Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12145

Experiment: Vanillin 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2.5 mM
2,761,845	-		AO356_12135	0.68	+0.5
2,761,982	+		AO356_12135	0.77	+0.4
2,761,982	+		AO356_12135	0.77	+0.6
2,761,982	+		AO356_12135	0.77	+0.0
2,761,983	-		AO356_12135	0.78	-2.1
2,762,006	+		AO356_12135	0.79	+0.9
2,762,006	+		AO356_12135	0.79	+0.2
2,762,006	+		AO356_12135	0.79	-0.1
2,762,007	-		AO356_12135	0.79	-0.1
2,762,007	-		AO356_12135	0.79	-0.3
2,762,007	-		AO356_12135	0.79	+0.1
2,762,036	+		AO356_12135	0.81	-0.5
2,762,123	+		AO356_12135	0.87	+0.2
2,762,123	+		AO356_12135	0.87	+0.7
2,762,123	+		AO356_12135	0.87	-0.4
2,762,124	-		AO356_12135	0.87	+0.5
2,762,124	-		AO356_12135	0.87	-1.5
2,762,261	+				+0.6
2,762,261	+				+0.9
2,762,261	+				-1.5
2,762,261	+				+1.0
2,762,261	+				-0.8
2,762,261	+				+0.5
2,762,261	+				+0.3
2,762,262	-				-1.5
2,762,262	-				-0.2
2,762,262	-				-0.2
2,762,262	-				+1.4
2,762,312	+				-0.3
2,762,327	+				-0.4
2,762,328	-				-0.1
2,762,328	-				+0.5
2,762,551	+		AO356_12140	0.56	-0.3
2,762,552	-		AO356_12140	0.56	-0.1
2,762,561	+		AO356_12140	0.58	-0.9
2,762,749	+				+0.5
2,762,749	+				-0.0
2,762,749	+				+0.1
2,762,749	+				+0.6
2,762,750	-				-0.0
2,762,752	+				+0.1
2,762,753	-				+0.4
2,762,753	-				+0.0
2,762,753	-				-0.1
2,762,753	-				-0.6
2,762,753	-				+0.6
2,762,805	+				+0.8
2,762,855	+				-0.7
2,762,855	+				+0.8
2,762,855	+				+1.1
2,762,855	+				+0.5
2,762,855	+				+0.5
2,762,856	-				+0.7
2,762,856	-				+0.0
2,762,856	-				+0.5
2,762,856	-				+0.1
2,762,856	-				+0.1
2,762,856	-				-0.2
2,762,856	-				+0.6
2,762,965	+		AO356_12145	0.13	+1.1
2,762,965	+		AO356_12145	0.13	+0.4
2,762,965	+		AO356_12145	0.13	-0.7
2,762,965	+		AO356_12145	0.13	+0.1
2,762,965	+		AO356_12145	0.13	+0.1
2,762,966	-		AO356_12145	0.13	-0.5
2,762,966	-		AO356_12145	0.13	+1.1
2,762,966	-		AO356_12145	0.13	-0.4
2,762,966	-		AO356_12145	0.13	+0.3
2,762,966	-		AO356_12145	0.13	+0.1
2,762,997	-		AO356_12145	0.15	+0.5
2,762,997	-		AO356_12145	0.15	+0.6
2,763,145	+		AO356_12145	0.23	-0.2
2,763,145	+		AO356_12145	0.23	+0.1
2,763,210	-		AO356_12145	0.27	+0.7
2,763,210	-		AO356_12145	0.27	-0.1
2,763,259	+		AO356_12145	0.29	-0.2
2,763,259	+		AO356_12145	0.29	+0.3
2,763,260	-		AO356_12145	0.29	-1.0
2,763,260	-		AO356_12145	0.29	-0.2
2,763,260	-		AO356_12145	0.29	-0.2
2,763,277	+		AO356_12145	0.30	-0.3
2,763,277	+		AO356_12145	0.30	+0.3
2,763,278	-		AO356_12145	0.30	+0.1
2,763,278	-		AO356_12145	0.30	+0.6
2,763,278	-		AO356_12145	0.30	-0.0
2,763,278	-		AO356_12145	0.30	+0.8
2,763,278	-		AO356_12145	0.30	+0.4
2,763,278	-		AO356_12145	0.30	-0.1
2,763,278	-		AO356_12145	0.30	+0.1
