Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05620

Experiment: H2 deepwell acetate and vitamin FREE

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	H2 deepwell acetate and vitamin FREE
1,077,476	+				+1.4
1,077,476	+				+0.1
1,077,485	-				-0.1
1,077,492	-				+0.1
1,077,493	+				+1.3
1,077,493	+				+0.5
1,077,496	+				-0.2
1,077,524	+				+0.2
1,077,559	-				+0.2
1,077,586	+		MMP_RS05615	0.12	-0.6
1,077,602	-		MMP_RS05615	0.14	+0.5
1,077,611	-		MMP_RS05615	0.15	+0.2
1,077,700	-		MMP_RS05615	0.24	-1.1
1,077,701	+		MMP_RS05615	0.24	+1.0
1,077,701	+		MMP_RS05615	0.24	-0.1
1,077,701	+		MMP_RS05615	0.24	-0.3
1,077,701	+		MMP_RS05615	0.24	-0.2
1,077,702	-		MMP_RS05615	0.24	+0.6
1,077,702	-		MMP_RS05615	0.24	+1.2
1,077,702	-		MMP_RS05615	0.24	+0.1
1,077,702	-		MMP_RS05615	0.24	+1.2
1,077,702	-		MMP_RS05615	0.24	+0.4
1,077,703	+		MMP_RS05615	0.25	-0.3
1,077,703	+		MMP_RS05615	0.25	+0.3
1,077,703	+		MMP_RS05615	0.25	+0.0
1,077,713	+		MMP_RS05615	0.26	-0.9
1,077,819	+		MMP_RS05615	0.37	+1.0
1,077,848	+		MMP_RS05615	0.40	-0.7
1,077,849	-		MMP_RS05615	0.40	-2.1
1,077,849	-		MMP_RS05615	0.40	+0.0
1,077,849	-		MMP_RS05615	0.40	-1.5
1,077,851	-		MMP_RS05615	0.40	+0.6
1,077,852	+		MMP_RS05615	0.40	+0.2
1,077,856	-		MMP_RS05615	0.40	+0.3
1,077,861	+		MMP_RS05615	0.41	-1.0
1,077,869	+		MMP_RS05615	0.42	-1.7
1,077,872	-		MMP_RS05615	0.42	+0.6
1,077,873	+		MMP_RS05615	0.42	-0.1
1,077,905	-		MMP_RS05615	0.45	-0.1
1,077,926	+		MMP_RS05615	0.48	+2.7
1,077,953	+		MMP_RS05615	0.50	-0.0
1,077,964	+		MMP_RS05615	0.52	+3.2
1,078,012	-		MMP_RS05615	0.57	-0.3
1,078,013	+		MMP_RS05615	0.57	+0.1
1,078,088	+		MMP_RS05615	0.64	+1.6
1,078,184	-		MMP_RS05615	0.74	+0.7
1,078,211	-		MMP_RS05615	0.77	+0.4
1,078,212	+		MMP_RS05615	0.77	-0.1
1,078,354	-				-0.3
1,078,359	-				-0.6
1,078,393	-				+1.3
1,078,397	+				+2.2
1,078,401	+				-0.3
1,078,433	+				+0.5
1,078,441	-				+0.3
1,078,442	+				+2.0
1,078,443	-				-0.3
1,078,443	-				-2.1
1,078,443	-				-0.7
1,078,443	-				-1.1
1,078,443	-				-0.5
1,078,443	-				+0.2
1,078,444	+				+0.5
1,078,444	+				+0.8
1,078,444	+				+0.9
1,078,444	+				+1.6
1,078,444	+				+0.8
1,078,444	+				-1.6
1,078,444	+				+1.2
1,078,446	-				+1.0
1,078,446	-				+0.3
1,078,446	-				+1.1
1,078,447	+				+1.4
1,078,447	+				-0.6
