89	+1.6
6,528,269	-		PFLU_RS29385	0.89	-0.2
6,528,269	-		PFLU_RS29385	0.89	+1.5
6,528,269	-		PFLU_RS29385	0.89	-0.1
6,528,269	-		PFLU_RS29385	0.89	+1.1
6,528,269	-		PFLU_RS29385	0.89	+1.0
6,528,269	-		PFLU_RS29385	0.89	+2.0
6,528,269	-		PFLU_RS29385	0.89	+2.1
6,528,269	-		PFLU_RS29385	0.89	+1.1
6,528,269	-		PFLU_RS29385	0.89	+4.1
6,528,269	-		PFLU_RS29385	0.89	+1.7
6,528,269	-		PFLU_RS29385	0.89	+1.2
6,528,269	-		PFLU_RS29385	0.89	+2.0
6,528,269	-		PFLU_RS29385	0.89	-1.2
6,528,269	-		PFLU_RS29385	0.89	+0.6
6,528,269	-		PFLU_RS29385	0.89	-1.6
6,528,269	-		PFLU_RS29385	0.89	-0.3
6,528,269	-		PFLU_RS29385	0.89	+0.4
6,528,269	-		PFLU_RS29385	0.89	+1.3
6,528,269	-		PFLU_RS29385	0.89	+2.0
6,528,269	-		PFLU_RS29385	0.89	+1.7
6,528,269	-		PFLU_RS29385	0.89	+1.1
6,528,269	-		PFLU_RS29385	0.89	+0.5
6,528,269	-		PFLU_RS29385	0.89	+1.5
6,528,269	-		PFLU_RS29385	0.89	-1.7
6,528,269	-		PFLU_RS29385	0.89	+2.8
6,528,269	-		PFLU_RS29385	0.89	+4.3
6,528,269	-		PFLU_RS29385	0.89	-1.2
6,528,269	-		PFLU_RS29385	0.89	-1.0
6,528,269	-		PFLU_RS29385	0.89	+2.3
6,528,269	-		PFLU_RS29385	0.89	+1.0
6,528,269	-		PFLU_RS29385	0.89	-2.0
6,528,269	-		PFLU_RS29385	0.89	-1.2
6,528,269	-		PFLU_RS29385	0.89	-0.1
6,528,269	-		PFLU_RS29385	0.89	+0.0
6,528,269	-		PFLU_RS29385	0.89	+2.3
6,528,269	-		PFLU_RS29385	0.89	-0.5
6,528,269	-		PFLU_RS29385	0.89	-1.9
6,528,269	-		PFLU_RS29385	0.89	+0.5
6,528,269	-		PFLU_RS29385	0.89	-0.6
6,528,269	-		PFLU_RS29385	0.89	+0.7
6,528,269	-		PFLU_RS29385	0.89	-1.3
6,528,269	-		PFLU_RS29385	0.89	+0.7
6,528,269	-		PFLU_RS29385	0.89	-1.3
6,528,269	-		PFLU_RS29385	0.89	-1.9
6,528,269	-		PFLU_RS29385	0.89	+2.2
6,528,269	-		PFLU_RS29385	0.89	+1.2
6,528,269	-		PFLU_RS29385	0.89	+0.3
6,528,269	-		PFLU_RS29385	0.89	+1.3
6,528,269	-		PFLU_RS29385	0.89	+0.4
6,528,269	-		PFLU_RS29385	0.89	+2.0
6,528,270	+		PFLU_RS29385	0.89	+1.3
6,528,270	+		PFLU_RS29385	0.89	+1.0
6,528,270	+		PFLU_RS29385	0.89	+2.0
6,528,270	+		PFLU_RS29385	0.89	+1.4
6,528,270	+		PFLU_RS29385	0.89	-1.8
6,528,270	+		PFLU_RS29385	0.89	-1.5
6,528,271	-		PFLU_RS29385	0.90	+0.2
6,528,271	-		PFLU_RS29385	0.90	+1.5
6,528,337	+				-2.9
6,528,345	+				+1.2
6,528,345	+				-2.6
6,528,345	+				+0.0
6,528,346	-				+0.3
6,528,346	-				+1.5
6,528,367	+				+0.5
6,528,367	+				+0.1
6,528,367	+				+0.6
6,528,367	+				+0.8
6,528,367	+				+1.3
6,528,367	+				-1.7
6,528,367	+				-2.0
6,528,367	+				-2.8
6,528,367	+				-2.5
6,528,367	+				+1.1
6,528,367	+				+0.7
6,528,367	+				+1.3
6,528,367	+				+1.0