2,763,290	+		AO356_12145	0.31	+0.4
2,763,290	+		AO356_12145	0.31	+0.5
2,763,290	+		AO356_12145	0.31	-0.2
2,763,291	-		AO356_12145	0.31	+1.7
2,763,291	-		AO356_12145	0.31	+1.0
2,763,291	-		AO356_12145	0.31	-0.1
2,763,291	-		AO356_12145	0.31	+1.4
2,763,291	-		AO356_12145	0.31	-0.0
2,763,295	-		AO356_12145	0.31	+0.4
2,763,448	-		AO356_12145	0.40	-1.5
2,763,448	-		AO356_12145	0.40	+0.4
2,763,466	+		AO356_12145	0.41	+0.6
2,763,467	-		AO356_12145	0.41	+0.5
2,763,478	+		AO356_12145	0.42	+0.7
2,763,478	+		AO356_12145	0.42	+0.4
2,763,479	-		AO356_12145	0.42	+0.4
2,763,566	+		AO356_12145	0.47	+0.4
2,763,566	+		AO356_12145	0.47	+0.5
2,763,566	+		AO356_12145	0.47	-1.2
2,763,566	+		AO356_12145	0.47	-0.2
2,763,566	+		AO356_12145	0.47	-0.4
2,763,566	+		AO356_12145	0.47	+0.7
2,763,566	+		AO356_12145	0.47	+0.5
2,763,566	+		AO356_12145	0.47	-0.5
2,763,566	+		AO356_12145	0.47	-0.0
2,763,566	+		AO356_12145	0.47	+0.8
2,763,566	+		AO356_12145	0.47	+0.4
2,763,567	-		AO356_12145	0.47	+0.4
2,763,567	-		AO356_12145	0.47	+0.8
2,763,567	-		AO356_12145	0.47	-0.0
2,763,567	-		AO356_12145	0.47	+0.4
2,763,634	-		AO356_12145	0.50	-0.3
2,763,638	+		AO356_12145	0.51	-0.1
2,763,638	+		AO356_12145	0.51	-0.3
2,763,638	+		AO356_12145	0.51	+0.4
2,763,638	+		AO356_12145	0.51	+1.1
2,763,638	+		AO356_12145	0.51	+0.4
2,763,638	+		AO356_12145	0.51	+1.5
2,763,638	+		AO356_12145	0.51	+0.2
2,763,638	+		AO356_12145	0.51	-0.2
2,763,638	+		AO356_12145	0.51	+1.5
2,763,639	-		AO356_12145	0.51	+0.4
2,763,639	-		AO356_12145	0.51	+1.0
2,763,639	-		AO356_12145	0.51	+0.1
2,763,639	-		AO356_12145	0.51	+0.3
2,763,639	-		AO356_12145	0.51	+0.6
2,763,639	-		AO356_12145	0.51	-0.0
2,763,639	-		AO356_12145	0.51	+0.4
2,763,639	-		AO356_12145	0.51	+0.5
2,763,639	-		AO356_12145	0.51	-0.8
2,763,639	-		AO356_12145	0.51	-0.3
2,763,718	+		AO356_12145	0.55	-0.1
2,763,718	+		AO356_12145	0.55	+0.1
2,763,718	+		AO356_12145	0.55	+0.4
2,763,718	+		AO356_12145	0.55	-0.5
2,763,718	+		AO356_12145	0.55	-1.0
2,763,719	-		AO356_12145	0.55	-0.3
2,763,739	+		AO356_12145	0.56	-0.3
2,763,817	+		AO356_12145	0.61	+1.0
2,763,817	+		AO356_12145	0.61	-0.5
2,763,817	+		AO356_12145	0.61	-0.1
2,763,817	+		AO356_12145	0.61	+0.3
2,763,817	+		AO356_12145	0.61	-0.5
2,763,817	+		AO356_12145	0.61	+0.6
2,763,817	+		AO356_12145	0.61	+0.4
2,763,817	+		AO356_12145	0.61	-0.2
2,763,817	+		AO356_12145	0.61	+0.0
2,763,818	-		AO356_12145	0.61	-0.3
2,763,818	-		AO356_12145	0.61	+0.3
2,763,818	-		AO356_12145	0.61	+0.7
2,763,818	-		AO356_12145	0.61	-0.1
2,763,818	-		AO356_12145	0.61	-0.3
2,763,818	-		AO356_12145	0.61	-0.6
2,763,818	-		AO356_12145	0.61	+0.3
2,763,818	-		AO356_12145	0.61	+0.6
2,763,818	-		AO356_12145	0.61	+0.3