1,078,447	+				+0.6
1,078,447	+				+1.0
1,078,451	+				-0.9
1,078,463	-				-0.4
1,078,475	-				+0.5
1,078,475	-				-0.2
1,078,480	+				+1.8
1,078,480	+				+0.9
1,078,594	-		MMP_RS05620	0.11	+1.1
1,078,657	+		MMP_RS05620	0.17	-1.4
1,078,668	-		MMP_RS05620	0.19	-1.0
1,078,711	-		MMP_RS05620	0.23	-1.3
1,078,711	-		MMP_RS05620	0.23	+0.7
1,078,711	-		MMP_RS05620	0.23	+0.0
1,078,711	-		MMP_RS05620	0.23	+0.7
1,078,712	+		MMP_RS05620	0.23	+0.3
1,078,712	+		MMP_RS05620	0.23	-1.1
1,078,712	+		MMP_RS05620	0.23	-0.3
1,078,751	-		MMP_RS05620	0.26	-1.0
1,078,762	+		MMP_RS05620	0.28	-1.0
1,078,762	+		MMP_RS05620	0.28	-1.9
1,078,771	-		MMP_RS05620	0.28	+0.5
1,078,772	+		MMP_RS05620	0.28	+1.6
1,078,773	-		MMP_RS05620	0.29	+0.4
1,078,777	+		MMP_RS05620	0.29	-0.8
1,078,803	+		MMP_RS05620	0.31	+0.5
1,078,842	-		MMP_RS05620	0.35	-0.6
1,078,867	+		MMP_RS05620	0.38	-1.1
1,078,898	-		MMP_RS05620	0.40	-1.4
1,078,995	-		MMP_RS05620	0.50	-0.7
1,079,011	-		MMP_RS05620	0.51	+0.1
1,079,012	+		MMP_RS05620	0.51	+0.3
1,079,012	+		MMP_RS05620	0.51	-0.1
1,079,024	+		MMP_RS05620	0.53	-2.7
1,079,062	-		MMP_RS05620	0.56	+1.1
1,079,062	-		MMP_RS05620	0.56	-0.9
1,079,062	-		MMP_RS05620	0.56	-2.5
1,079,063	+		MMP_RS05620	0.56	+0.1
1,079,063	+		MMP_RS05620	0.56	+1.4
1,079,063	+		MMP_RS05620	0.56	-1.3
1,079,087	+		MMP_RS05620	0.59	-1.1
1,079,094	+		MMP_RS05620	0.59	-1.1
1,079,175	-		MMP_RS05620	0.67	+0.4
1,079,176	+		MMP_RS05620	0.67	+0.3
1,079,214	-		MMP_RS05620	0.71	-2.1
1,079,236	-		MMP_RS05620	0.73	+0.1
1,079,237	+		MMP_RS05620	0.73	-0.5
1,079,279	+		MMP_RS05620	0.77	+0.2
1,079,302	+		MMP_RS05620	0.79	+0.3
1,079,325	-		MMP_RS05620	0.81	-0.7
1,079,325	-		MMP_RS05620	0.81	-0.5
1,079,326	+		MMP_RS05620	0.81	+1.4
1,079,326	+		MMP_RS05620	0.81	-0.3
1,079,327	-		MMP_RS05620	0.81	-0.2
1,079,328	+		MMP_RS05620	0.82	+0.4
1,079,328	+		MMP_RS05620	0.82	-2.4
1,079,328	+		MMP_RS05620	0.82	+0.7
1,079,328	+		MMP_RS05620	0.82	+0.9
1,079,399	-		MMP_RS05620	0.88	-0.4
1,079,412	-		MMP_RS05620	0.90	+0.3
1,079,413	+		MMP_RS05620	0.90	+0.2
1,079,423	+				+0.3
1,079,423	+				+0.9
1,079,423	+				+0.4
1,079,428	+				-1.0
1,079,444	-				+1.7
1,079,444	-				+1.4
1,079,445	+				+0.7
1,079,520	-				+0.6
1,079,520	-				+0.7
1,079,521	+				+0.4
1,079,521	+				-0.2
1,079,523	-				-0.7
1,079,524	+				-0.3
