Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12130

Experiment: Vanillin 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2.5 mM
2,759,328	+		AO356_12125	0.39	+0.6
2,759,328	+		AO356_12125	0.39	+0.2
2,759,329	-		AO356_12125	0.39	+0.5
2,759,329	-		AO356_12125	0.39	+1.4
2,759,329	-		AO356_12125	0.39	-1.2
2,759,514	+		AO356_12125	0.51	-0.0
2,759,514	+		AO356_12125	0.51	+0.3
2,759,514	+		AO356_12125	0.51	+0.7
2,759,514	+		AO356_12125	0.51	+2.1
2,759,514	+		AO356_12125	0.51	-0.2
2,759,515	-		AO356_12125	0.51	-0.0
2,759,515	-		AO356_12125	0.51	+0.2
2,759,515	-		AO356_12125	0.51	+0.2
2,759,550	+		AO356_12125	0.53	-0.3
2,759,550	+		AO356_12125	0.53	-0.5
2,759,550	+		AO356_12125	0.53	-0.5
2,759,551	-		AO356_12125	0.53	+0.6
2,759,551	-		AO356_12125	0.53	+0.1
2,759,582	+		AO356_12125	0.55	+0.2
2,759,583	-		AO356_12125	0.55	-0.4
2,759,583	-		AO356_12125	0.55	+0.3
2,759,583	-		AO356_12125	0.55	+1.3
2,759,583	-		AO356_12125	0.55	-0.0
2,759,583	-		AO356_12125	0.55	+1.2
2,759,583	-		AO356_12125	0.55	-0.9
2,759,609	+		AO356_12125	0.57	-0.4
2,759,610	-		AO356_12125	0.57	-0.1
2,759,749	-		AO356_12125	0.66	+0.1
2,759,797	+		AO356_12125	0.69	-0.0
2,759,798	-		AO356_12125	0.69	+0.2
2,760,004	+		AO356_12125	0.82	+0.5
2,760,005	-		AO356_12125	0.82	-1.0
2,760,068	+		AO356_12125	0.87	-0.4
2,760,068	+		AO356_12125	0.87	+0.4
2,760,068	+		AO356_12125	0.87	+0.4
2,760,069	-		AO356_12125	0.87	+0.2
2,760,069	-		AO356_12125	0.87	+0.1
2,760,096	+		AO356_12125	0.88	+0.4
2,760,097	-		AO356_12125	0.88	+0.6
2,760,097	-		AO356_12125	0.88	+0.9
2,760,210	+				-1.1
2,760,210	+				-0.9
2,760,210	+				+0.8
2,760,210	+				-0.7
2,760,210	+				+0.2
2,760,211	-				+0.2
2,760,211	-				+0.4
2,760,211	-				+0.6
2,760,211	-				+0.5
2,760,211	-				-0.9
2,760,275	+				-2.5
2,760,275	+				-0.4
2,760,275	+				+1.1
2,760,276	-				+0.6
2,760,276	-				-0.8
2,760,297	+				+0.4
2,760,298	-				+0.4
2,760,336	+				-0.8
2,760,337	-				+0.1
2,760,427	+		AO356_12130	0.23	+0.5
2,760,427	+		AO356_12130	0.23	+1.7
2,760,427	+		AO356_12130	0.23	-0.2
2,760,427	+		AO356_12130	0.23	+0.2
2,760,428	-		AO356_12130	0.23	-0.5
2,760,428	-		AO356_12130	0.23	+0.3
2,760,428	-		AO356_12130	0.23	+0.3
2,760,428	-		AO356_12130	0.23	-0.4
2,760,428	-		AO356_12130	0.23	-0.5
2,760,428	-		AO356_12130	0.23	+1.1
2,760,428	-		AO356_12130	0.23	+0.9
2,760,428	-		AO356_12130	0.23	+0.8
2,760,428	-		AO356_12130	0.23	-1.3
2,760,428	-		AO356_12130	0.23	-0.0
2,760,568	-		AO356_12130	0.51	+0.5
2,760,584	+		AO356_12130	0.54	+1.5
2,760,585	-		AO356_12130	0.55	-0.1
2,760,642	-		AO356_12130	0.66	-0.5
2,760,723	+		AO356_12130	0.82	+0.7
2,760,724	-		AO356_12130	0.82	+1.6
2,760,724	-		AO356_12130	0.82	-0.1
2,760,844	+				+0.2
2,760,855	+				+1.1
2,760,855	+				-0.1
2,760,855	+				+0.0
2,760,855	+				+0.2
2,760,855	+				-0.8
2,760,856	-				-1.6
2,760,856	-				+1.2
2,760,856	-				-0.5
2,760,885	-				+0.1
2,760,885	-				+0.4
2,760,885	-				+0.2
2,760,941	+				+0.4
2,760,942	-				-0.2
2,760,942	-				+0.3
2,760,942	-				-0.1
2,760,942	-				-0.4
2,760,964	-				-0.3
2,761,176	+		AO356_12135	0.23	-0.0
2,761,176	+		AO356_12135	0.23	-0.1
2,761,177	-		AO356_12135	0.23	-0.3