2,763,877	+		AO356_12145	0.64	+0.2
2,763,877	+		AO356_12145	0.64	+0.8
2,763,877	+		AO356_12145	0.64	+0.1
2,763,878	-		AO356_12145	0.64	-0.2
2,763,878	-		AO356_12145	0.64	-1.1
2,763,880	+		AO356_12145	0.64	+0.1
2,763,880	+		AO356_12145	0.64	-0.6
2,763,880	+		AO356_12145	0.64	+0.8
2,763,880	+		AO356_12145	0.64	+0.3
2,763,880	+		AO356_12145	0.64	+0.7
2,763,881	-		AO356_12145	0.64	+0.3
2,763,881	-		AO356_12145	0.64	-0.0
2,763,881	-		AO356_12145	0.64	-1.4
2,764,159	+		AO356_12145	0.80	+0.0
2,764,159	+		AO356_12145	0.80	+1.1
2,764,159	+		AO356_12145	0.80	-0.4
2,764,159	+		AO356_12145	0.80	-0.3
2,764,160	-		AO356_12145	0.80	+0.3
2,764,160	-		AO356_12145	0.80	-0.9
2,764,160	-		AO356_12145	0.80	-0.4
2,764,363	+				+0.3
2,764,363	+				+0.7
2,764,363	+				+0.7
2,764,364	-				-0.8
2,764,364	-				+0.9
2,764,364	-				-0.4
2,764,423	+				-0.3
2,764,423	+				-0.5
2,764,423	+				+0.8
2,764,423	+				+0.1
2,764,423	+				+0.0
2,764,424	-				+0.4
2,764,424	-				+0.5
2,764,424	-				-0.8
2,764,424	-				+0.2
2,764,424	-				-0.2
2,764,480	+				+0.5
2,764,480	+				+0.1
2,764,480	+				+0.0
2,764,480	+				+0.2
2,764,480	+				+0.8
2,764,481	-				-0.3
2,764,481	-				+0.8
2,764,481	-				+1.3
2,764,481	-				-0.5
2,764,481	-				-0.6
2,764,481	-				-0.3
2,764,481	-				+0.1
2,764,481	-				+0.3
2,764,541	-				+1.0
2,764,549	-				-0.0
2,764,549	-				+0.2
2,764,782	+		AO356_12150	0.30	-0.7
2,764,782	+		AO356_12150	0.30	-0.8
2,764,782	+		AO356_12150	0.30	+0.1
2,764,782	+		AO356_12150	0.30	+0.4
2,764,783	-		AO356_12150	0.30	-0.7
2,764,783	-		AO356_12150	0.30	+0.3
2,764,783	-		AO356_12150	0.30	-0.3
2,764,887	+		AO356_12150	0.40	+0.3
2,764,887	+		AO356_12150	0.40	+0.9
2,764,887	+		AO356_12150	0.40	+1.1
2,764,888	-		AO356_12150	0.40	+0.7
2,764,893	+		AO356_12150	0.41	+0.0
2,764,945	-		AO356_12150	0.46	+0.3
2,764,945	-		AO356_12150	0.46	+1.1
2,765,016	+		AO356_12150	0.53	-0.6
2,765,016	+		AO356_12150	0.53	+0.3
2,765,017	-		AO356_12150	0.53	-0.8
2,765,077	-		AO356_12150	0.59	+1.1
2,765,077	-		AO356_12150	0.59	+0.1
2,765,077	-		AO356_12150	0.59	+0.5
2,765,077	-		AO356_12150	0.59	-0.1
2,765,079	+		AO356_12150	0.59	+0.4
2,765,079	+		AO356_12150	0.59	+0.7
2,765,079	+		AO356_12150	0.59	-0.1
2,765,080	-		AO356_12150	0.59	-0.2
2,765,080	-		AO356_12150	0.59	-0.1
2,765,080	-		AO356_12150	0.59	+0.3
2,765,346	+		AO356_12150	0.86	+0.2
2,765,346	+		AO356_12150	0.86	-1.0
2,765,346	+		AO356_12150	0.86	+1.4
2,765,346	+		AO356_12150	0.86	+0.0
2,765,347	-		AO356_12150	0.86	+0.9
2,765,347	-		AO356_12150	0.86	+0.2
2,765,511	+				-0.5
2,765,511	+				+0.6
2,765,511	+				-0.1
2,765,511	+				-0.2
2,765,511	+				-0.4
2,765,512	-				+0.4
2,765,512	-				+0.7
2,765,512	-				-0.4