1,079,533	-				-0.3
1,079,534	+				+0.3
1,079,534	+				+2.1
1,079,536	-				+0.5
1,079,537	+				+0.7
1,079,537	+				+1.5
1,079,545	-				-0.1
1,079,571	+				-0.5
1,079,571	+				-0.5
1,079,585	-				-1.5
1,079,585	-				-0.1
1,079,586	+				+1.0
1,079,589	+				+0.1
1,079,591	+				+0.9
1,079,591	+				+0.1
1,079,591	+				-1.6
1,079,599	+				-0.5
1,079,599	+				+1.9
1,079,653	+				-0.1
1,079,653	+				+0.7
1,079,653	+				+0.1
1,079,749	+		MMP_RS05625	0.11	-1.2
1,079,755	-		MMP_RS05625	0.11	+0.0
1,079,818	-		MMP_RS05625	0.16	-0.4
1,079,827	-		MMP_RS05625	0.17	+0.0
1,079,828	-		MMP_RS05625	0.17	-0.1
1,079,843	-		MMP_RS05625	0.18	-0.3
1,079,850	+		MMP_RS05625	0.19	-0.0
1,079,930	-		MMP_RS05625	0.26	+0.1
1,079,930	-		MMP_RS05625	0.26	-1.0
1,079,931	+		MMP_RS05625	0.26	-0.1
1,079,933	+		MMP_RS05625	0.26	-0.7
1,079,950	+		MMP_RS05625	0.27	-0.8
1,079,953	-		MMP_RS05625	0.28	-0.3
1,079,953	-		MMP_RS05625	0.28	+1.0
1,079,953	-		MMP_RS05625	0.28	-4.6
1,079,979	-		MMP_RS05625	0.30	+0.1
1,079,980	+		MMP_RS05625	0.30	+0.5
1,079,996	+		MMP_RS05625	0.31	-0.8
1,079,996	+		MMP_RS05625	0.31	-0.9
1,080,027	-		MMP_RS05625	0.34	+0.3
1,080,087	-		MMP_RS05625	0.39	+0.5
1,080,101	+		MMP_RS05625	0.40	+0.7
1,080,141	-		MMP_RS05625	0.43	+0.0
1,080,280	+		MMP_RS05625	0.55	-0.3
1,080,303	-		MMP_RS05625	0.57	+1.1
1,080,303	-		MMP_RS05625	0.57	-0.2
1,080,306	-		MMP_RS05625	0.57	-1.0
1,080,309	-		MMP_RS05625	0.57	-0.3
1,080,309	-		MMP_RS05625	0.57	+1.1
1,080,309	-		MMP_RS05625	0.57	-1.3
1,080,310	+		MMP_RS05625	0.57	-1.7
1,080,310	+		MMP_RS05625	0.57	+0.3
1,080,325	+		MMP_RS05625	0.59	-0.3
1,080,345	-		MMP_RS05625	0.60	+1.6
1,080,346	+		MMP_RS05625	0.60	+0.1
1,080,350	+		MMP_RS05625	0.61	-1.1
1,080,351	-		MMP_RS05625	0.61	+0.0
1,080,351	-		MMP_RS05625	0.61	-1.8
1,080,352	+		MMP_RS05625	0.61	+1.0
1,080,352	+		MMP_RS05625	0.61	-2.4
1,080,356	+		MMP_RS05625	0.61	-0.9
1,080,372	-		MMP_RS05625	0.62	+0.6
1,080,399	-		MMP_RS05625	0.65	+0.3
1,080,399	-		MMP_RS05625	0.65	+0.3
1,080,399	-		MMP_RS05625	0.65	+0.6
1,080,400	+		MMP_RS05625	0.65	+0.2
1,080,401	-		MMP_RS05625	0.65	-0.0
1,080,401	-		MMP_RS05625	0.65	+1.2
1,080,402	+		MMP_RS05625	0.65	-0.1
1,080,405	-		MMP_RS05625	0.65	+0.5
1,080,409	+		MMP_RS05625	0.66	-0.8
1,080,438	-		MMP_RS05625	0.68	-2.3
1,080,475	-		MMP_RS05625	0.71	-1.6