2,761,177	-		AO356_12135	0.23	-0.4
2,761,253	+		AO356_12135	0.28	+0.2
2,761,253	+		AO356_12135	0.28	+0.5
2,761,253	+		AO356_12135	0.28	-0.5
2,761,253	+		AO356_12135	0.28	+0.7
2,761,254	-		AO356_12135	0.28	-1.3
2,761,261	+		AO356_12135	0.29	-0.2
2,761,261	+		AO356_12135	0.29	+0.5
2,761,261	+		AO356_12135	0.29	+1.2
2,761,261	+		AO356_12135	0.29	+0.1
2,761,261	+		AO356_12135	0.29	+1.6
2,761,261	+		AO356_12135	0.29	+0.7
2,761,261	+		AO356_12135	0.29	+0.5
2,761,261	+		AO356_12135	0.29	+0.1
2,761,261	+		AO356_12135	0.29	-1.1
2,761,261	+		AO356_12135	0.29	+0.3
2,761,261	+		AO356_12135	0.29	-0.0
2,761,261	+		AO356_12135	0.29	-0.2
2,761,261	+		AO356_12135	0.29	+1.1
2,761,261	+		AO356_12135	0.29	+0.6
2,761,261	+		AO356_12135	0.29	+1.2
2,761,261	+		AO356_12135	0.29	-0.0
2,761,261	+		AO356_12135	0.29	-0.6
2,761,261	+		AO356_12135	0.29	+0.3
2,761,261	+		AO356_12135	0.29	-0.4
2,761,261	+		AO356_12135	0.29	+0.5
2,761,262	-		AO356_12135	0.29	+0.3
2,761,262	-		AO356_12135	0.29	-0.4
2,761,262	-		AO356_12135	0.29	-0.0
2,761,262	-		AO356_12135	0.29	+0.4
2,761,262	-		AO356_12135	0.29	+0.0
2,761,262	-		AO356_12135	0.29	-0.4
2,761,262	-		AO356_12135	0.29	+0.4
2,761,265	+		AO356_12135	0.29	-0.0
2,761,265	+		AO356_12135	0.29	-0.1
2,761,265	+		AO356_12135	0.29	-0.5
2,761,266	-		AO356_12135	0.29	+0.0
2,761,266	-		AO356_12135	0.29	-0.6
2,761,266	-		AO356_12135	0.29	-0.3
2,761,266	-		AO356_12135	0.29	+0.4
2,761,266	-		AO356_12135	0.29	-1.2
2,761,266	-		AO356_12135	0.29	+0.5
2,761,266	-		AO356_12135	0.29	+0.1
2,761,266	-		AO356_12135	0.29	-0.7
2,761,266	-		AO356_12135	0.29	+0.5
2,761,266	-		AO356_12135	0.29	+0.5
2,761,266	-		AO356_12135	0.29	-0.4
2,761,266	-		AO356_12135	0.29	+0.2
2,761,266	-		AO356_12135	0.29	-0.0
2,761,278	-		AO356_12135	0.30	+0.4
2,761,322	+		AO356_12135	0.33	-0.1
2,761,322	+		AO356_12135	0.33	+0.2
2,761,323	-		AO356_12135	0.33	+0.2
2,761,323	-		AO356_12135	0.33	+0.4
2,761,323	-		AO356_12135	0.33	+0.3
2,761,323	-		AO356_12135	0.33	+0.8
2,761,323	-		AO356_12135	0.33	-1.0
2,761,323	-		AO356_12135	0.33	-0.9
2,761,323	-		AO356_12135	0.33	-0.3
2,761,323	-		AO356_12135	0.33	+0.2
2,761,323	-		AO356_12135	0.33	+1.3
2,761,364	+		AO356_12135	0.36	+0.1
2,761,364	+		AO356_12135	0.36	+0.8
2,761,364	+		AO356_12135	0.36	+0.4
2,761,364	+		AO356_12135	0.36	+0.5
2,761,364	+		AO356_12135	0.36	+0.9
2,761,364	+		AO356_12135	0.36	+0.4
2,761,364	+		AO356_12135	0.36	-0.2
2,761,365	-		AO356_12135	0.36	-0.0
2,761,365	-		AO356_12135	0.36	-1.5
2,761,365	-		AO356_12135	0.36	+0.2
2,761,365	-		AO356_12135	0.36	-0.2
2,761,580	+		AO356_12135	0.50	+1.2
2,761,581	-		AO356_12135	0.50	-0.1
2,761,581	-		AO356_12135	0.50	+0.1
2,761,616	+		AO356_12135	0.53	+0.5
2,761,616	+		AO356_12135	0.53	-0.2
2,761,616	+		AO356_12135	0.53	-0.3
2,761,616	+		AO356_12135	0.53	+1.0
2,761,617	-		AO356_12135	0.53	+0.1
2,761,617	-		AO356_12135	0.53	-0.7
2,761,617	-		AO356_12135	0.53	-2.8
2,761,617	-		AO356_12135	0.53	-0.4
2,761,650	-		AO356_12135	0.55	-0.4
2,761,650	-		AO356_12135	0.55	+1.4
2,761,650	-		AO356_12135	0.55	+1.0
2,761,670	+		AO356_12135	0.56	+0.9
2,761,670	+		AO356_12135	0.56	+1.7
2,761,670	+		AO356_12135	0.56	+0.6