6,528,367	+				-2.7
6,528,367	+				+2.7
6,528,367	+				-1.5
6,528,367	+				-1.7
6,528,367	+				-0.3
6,528,367	+				+0.2
6,528,367	+				-1.8
6,528,367	+				-1.6
6,528,367	+				+1.7
6,528,367	+				+1.5
6,528,367	+				+1.2
6,528,367	+				+1.7
6,528,367	+				-2.3
6,528,367	+				+0.3
6,528,367	+				-1.6
6,528,367	+				+0.9
6,528,367	+				+0.8
6,528,367	+				-0.7
6,528,367	+				-0.3
6,528,367	+				+1.9
6,528,367	+				-0.8
6,528,367	+				-1.1
6,528,367	+				-1.8
6,528,367	+				-1.5
6,528,367	+				+1.7
6,528,367	+				-2.9
6,528,367	+				-1.1
6,528,367	+				-0.1
6,528,367	+				-1.7
6,528,368	-				+0.5
6,528,368	-				-0.7
6,528,368	-				-0.2
6,528,368	-				+1.5
6,528,368	-				-2.1
6,528,368	-				+0.4
6,528,368	-				+2.1
6,528,368	-				+2.7
6,528,368	-				-0.5
6,528,368	-				+0.1
6,528,368	-				+1.4
6,528,368	-				+0.2
6,528,368	-				+1.5
6,528,368	-				+0.4
6,528,368	-				+0.2
6,528,368	-				+2.1
6,528,368	-				-1.3
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6,528,368	-				+0.7
6,528,368	-				-1.0
6,528,368	-				+2.7
6,528,368	-				-1.2
6,528,368	-				-0.1
6,528,368	-				-3.2
6,528,368	-				+2.8
6,528,368	-				-1.7
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6,528,368	-				+1.3
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6,528,484	+		PFLU_RS29390	0.42	+0.5
6,528,484	+		PFLU_RS29390	0.42	-2.3
6,528,484	+		PFLU_RS29390	0.42	+1.5
6,528,484	+		PFLU_RS29390	0.42	-0.1
6,528,485	-		PFLU_RS29390	0.42	+1.5
6,528,485	-		PFLU_RS29390	0.42	+1.4
6,528,485	-		PFLU_RS29390	0.42	-2.0
6,528,485	-		PFLU_RS29390	0.42	+1.5
6,528,485	-		PFLU_RS29390	0.42	-1.4
6,528,500	+		PFLU_RS29390	0.46	-2.4
6,528,500	+		PFLU_RS29390	0.46	-2.2
6,528,501	-		PFLU_RS29390	0.47	+4.0
6,528,501	-		PFLU_RS29390	0.47	+0.0
6,528,560	+		PFLU_RS29390	0.63	+0.6
6,528,699	+				-1.8
6,528,700	-				+1.7
6,528,713	+				+0.9
6,528,713	+				-1.5
6,528,713	+				-0.4
6,528,714	-				+0.5
6,528,714	-				+0.0
6,528,768	+				-0.1
6,528,768	+				-1.8
6,528,768	+				+0.5
6,528,769	-				-1.8
6,528,835	+				-0.5
6,528,835	+				-2.3
6,528,835	+				-2.0
6,528,835	+				-1.4
6,528,836	-				+0.7
6,528,836	-				+0.9
6,528,836	-				+1.5
6,528,836	-				-2.0
6,528,838	+				-2.0
6,528,838	+				+0.3
6,528,839	-				+0.3
6,528,911	+				+0.2
6,528,911	+				-2.0
6,529,017	+		PFLU_RS29395	0.16	+1.0
6,529,304	+		PFLU_RS29395	0.39	+2.1
6,529,304	+		PFLU_RS29395	0.39	+1.2
6,529,321	+		PFLU_RS29395	0.40	-0.7
6,529,321	+		PFLU_RS29395	0.40	+2.0
6,529,321	+		PFLU_RS29395	0.40	-2.5